Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2319 Ceratophyllum demersum HOM05D005847 ORTHO05D007143 6.6e-94 347.4 184 100.0
MBI12_g02092_MAGBIO Magnolia biondii HOM05D005847 ORTHO05D007143 3.8e-49 198.7 185 54.6
Nn8g41240 Nelumbo nucifera HOM05D005847 ORTHO05D007143 8.4e-49 197.6 180 55.6
Solyc08g082880.4 Solanum lycopersicum HOM05D005847 ORTHO05D007143 1.2e-47 193.7 184 52.2
Sopen08g031110 Solanum pennellii HOM05D005847 ORTHO05D007143 1.6e-47 193.4 184 52.2
TAR629G2252 Trochodendron aralioides HOM05D005847 ORTHO05D007143 7.9e-47 191.0 184 54.3
GSVIVG01019613001 Vitis vinifera HOM05D005847 ORTHO05D007143 1.0e-46 190.7 180 60.6
Phvul.011G200000 Phaseolus vulgaris HOM05D005847 ORTHO05D007143 1.9e-45 186.4 187 47.1
CAN.G567.67 Capsicum annuum HOM05D005847 ORTHO05D007143 4.3e-45 185.3 180 52.8
PGR042G1950 Punica granatum HOM05D005847 ORTHO05D007143 4.3e-45 185.3 182 53.8
PGSC0003DMG400012250 Solanum tuberosum HOM05D005847 ORTHO05D007143 9.6e-45 184.1 196 48.0
ClCG01G001660 Citrullus lanatus HOM05D005847 ORTHO05D007143 1.3e-44 183.7 180 50.6
EL10Ac5g12470 Beta vulgaris HOM05D005847 ORTHO05D007143 1.6e-44 183.3 183 50.8
Eucgr.E01030 Eucalyptus grandis HOM05D005847 ORTHO05D007143 2.1e-44 183.0 182 51.6
VMungo1127G1163 Vigna mungo HOM05D005847 ORTHO05D007143 2.8e-44 182.6 187 46.5
Cc08_g16520 Coffea canephora HOM05D005847 ORTHO05D007143 3.7e-44 182.2 181 50.3
Lj2A159T44 Lonicera japonica HOM05D005847 ORTHO05D007143 8.1e-44 181.0 187 54.0
Actinidia22190 Actinidia chinensis HOM05D005847 ORTHO05D007143 1.4e-43 180.3 182 51.1
Os07g0297300 Oryza sativa ssp. japonica HOM05D005847 ORTHO05D007143 1.4e-43 180.3 183 49.7
HanXRQChr13g0415001 Helianthus annuus HOM05D005847 ORTHO05D007143 3.1e-43 179.1 188 48.9
MD06G1113800 Malus domestica HOM05D005847 ORTHO05D007143 3.1e-43 179.1 187 50.8
CsaV3_5G001820 Cucumis sativus L. HOM05D005847 ORTHO05D007143 6.9e-43 177.9 180 48.3
Manes.01G053800 Manihot esculenta HOM05D005847 ORTHO05D007143 1.2e-42 177.2 185 48.6
Zm00001eb021260 Zea mays HOM05D005847 ORTHO05D007143 2.0e-42 176.4 178 49.4
Hund18289 Selenicereus undatus HOM05D005847 ORTHO05D007143 2.6e-42 176.0 183 49.7
Aqoxy3G00691 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 3.4e-42 175.6 201 47.8
CANSAT21G1860 Cannabis sativa HOM05D005847 ORTHO05D007143 3.4e-42 175.6 180 47.2
Sc01g0010500 Simmondsia chinensis HOM05D005847 ORTHO05D007143 3.4e-42 175.6 183 49.7
Medtr8g040700 Medicago truncatula HOM05D005847 ORTHO05D007143 5.8e-42 174.9 180 49.4
Prupe.5G126500 Prunus persica HOM05D005847 ORTHO05D007143 5.8e-42 174.9 186 48.9
Sed0023920 Sechium edule HOM05D005847 ORTHO05D007143 5.8e-42 174.9 184 49.5
TPR.G8535 Trifolium pratense HOM05D005847 ORTHO05D007143 1.0e-41 174.1 180 50.6
SGA_v2.0_scaffold159G37696 Striga asiatica HOM05D005847 ORTHO05D007143 1.3e-41 173.7 177 49.7
HPP92_003273 Vanilla planifolia HOM05D005847 ORTHO05D007143 1.3e-41 173.7 180 47.2
Ciclev10019764m.g Citrus clementina HOM05D005847 ORTHO05D007143 1.7e-41 173.3 180 51.1
MELO3C005771.2 Cucumis melo HOM05D005847 ORTHO05D007143 1.7e-41 173.3 178 47.2
QL10p008953 Quercus lobata HOM05D005847 ORTHO05D007143 2.9e-41 172.6 179 48.6
