Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2317 Ceratophyllum demersum HOM05D004959 ORTHO05D005961 2.2e-227 792.0 397 100.0
TAR622G1187 Trochodendron aralioides HOM05D004959 ORTHO05D005961 9.6e-50 201.8 431 32.7
Aqoxy3G03508 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 2.5e-45 187.2 426 33.3
Aqoxy7G01840 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 1.6e-41 174.5 423 32.9
Nn3g21093 Nelumbo nucifera HOM05D004959 ORTHO05D005961 5.3e-40 169.5 430 32.8
Aqoxy5G03195 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 1.2e-39 168.3 428 31.5
Hma1.2p1_0137F.1_g062550 Hydrangea macrophylla HOM05D004959 ORTHO05D005961 1.6e-36 157.9 427 32.3
Dinv06304 Davidia involucrata HOM05D004959 ORTHO05D005961 3.7e-33 146.7 430 30.2
Dinv04263 Davidia involucrata HOM05D004959 ORTHO05D005961 1.1e-32 145.2 430 30.0
Cfa000659 Carpinus fangiana HOM05D004959 ORTHO05D005961 1.5e-31 141.4 434 30.0
MBI07_g42017_MAGBIO Magnolia biondii HOM05D004959 ORTHO05D005961 1.5e-31 141.4 493 27.4
Rhsim02G0134800 Rhododendron simsii HOM05D004959 ORTHO05D005961 1.5e-31 141.4 441 29.9
GSVIVG01032944001 Vitis vinifera HOM05D004959 ORTHO05D005961 1.3e-30 138.3 439 28.5
Actinidia07601 Actinidia chinensis HOM05D004959 ORTHO05D005961 1.7e-30 137.9 449 28.5
PSO017G0156 Papaver somniferum HOM05D004959 ORTHO05D005961 1.1e-29 135.2 435 27.8
QL04p014466 Quercus lobata HOM05D004959 ORTHO05D005961 3.2e-29 133.7 434 28.8
QL04p014830 Quercus lobata HOM05D004959 ORTHO05D005961 3.2e-29 133.7 434 28.8
PSO478G1937 Papaver somniferum HOM05D004959 ORTHO05D005961 4.2e-29 133.3 434 27.9
TWI63G1138 Tripterygium wilfordii HOM05D004959 ORTHO05D005961 7.2e-29 132.5 423 28.1
Prupe.3G104300 Prunus persica HOM05D004959 ORTHO05D005961 2.7e-28 130.6 438 27.4
CANSAT25G2352 Cannabis sativa HOM05D004959 ORTHO05D005961 4.6e-28 129.8 416 28.1
RcHm_v2.0_Chr4g0396011 Rosa chinensis HOM05D004959 ORTHO05D005961 6.1e-28 129.4 417 26.6
Ciclev10014195m.g Citrus clementina HOM05D004959 ORTHO05D005961 7.9e-28 129.0 425 28.9
Sc10g0002790 Simmondsia chinensis HOM05D004959 ORTHO05D005961 7.9e-28 129.0 419 28.2
Atru.chr8.666 Acer truncatum HOM05D004959 ORTHO05D005961 1.4e-27 128.3 439 28.2
MD13G1224700 Malus domestica HOM05D004959 ORTHO05D005961 1.4e-27 128.3 451 26.6
Thecc.02G004800 Theobroma cacao HOM05D004959 ORTHO05D005961 3.0e-27 127.1 425 28.0
Rhsim01G0101500 Rhododendron simsii HOM05D004959 ORTHO05D005961 3.9e-27 126.7 441 28.3
FvH4_4g05080 Fragaria vesca HOM05D004959 ORTHO05D005961 5.1e-27 126.3 431 26.5
Sabra18G0102400 Salix brachista HOM05D004959 ORTHO05D005961 6.7e-27 125.9 424 26.2
MD16G1229900 Malus domestica HOM05D004959 ORTHO05D005961 2.0e-26 124.4 386 27.7
Potri.018G118800 Populus trichocarpa HOM05D004959 ORTHO05D005961 2.5e-26 124.0 423 25.8
Manes.16G050600 Manihot esculenta HOM05D004959 ORTHO05D005961 4.3e-26 123.2 444 27.7
