Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2330 Ceratophyllum demersum HOM05D005400 ORTHO05D006668 3.7e-67 258.1 131 100.0
CDE03G0155 Ceratophyllum demersum HOM05D005400 ORTHO05D006668 6.2e-46 187.6 104 88.5
MBI06_g29320_MAGBIO Magnolia biondii HOM05D005400 ORTHO05D006668 3.6e-38 161.8 106 69.8
Aa31LG3G9160 Aethionema arabicum HOM05D005400 ORTHO05D006668 3.8e-35 151.8 105 66.7
Nn1g01753 Nelumbo nucifera HOM05D005400 ORTHO05D006668 4.9e-35 151.4 106 67.0
QL09p011755 Quercus lobata HOM05D005400 ORTHO05D006668 4.9e-35 151.4 105 68.6
AT5G52910 Arabidopsis thaliana HOM05D005400 ORTHO05D006668 8.4e-35 150.6 105 67.6
Atru.BG.163.p Acer truncatum HOM05D005400 ORTHO05D006668 1.4e-34 149.8 105 68.6
Atru.chr1.311 Acer truncatum HOM05D005400 ORTHO05D006668 1.4e-34 149.8 105 68.6
AL8G27410 Arabidopsis lyrata HOM05D005400 ORTHO05D006668 1.9e-34 149.4 105 66.7
Lalb_Chr06g0161421 Lupinus albus HOM05D005400 ORTHO05D006668 1.9e-34 149.4 105 66.7
Sp6g15090 Schrenkiella parvula HOM05D005400 ORTHO05D006668 2.4e-34 149.1 105 65.7
CANSAT21G0517 Cannabis sativa HOM05D005400 ORTHO05D006668 3.2e-34 148.7 105 64.8
Cfa016337 Carpinus fangiana HOM05D005400 ORTHO05D006668 3.2e-34 148.7 106 67.0
arahy.Tifrunner.gnm1.ann1.E9FCC2 Arachis hypogaea HOM05D005400 ORTHO05D006668 4.2e-34 148.3 105 68.6
Thhalv10012488m.g Eutrema salsugineum HOM05D005400 ORTHO05D006668 5.4e-34 147.9 105 64.8
HanXRQChr05g0158761 Helianthus annuus HOM05D005400 ORTHO05D006668 5.4e-34 147.9 105 64.8
Os05g0210500 Oryza sativa ssp. japonica HOM05D005400 ORTHO05D006668 9.3e-34 147.1 106 63.2
arahy.Tifrunner.gnm1.ann1.B3EP0P Arachis hypogaea HOM05D005400 ORTHO05D006668 1.2e-33 146.7 104 68.3
BcaB08g35655 Brassica carinata HOM05D005400 ORTHO05D006668 1.6e-33 146.4 105 63.8
Rhsim03G0196700 Rhododendron simsii HOM05D005400 ORTHO05D006668 1.6e-33 146.4 106 64.2
TWI14G1289 Tripterygium wilfordii HOM05D005400 ORTHO05D006668 1.6e-33 146.4 107 62.6
Gohir.D12G254600 Gossypium hirsutum HOM05D005400 ORTHO05D006668 2.1e-33 146.0 105 66.7
Lsat_1_v5_gn_5_37621 Lactuca sativa HOM05D005400 ORTHO05D006668 2.1e-33 146.0 105 63.8
VMungo0720G2624 Vigna mungo HOM05D005400 ORTHO05D006668 2.1e-33 146.0 106 65.1
Duzib205G0693 Durio zibethinus HOM05D005400 ORTHO05D006668 2.7e-33 145.6 105 65.7
ATR0721G161 Amborella trichopoda HOM05D005400 ORTHO05D006668 3.5e-33 145.2 105 64.8
Dinv35292 Davidia involucrata HOM05D005400 ORTHO05D006668 3.5e-33 145.2 106 64.2
Lj5g0007861 Lotus japonicus HOM05D005400 ORTHO05D006668 3.5e-33 145.2 105 63.8