QL10p010267 Quercus lobata HOM05D005847 ORTHO05D007143 2.9e-41 172.6 179 48.6
CiPaw.11G115200 Carya illinoinensis HOM05D005847 ORTHO05D007143 3.8e-41 172.2 181 57.5
MD14G1134800 Malus domestica HOM05D005847 ORTHO05D007143 3.8e-41 172.2 188 48.9
Psat4g194080 Pisum sativum HOM05D005847 ORTHO05D007143 4.9e-41 171.8 178 46.6
Haze_09129 Corylus avellana HOM05D005847 ORTHO05D007143 8.4e-41 171.0 181 53.6
Gohir.D12G239600 Gossypium hirsutum HOM05D005847 ORTHO05D007143 8.4e-41 171.0 185 47.0
Gorai.008G256700 Gossypium raimondii HOM05D005847 ORTHO05D007143 8.4e-41 171.0 185 47.0
DCAR_006499 Daucus carota HOM05D005847 ORTHO05D007143 1.1e-40 170.6 180 47.2
SEGI_09534 Sequoiadendron giganteum HOM05D005847 ORTHO05D007143 1.1e-40 170.6 180 48.3
Ca_24013_v3 Cicer arietinum L. HOM05D005847 ORTHO05D007143 1.4e-40 170.2 187 50.8
Aqoxy5G04298 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 1.9e-40 169.9 180 47.2
MSTRG.15574 Avicennia marina HOM05D005847 ORTHO05D007143 1.9e-40 169.9 191 45.5
Glyma.13G191700 Glycine max HOM05D005847 ORTHO05D007143 1.9e-40 169.9 203 41.4
TWI81G0154 Tripterygium wilfordii HOM05D005847 ORTHO05D007143 2.5e-40 169.5 180 53.3
COL.COLO4_10763 Corchorus olitorius HOM05D005847 ORTHO05D007143 3.2e-40 169.1 186 48.4
Atru.chr9.1922 Acer truncatum HOM05D005847 ORTHO05D007143 4.2e-40 168.7 183 47.5
Lalb_Chr13g0298981 Lupinus albus HOM05D005847 ORTHO05D007143 4.2e-40 168.7 184 53.8
Thecc.03G224700 Theobroma cacao HOM05D005847 ORTHO05D007143 7.1e-40 167.9 186 48.9
Duzib084G0923 Durio zibethinus HOM05D005847 ORTHO05D007143 9.3e-40 167.5 186 47.8
Cfa011951 Carpinus fangiana HOM05D005847 ORTHO05D007143 1.2e-39 167.2 181 50.3
FAN18G1068 Fragaria x ananassa HOM05D005847 ORTHO05D007143 2.1e-39 166.4 183 45.4
Sp2g00130 Schrenkiella parvula HOM05D005847 ORTHO05D007143 4.6e-39 165.2 180 53.9
FAN08G0147 Fragaria x ananassa HOM05D005847 ORTHO05D007143 6.0e-39 164.9 182 45.1
THA.LOC104809314 Tarenaya hassleriana HOM05D005847 ORTHO05D007143 6.0e-39 164.9 181 47.0
Gohir.A12G238500 Gossypium hirsutum HOM05D005847 ORTHO05D007143 7.9e-39 164.5 185 45.4
ATR0757G021 Amborella trichopoda HOM05D005847 ORTHO05D007143 1.0e-38 164.1 174 47.1
RcHm_v2.0_Chr2g0164461 Rosa chinensis HOM05D005847 ORTHO05D007143 1.0e-38 164.1 186 46.8
BcaB07g31478 Brassica carinata HOM05D005847 ORTHO05D007143 1.3e-38 163.7 186 51.6
RcHm_v2.0_Chr7g0186431 Rosa chinensis HOM05D005847 ORTHO05D007143 1.3e-38 163.7 181 47.5
AL2G10160 Arabidopsis lyrata HOM05D005847 ORTHO05D007143 2.3e-38 162.9 180 53.3
A09p14540 Brassica napus HOM05D005847 ORTHO05D007143 2.3e-38 162.9 180 52.8
BraA09t37102Z Brassica rapa HOM05D005847 ORTHO05D007143 2.3e-38 162.9 180 52.8
FAN13G1107 Fragaria x ananassa HOM05D005847 ORTHO05D007143 6.7e-38 161.4 181 51.4
Sabra01G0063100 Salix brachista HOM05D005847 ORTHO05D007143 6.7e-38 161.4 186 45.7
Aa31LG2G1600 Aethionema arabicum HOM05D005847 ORTHO05D007143 1.1e-37 160.6 193 51.3
AT1G64600 Arabidopsis thaliana HOM05D005847 ORTHO05D007143 1.1e-37 160.6 180 53.3
BcaC04g22588 Brassica carinata HOM05D005847 ORTHO05D007143 1.1e-37 160.6 180 52.2