EL10Ac2g04300 Beta vulgaris HOM05D004959 ORTHO05D005961 9.7e-26 122.1 425 27.3
PGR142G3977 Punica granatum HOM05D004959 ORTHO05D005961 1.3e-25 121.7 424 27.6
CiPaw.10G061900 Carya illinoinensis HOM05D004959 ORTHO05D005961 1.7e-25 121.3 421 25.7
AUR62012329 Chenopodium quinoa HOM05D004959 ORTHO05D005961 1.7e-25 121.3 426 28.2
Duzib248G0683 Durio zibethinus HOM05D004959 ORTHO05D005961 2.2e-25 120.9 428 27.1
Migut.E00612 Erythranthe guttata HOM05D004959 ORTHO05D005961 2.2e-25 120.9 441 27.4
Migut.E00705 Erythranthe guttata HOM05D004959 ORTHO05D005961 2.2e-25 120.9 441 27.7
vmacro15931 Vaccinium macrocarpon HOM05D004959 ORTHO05D005961 4.8e-25 119.8 479 26.1
FAN12G3376 Fragaria x ananassa HOM05D004959 ORTHO05D005961 8.2e-25 119.0 444 25.9
PGSC0003DMG400003329 Solanum tuberosum HOM05D004959 ORTHO05D005961 1.1e-24 118.6 445 27.2
MELO3C026444.2 Cucumis melo HOM05D004959 ORTHO05D005961 1.4e-24 118.2 435 25.5
AUR62022971 Chenopodium quinoa HOM05D004959 ORTHO05D005961 1.8e-24 117.9 416 27.4
Cpa.g.sc30.122 Carica papaya HOM05D004959 ORTHO05D005961 2.4e-24 117.5 434 28.1
FAN22G0965 Fragaria x ananassa HOM05D004959 ORTHO05D005961 3.1e-24 117.1 427 26.9
CsaV3_5G015760 Cucumis sativus L. HOM05D004959 ORTHO05D005961 5.3e-24 116.3 425 25.9
Gohir.A12G049000 Gossypium hirsutum HOM05D004959 ORTHO05D005961 9.1e-24 115.5 442 27.8
Sopen02g014720 Solanum pennellii HOM05D004959 ORTHO05D005961 9.1e-24 115.5 445 27.2
CSS0032692 Camellia sinensis var. sinensis HOM05D004959 ORTHO05D005961 1.5e-23 114.8 407 25.3
Eucgr.I01567 Eucalyptus grandis HOM05D004959 ORTHO05D005961 5.9e-23 112.8 440 27.7
Solyc02g064590.2 Solanum lycopersicum HOM05D004959 ORTHO05D005961 5.9e-23 112.8 438 27.4
Solyc02g064620.2 Solanum lycopersicum HOM05D004959 ORTHO05D005961 5.9e-23 112.8 438 27.4
Aqoxy5G03191 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 7.7e-23 112.5 230 33.5
ECA233G2209 Erigeron canadensis HOM05D004959 ORTHO05D005961 1.0e-22 112.1 414 25.8
Gohir.D12G047700 Gossypium hirsutum HOM05D004959 ORTHO05D005961 1.0e-22 112.1 424 27.8
PSO161G0046 Papaver somniferum HOM05D004959 ORTHO05D005961 1.0e-22 112.1 435 26.0
ATR0037G053 Amborella trichopoda HOM05D004959 ORTHO05D005961 2.2e-22 110.9 478 26.8
Gorai.008G050400 Gossypium raimondii HOM05D004959 ORTHO05D005961 3.8e-22 110.2 424 27.6
Nitab4.5_0000036g0080 Nicotiana tabacum HOM05D004959 ORTHO05D005961 3.8e-22 110.2 443 25.3
SGA_v2.0_scaffold36G14263 Striga asiatica HOM05D004959 ORTHO05D005961 5.0e-22 109.8 427 26.2
Nitab4.5_0010326g0010 Nicotiana tabacum HOM05D004959 ORTHO05D005961 8.5e-22 109.0 448 24.6
ClCG09G011850 Citrullus lanatus HOM05D004959 ORTHO05D005961 1.1e-21 108.6 427 27.4
HanXRQChr12g0366411 Helianthus annuus HOM05D004959 ORTHO05D005961 3.2e-21 107.1 423 25.8
CARHR226870 Cardamine hirsuta HOM05D004959 ORTHO05D005961 9.4e-21 105.5 422 25.6
Cc04_g10880 Coffea canephora HOM05D004959 ORTHO05D005961 1.2e-20 105.1 437 25.4