Cc02_g02120 Coffea canephora HOM05D005400 ORTHO05D006668 4.6e-33 144.8 105 63.8
Psat6g194880 Pisum sativum HOM05D005400 ORTHO05D006668 4.6e-33 144.8 105 61.9
CiPaw.05G259500 Carya illinoinensis HOM05D005400 ORTHO05D006668 6.0e-33 144.4 105 66.7
Glyma.20G164400 Glycine max HOM05D005400 ORTHO05D006668 6.0e-33 144.4 106 65.1
THA.LOC104811936 Tarenaya hassleriana HOM05D005400 ORTHO05D006668 6.0e-33 144.4 105 64.8
vmacro06593 Vaccinium macrocarpon HOM05D005400 ORTHO05D006668 6.0e-33 144.4 106 63.2
Zm00001eb296310 Zea mays HOM05D005400 ORTHO05D006668 6.0e-33 144.4 106 62.3
Glyma.10G227900 Glycine max HOM05D005400 ORTHO05D006668 7.9e-33 144.1 106 65.1
Gorai.008G272300 Gossypium raimondii HOM05D005400 ORTHO05D006668 7.9e-33 144.1 105 65.7
SEGI_11166 Sequoiadendron giganteum HOM05D005400 ORTHO05D006668 7.9e-33 144.1 107 62.6
GSVIVG01028757001 Vitis vinifera HOM05D005400 ORTHO05D006668 7.9e-33 144.1 105 64.8
Carub.0008s1311 Capsella rubella HOM05D005400 ORTHO05D006668 1.0e-32 143.7 105 63.8
Thecc.03G189100 Theobroma cacao HOM05D005400 ORTHO05D006668 1.0e-32 143.7 105 64.8
TPR.G7748 Trifolium pratense HOM05D005400 ORTHO05D006668 1.3e-32 143.3 105 62.9
MSTRG.27059 Avicennia marina HOM05D005400 ORTHO05D006668 1.7e-32 142.9 104 65.4
A10p10420 Brassica napus HOM05D005400 ORTHO05D006668 1.7e-32 142.9 105 62.9
BraA10t43124Z Brassica rapa HOM05D005400 ORTHO05D006668 1.7e-32 142.9 105 62.9
Ciclev10004177m.g Citrus clementina HOM05D005400 ORTHO05D006668 1.7e-32 142.9 105 65.7
Manes.06G155000 Manihot esculenta HOM05D005400 ORTHO05D006668 1.7e-32 142.9 107 62.6
Phvul.007G077600 Phaseolus vulgaris HOM05D005400 ORTHO05D006668 1.7e-32 142.9 105 65.7
HPP92_007648 Vanilla planifolia HOM05D005400 ORTHO05D006668 1.7e-32 142.9 106 61.3
PGR042G3191 Punica granatum HOM05D005400 ORTHO05D006668 2.3e-32 142.5 105 64.8
FvH4_7g30740 Fragaria vesca HOM05D005400 ORTHO05D006668 3.0e-32 142.1 105 61.9
MD01G1212700 Malus domestica HOM05D005400 ORTHO05D006668 3.0e-32 142.1 106 62.3
COL.COLO4_30250 Corchorus olitorius HOM05D005400 ORTHO05D006668 3.9e-32 141.7 105 63.8
CARHR265900 Cardamine hirsuta HOM05D005400 ORTHO05D006668 5.1e-32 141.4 105 62.9
AUR62021073 Chenopodium quinoa HOM05D005400 ORTHO05D006668 8.7e-32 140.6 105 64.8
ClCG01G000730 Citrullus lanatus HOM05D005400 ORTHO05D006668 8.7e-32 140.6 105 61.9
Oeu037127.2 Olea europaea HOM05D005400 ORTHO05D006668 8.7e-32 140.6 105 61.9
PSO170G5128 Papaver somniferum HOM05D005400 ORTHO05D006668 8.7e-32 140.6 106 63.2
SalBow4G2614 Salvia bowleyana HOM05D005400 ORTHO05D006668 8.7e-32 140.6 105 61.9