C09p17640 Brassica napus HOM05D005847 ORTHO05D007143 1.1e-37 160.6 180 52.2
BolC9t54656H Brassica oleracea HOM05D005847 ORTHO05D007143 1.1e-37 160.6 180 52.2
CARHR046320 Cardamine hirsuta HOM05D005847 ORTHO05D007143 1.1e-37 160.6 180 52.2
Potri.001G086800 Populus trichocarpa HOM05D005847 ORTHO05D007143 1.1e-37 160.6 185 45.9
FvH4_5g11440 Fragaria vesca HOM05D005847 ORTHO05D007143 2.5e-37 159.5 181 50.3
FAN04G0204 Fragaria x ananassa HOM05D005847 ORTHO05D007143 2.8e-36 156.0 181 49.7
ECA240G1801 Erigeron canadensis HOM05D005847 ORTHO05D007143 1.1e-35 154.1 206 41.7
unitig_21.g20386 Utricularia gibba HOM05D005847 ORTHO05D007143 2.4e-35 152.9 178 43.8
PSO017G1852 Papaver somniferum HOM05D005847 ORTHO05D007143 9.0e-35 151.0 197 46.7
Carub.0002s0014 Capsella rubella HOM05D005847 ORTHO05D007143 1.2e-34 150.6 184 50.5
Migut.E00656 Erythranthe guttata HOM05D005847 ORTHO05D007143 2.6e-34 149.4 200 48.5
Thhalv10023366m.g Eutrema salsugineum HOM05D005847 ORTHO05D007143 5.8e-34 148.3 222 42.8
vmacro11522 Vaccinium macrocarpon HOM05D005847 ORTHO05D007143 2.3e-30 136.3 160 48.1
Peaxi162Scf00074g00363 Petunia axillaris HOM05D005847 ORTHO05D007143 3.9e-30 135.6 179 40.2
Lj1g0001744 Lotus japonicus HOM05D005847 ORTHO05D007143 4.3e-29 132.1 259 38.6
Cpa.g.c33268 Carica papaya HOM05D005847 ORTHO05D007143 5.7e-29 131.7 164 43.9
Ah.12g052990 Amaranthus hybridus HOM05D005847 ORTHO05D007143 6.3e-28 128.3 150 48.7
SMO119G0297 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 6.3e-28 128.3 176 42.6
arahy.Tifrunner.gnm1.ann1.PR6ST2 Arachis hypogaea HOM05D005847 ORTHO05D007143 4.1e-27 125.6 152 47.4
AUR62019891 Chenopodium quinoa HOM05D005847 ORTHO05D007143 2.6e-26 122.9 128 48.4
Atru.chr1.1468 Acer truncatum HOM05D005847 ORTHO05D007143 8.5e-25 117.9 74 67.6
AUR62007027 Chenopodium quinoa HOM05D005847 ORTHO05D007143 8.5e-25 117.9 173 42.8
Mapoly0031s0174 Marchantia polymorpha HOM05D005847 ORTHO05D007143 1.4e-24 117.1 181 38.1
Pp3c9_6890 Physcomitrium patens HOM05D005847 ORTHO05D007143 1.9e-24 116.7 179 39.7
arahy.Tifrunner.gnm1.ann1.HI9AVU Arachis hypogaea HOM05D005847 ORTHO05D007143 1.4e-22 110.5 145 44.1
Oeu058016.1 Olea europaea HOM05D005847 ORTHO05D007143 5.1e-22 108.6 118 44.9
SHI06935 Sapria himalayana HOM05D005847 ORTHO05D007143 6.7e-22 108.2 179 40.8
Nitab4.5_0002027g0040 Nicotiana tabacum HOM05D005847 ORTHO05D007143 9.1e-19 97.8 169 37.3
Nitab4.5_0006880g0020 Nicotiana tabacum HOM05D005847 ORTHO05D007143 8.5e-17 91.3 125 45.6
Rhsim02G0249100 Rhododendron simsii HOM05D005847 ORTHO05D007143 2.5e-16 89.7 140 43.6
CSS0040838 Camellia sinensis var. sinensis HOM05D005847 ORTHO05D007143 8.8e-14 81.3 60 61.7
Medtr8g040720 Medicago truncatula HOM05D005847 ORTHO05D007143 5.7e-13 78.6 52 57.7
AUR62019890 Chenopodium quinoa HOM05D005847 ORTHO05D007143 1.1e-11 74.3 65 53.8
Nn1g00325 Nelumbo nucifera HOM05D005847 ORTHO05D007143 1.4e-11 73.9 110 40.0
Nitab4.5_0002728g0010 Nicotiana tabacum HOM05D005847 ORTHO05D007143 2.3e-06 56.6 29 75.9
Medtr8g040530 Medicago truncatula HOM05D005847 ORTHO05D007143 6.7e-06 55.1 44 52.3


User provided reference genes

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