Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 1.5e-192 676.0 337 100.0
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 3.4e-120 435.6 314 67.5
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 5.9e-117 424.9 286 71.0
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 2.9e-116 422.5 340 62.6
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 1.1e-115 420.6 321 65.4
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.2e-114 417.2 296 67.6
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 8.0e-114 414.5 311 66.6
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 1.0e-113 414.1 296 66.9
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.4e-113 413.7 296 67.2
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 1.4e-113 413.7 291 68.4
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.8e-113 413.3 311 65.9
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 2.3e-113 412.9 311 65.9
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 2.6e-112 409.5 321 64.2
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 2.6e-112 409.5 337 63.2
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 4.4e-112 408.7 323 65.3
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 5.7e-112 408.3 279 69.5
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 9.8e-112 407.5 305 65.6
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 3.7e-111 405.6 323 65.6
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 1.1e-110 404.1 314 64.3
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 1.1e-110 404.1 337 61.7
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 1.4e-110 403.7 335 61.5
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 2.4e-110 402.9 294 67.7
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 3.2e-110 402.5 338 61.2
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 3.2e-110 402.5 318 63.8
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 4.1e-110 402.1 291 67.0
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 5.4e-110 401.7 338 60.4
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 5.4e-110 401.7 298 65.4
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 5.4e-110 401.7 324 62.7
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 5.4e-110 401.7 313 64.2
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 9.2e-110 401.0 280 69.6
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 1.6e-109 400.2 291 66.0
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 2.7e-109 399.4 282 67.0
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 2.7e-109 399.4 333 62.5
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 3.5e-109 399.1 326 63.8
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 5.9e-109 398.3 284 66.2
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 2.9e-108 396.0 300 65.3
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 3.9e-108 395.6 282 69.9
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 3.9e-108 395.6 281 69.0
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 5.0e-108 395.2 284 65.5
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 5.0e-108 395.2 343 59.2
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 6.6e-108 394.8 303 64.7
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.1e-107 394.0 280 68.6
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 1.5e-107 393.7 295 65.8
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.5e-107 393.7 284 65.8
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 1.9e-107 393.3 259 70.7
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 3.3e-107 392.5 335 61.2
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 4.3e-107 392.1 336 60.4
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 4.3e-107 392.1 285 66.3
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 1.2e-106 390.6 289 65.1
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 1.6e-106 390.2 299 64.2
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 1.6e-106 390.2 315 62.2
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 2.8e-106 389.4 335 59.7
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 1.8e-105 386.7 295 64.4
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 1.8e-105 386.7 322 60.6
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 2.3e-105 386.3 297 66.7
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 4.0e-105 385.6 282 66.0
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 4.0e-105 385.6 282 66.0
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 4.0e-105 385.6 303 63.7
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 5.2e-105 385.2 334 62.0
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 8.9e-105 384.4 308 62.0
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 8.9e-105 384.4 303 61.7
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 1.2e-104 384.0 290 64.8
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 1.5e-104 383.6 270 69.3
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 1.5e-104 383.6 254 70.1
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 2.6e-104 382.9 294 64.6
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 2.6e-104 382.9 258 70.2
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 5.8e-104 381.7 333 58.9
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 9.8e-104 380.9 258 69.8
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 1.3e-103 380.6 368 55.2
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 1.7e-103 380.2 310 60.3
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 6.4e-103 378.3 330 57.3
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 8.3e-103 377.9 282 66.0
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 1.1e-102 377.5 310 59.7
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 1.1e-102 377.5 308 60.1
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.1e-102 377.5 295 63.4
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 1.4e-102 377.1 308 59.1
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 1.4e-102 377.1 279 63.8
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 2.4e-102 376.3 339 59.3
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 3.2e-102 375.9 308 59.4
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 4.1e-102 375.6 279 64.9
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 2.0e-101 373.2 279 64.9
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 4.6e-101 372.1 295 62.4
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 8.6e-100 367.9 274 66.4
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 7.3e-99 364.8 306 59.8
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 7.3e-99 364.8 384 52.9
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 1.2e-98 364.0 280 63.9
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 1.6e-98 363.6 275 65.1
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 2.0e-96 356.7 449 46.3
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 6.4e-95 351.7 294 60.9
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 7.8e-93 344.7 331 57.1
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 5.6e-91 338.6 230 70.9
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 5.8e-88 328.6 264 58.3
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 8.4e-87 324.7 298 53.0
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 2.1e-82 310.1 332 54.8
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 3.6e-82 309.3 279 56.6
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 6.8e-81 305.1 235 63.8
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 1.7e-79 300.4 273 56.8
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 4.6e-77 292.4 288 55.9
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.5e-75 287.3 278 50.4
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 7.3e-75 285.0 286 53.1
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 2.6e-72 276.6 279 52.3
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.3e-63 247.7 156 72.4
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 1.6e-58 230.7 189 59.8
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 7.1e-54 215.3 146 67.8
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 2.8e-50 203.4 133 71.4
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 1.8e-49 200.7 134 71.6
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 9.0e-49 198.4 133 70.7
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 1.5e-48 197.6 267 39.3
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 1.4e-46 191.0 135 65.2
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 4.8e-42 176.0 214 44.9
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 2.5e-35 153.7 98 71.4
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 2.9e-31 140.2 313 33.9
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 3.6e-29 133.3 269 32.7
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 2.8e-26 123.6 256 30.9
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 3.2e-14 83.6 80 43.8
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 5.7e-11 72.8 98 45.9
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 3.5e-08 63.5 55 50.9


User provided reference genes

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