Medtr1g099370 Medicago truncatula HOM05D005400 ORTHO05D006668 1.1e-31 140.2 105 60.0
Sed0025455 Sechium edule HOM05D005400 ORTHO05D006668 1.1e-31 140.2 105 61.9
BcaC04g20520 Brassica carinata HOM05D005400 ORTHO05D006668 1.5e-31 139.8 106 62.3
C09p42650 Brassica napus HOM05D005400 ORTHO05D006668 1.5e-31 139.8 106 62.3
BolC9t57141H Brassica oleracea HOM05D005400 ORTHO05D006668 1.5e-31 139.8 106 62.3
CsaV3_5G000860 Cucumis sativus L. HOM05D005400 ORTHO05D006668 2.5e-31 139.0 105 61.9
Eucgr.A02677 Eucalyptus grandis HOM05D005400 ORTHO05D006668 2.5e-31 139.0 105 61.9
RcHm_v2.0_Chr1g0379691 Rosa chinensis HOM05D005400 ORTHO05D006668 2.5e-31 139.0 105 61.0
Sabra15G0018800 Salix brachista HOM05D005400 ORTHO05D006668 2.5e-31 139.0 108 63.0
Sabra15G0021300 Salix brachista HOM05D005400 ORTHO05D006668 2.5e-31 139.0 108 63.0
CAN.G108.2 Capsicum annuum HOM05D005400 ORTHO05D006668 3.3e-31 138.7 104 62.5
Hund04816 Selenicereus undatus HOM05D005400 ORTHO05D006668 3.3e-31 138.7 105 62.9
Sopen03g003730 Solanum pennellii HOM05D005400 ORTHO05D006668 3.3e-31 138.7 104 62.5
PGSC0003DMG400006589 Solanum tuberosum HOM05D005400 ORTHO05D006668 3.3e-31 138.7 104 62.5
Aqoxy5G04046 Aquilegia oxysepala HOM05D005400 ORTHO05D006668 4.3e-31 138.3 106 59.4
AUR62031458 Chenopodium quinoa HOM05D005400 ORTHO05D006668 4.3e-31 138.3 105 62.9
EL10Ac3g05372 Beta vulgaris HOM05D005400 ORTHO05D006668 5.6e-31 137.9 105 63.8
Potri.015G024300 Populus trichocarpa HOM05D005400 ORTHO05D006668 5.6e-31 137.9 108 62.0
ECA246G1245 Erigeron canadensis HOM05D005400 ORTHO05D006668 7.4e-31 137.5 104 61.5
Migut.F00258 Erythranthe guttata HOM05D005400 ORTHO05D006668 7.4e-31 137.5 105 61.0
Solyc03g007800.3 Solanum lycopersicum HOM05D005400 ORTHO05D006668 9.6e-31 137.1 104 61.5
Actinidia34175 Actinidia chinensis HOM05D005400 ORTHO05D006668 1.3e-30 136.7 105 60.0
MELO3C005855.2 Cucumis melo HOM05D005400 ORTHO05D006668 1.3e-30 136.7 105 61.9
Hma1.2p1_0142F.1_g064180 Hydrangea macrophylla HOM05D005400 ORTHO05D006668 1.3e-30 136.7 106 60.4
Hma1.2p1_0142F.1_g064190 Hydrangea macrophylla HOM05D005400 ORTHO05D006668 1.3e-30 136.7 106 60.4
SGA_v2.0_scaffold44G16767 Striga asiatica HOM05D005400 ORTHO05D006668 2.1e-30 136.0 104 60.6
Sc13g0009410 Simmondsia chinensis HOM05D005400 ORTHO05D006668 2.8e-30 135.6 106 61.3
TAR374G0725 Trochodendron aralioides HOM05D005400 ORTHO05D006668 2.8e-30 135.6 106 62.3
Cpa.g.sc3.16 Carica papaya HOM05D005400 ORTHO05D006668 3.6e-30 135.2 93 66.7
DCAR_020293 Daucus carota HOM05D005400 ORTHO05D006668 6.2e-30 134.4 105 60.0