SGA_v2.0_scaffold99G29470 Striga asiatica HOM05D004959 ORTHO05D005961 1.2e-20 105.1 425 25.9
Peaxi162Scf00449g00320 Petunia axillaris HOM05D004959 ORTHO05D005961 6.1e-20 102.8 431 24.8
Sp7g18520 Schrenkiella parvula HOM05D004959 ORTHO05D005961 2.3e-19 100.9 438 25.8
HPP92_024644 Vanilla planifolia HOM05D004959 ORTHO05D005961 3.0e-19 100.5 456 23.7
COL.COLO4_18025 Corchorus olitorius HOM05D004959 ORTHO05D005961 3.9e-19 100.1 425 27.1
Glyma.19G032700 Glycine max HOM05D004959 ORTHO05D005961 6.7e-19 99.4 433 25.2
Lsat_1_v5_gn_8_33541 Lactuca sativa HOM05D004959 ORTHO05D005961 6.7e-19 99.4 414 26.3
BcaNung06192 Brassica carinata HOM05D004959 ORTHO05D005961 1.1e-18 98.6 413 26.2
Glyma.13G054500 Glycine max HOM05D004959 ORTHO05D005961 1.1e-18 98.6 425 24.7
Oeu021359.1 Olea europaea HOM05D004959 ORTHO05D005961 1.1e-18 98.6 430 24.9
Zm00001eb126950 Zea mays HOM05D004959 ORTHO05D005961 1.5e-18 98.2 504 21.8
Aqoxy5G03189 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 2.0e-18 97.8 257 29.2
VMungo0464G0163 Vigna mungo HOM05D004959 ORTHO05D005961 2.6e-18 97.4 422 24.6
BolC1t01373H Brassica oleracea HOM05D004959 ORTHO05D005961 3.3e-18 97.1 415 24.6
Hma1.2p1_0286F.1_g114200 Hydrangea macrophylla HOM05D004959 ORTHO05D005961 5.7e-18 96.3 170 38.2
Sed0018634 Sechium edule HOM05D004959 ORTHO05D005961 5.7e-18 96.3 429 25.6
Lj3A850G96 Lonicera japonica HOM05D004959 ORTHO05D005961 9.7e-18 95.5 246 34.6
A01p11860 Brassica napus HOM05D004959 ORTHO05D005961 1.3e-17 95.1 416 24.5
DCAR_026905 Daucus carota HOM05D004959 ORTHO05D005961 2.2e-17 94.4 429 26.6
HanXRQChr04g0121291 Helianthus annuus HOM05D004959 ORTHO05D005961 2.2e-17 94.4 392 25.0
Carub.0007s2107 Capsella rubella HOM05D004959 ORTHO05D005961 2.8e-17 94.0 430 24.0
C01p14060 Brassica napus HOM05D004959 ORTHO05D005961 3.7e-17 93.6 415 24.1
BraA01t01128Z Brassica rapa HOM05D004959 ORTHO05D005961 3.7e-17 93.6 416 24.3
Ah.09g226960 Amaranthus hybridus HOM05D004959 ORTHO05D005961 4.8e-17 93.2 388 25.3
AL7G33790 Arabidopsis lyrata HOM05D004959 ORTHO05D005961 4.8e-17 93.2 433 23.6
Haze_06165 Corylus avellana HOM05D004959 ORTHO05D005961 4.8e-17 93.2 439 26.9
Phvul.004G026300 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 4.8e-17 93.2 442 23.5
FAN17G1136 Fragaria x ananassa HOM05D004959 ORTHO05D005961 1.5e-13 81.6 395 24.8
Aa31LG6G2470 Aethionema arabicum HOM05D004959 ORTHO05D005961 1.9e-13 81.3 430 22.8
AT4G20060 Arabidopsis thaliana HOM05D004959 ORTHO05D005961 3.2e-13 80.5 445 22.5
CAN.G370.71 Capsicum annuum HOM05D004959 ORTHO05D005961 9.4e-13 79.0 191 30.4
SEGI_31831 Sequoiadendron giganteum HOM05D004959 ORTHO05D005961 6.7e-11 72.8 153 31.4
Os01g0103700 Oryza sativa ssp. japonica HOM05D004959 ORTHO05D005961 3.3e-10 70.5 125 30.4


User provided reference genes

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