FAN03G3290 Fragaria x ananassa HOM05D005400 ORTHO05D006668 1.5e-28 129.8 105 59.0
FAN06G4050 Fragaria x ananassa HOM05D005400 ORTHO05D006668 3.4e-28 128.6 105 58.1
FAN06G5036 Fragaria x ananassa HOM05D005400 ORTHO05D006668 3.4e-28 128.6 105 58.1
Lj3C915T0 Lonicera japonica HOM05D005400 ORTHO05D006668 3.4e-28 128.6 106 58.5
Peaxi162Scf00904g00467 Petunia axillaris HOM05D005400 ORTHO05D006668 7.6e-28 127.5 99 58.6
Pp3c8_21590 Physcomitrium patens HOM05D005400 ORTHO05D006668 1.6e-25 119.8 103 54.4
AagrBONN_evm.TU.Sc2ySwM_362.1589 Anthoceros agrestis HOM05D005400 ORTHO05D006668 1.8e-24 116.3 105 51.4
arahy.Tifrunner.gnm1.ann1.FE5R37 Arachis hypogaea HOM05D005400 ORTHO05D006668 2.3e-24 115.9 98 58.2
FAN01G1802 Fragaria x ananassa HOM05D005400 ORTHO05D006668 1.9e-23 112.8 98 54.1
Nitab4.5_0001748g0020 Nicotiana tabacum HOM05D005400 ORTHO05D006668 3.3e-23 112.1 87 58.6
Nitab4.5_0002340g0020 Nicotiana tabacum HOM05D005400 ORTHO05D006668 3.3e-23 112.1 87 58.6
Mapoly0089s0007 Marchantia polymorpha HOM05D005400 ORTHO05D006668 5.6e-23 111.3 106 47.2
arahy.Tifrunner.gnm1.ann1.3F6PU2 Arachis hypogaea HOM05D005400 ORTHO05D006668 1.6e-22 109.8 85 61.2
FAN10G3192 Fragaria x ananassa HOM05D005400 ORTHO05D006668 1.6e-22 109.8 110 50.9
CBR_g32347 Chara braunii HOM05D000019 ORTHO05D000353 2.1e-22 109.4 105 49.5
CSS0023888 Camellia sinensis var. sinensis HOM05D005400 ORTHO05D006668 2.8e-22 109.0 105 51.4
unitig_46.g18810 Utricularia gibba HOM05D005400 ORTHO05D006668 1.1e-21 107.1 93 54.8
Ca_10700_v3 Cicer arietinum L. HOM05D005400 ORTHO05D006668 2.9e-19 99.0 105 50.5
Haze_00088 Corylus avellana HOM05D005400 ORTHO05D006668 3.8e-19 98.6 106 50.9
SMO353G0144 Selaginella moellendorffii HOM05D005400 ORTHO05D006668 9.6e-15 84.0 106 39.6
Cre06.g284850 Chlamydomonas reinhardtii HOM05D005400 ORTHO05D006668 1.2e-12 77.0 98 38.8
FAN06G3414 Fragaria x ananassa HOM05D005400 ORTHO05D006668 5.9e-12 74.7 115 36.5
FAN06G1858 Fragaria x ananassa HOM05D005400 ORTHO05D006668 3.8e-11 72.0 120 35.8
SHI13743 Sapria himalayana HOM05D005400 ORTHO05D006668 1.9e-10 69.7 52 59.6
Ah.07g206200 Amaranthus hybridus HOM05D005400 ORTHO05D006668 7.9e-09 64.3 75 48.0
Gohir.A12G254700 Gossypium hirsutum HOM05D005400 ORTHO05D006668 1.8e-08 63.2 45 64.4
SHI13742 Sapria himalayana HOM05D005400 ORTHO05D006668 5.1e-08 61.6 50 56.0
Prupe.2G304900 Prunus persica HOM05D005400 ORTHO05D006668 1.5e-07 60.1 45 57.8
arahy.Tifrunner.gnm1.ann1.58WBAP Arachis hypogaea HOM05D005400 ORTHO05D006668 2.8e-06 55.8 98 34.7


User provided reference genes

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