Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2289 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 1.4e-193 679.5 359 100.0
CDE06G0298 Ceratophyllum demersum HOM05D000165 ORTHO05D005388 6.1e-128 461.5 294 87.1
TAR626G1909 Trochodendron aralioides HOM05D004683 ORTHO05D005388 1.2e-96 357.5 324 62.0
Nn1g07478 Nelumbo nucifera HOM05D004683 ORTHO05D005388 8.0e-96 354.8 324 61.1
MBI19_g44082_MAGBIO Magnolia biondii HOM05D004683 ORTHO05D005388 2.3e-90 336.7 325 60.9
Dinv04407 Davidia involucrata HOM05D004683 ORTHO05D005388 3.9e-90 335.9 347 58.5
CSS0016540 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 4.1e-84 315.8 327 58.4
Aqoxy4G02236 Aquilegia oxysepala HOM05D004683 ORTHO05D005388 9.5e-81 304.7 322 56.2
GSVIVG01007216001 Vitis vinifera HOM05D004683 ORTHO05D005388 8.9e-79 298.1 259 65.6
ClCG01G010700 Citrullus lanatus HOM05D004683 ORTHO05D005388 5.4e-76 288.9 324 56.8
PSO541G4951 Papaver somniferum HOM05D004683 ORTHO05D005388 7.1e-76 288.5 339 52.8
CSS0018655 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 7.8e-75 285.0 321 54.8
CsaV3_1G015800 Cucumis sativus L. HOM05D004683 ORTHO05D005388 1.3e-74 284.3 300 58.7
CsaV3_UNG061480 Cucumis sativus L. HOM05D004683 ORTHO05D005388 1.3e-74 284.3 300 58.7
RcHm_v2.0_Chr5g0000761 Rosa chinensis HOM05D004683 ORTHO05D005388 1.3e-74 284.3 312 57.1
Actinidia11898 Actinidia chinensis HOM05D004683 ORTHO05D005388 3.0e-74 283.1 327 54.1
Sed0018998 Sechium edule HOM05D004683 ORTHO05D005388 6.6e-74 282.0 322 55.3
PSO675G6369 Papaver somniferum HOM05D004683 ORTHO05D005388 8.6e-74 281.6 339 52.2
Actinidia39280 Actinidia chinensis HOM05D004683 ORTHO05D005388 1.1e-73 281.2 327 54.4
FAN25G2373 Fragaria x ananassa HOM05D004683 ORTHO05D005388 1.5e-73 280.8 324 54.0
Cfa000066 Carpinus fangiana HOM05D004683 ORTHO05D005388 5.6e-73 278.9 323 53.9
MELO3C025532.2 Cucumis melo HOM05D004683 ORTHO05D005388 1.2e-72 277.7 334 54.8
MD10G1336700 Malus domestica HOM05D004683 ORTHO05D005388 1.6e-72 277.3 300 58.0
Prupe.4G006700 Prunus persica HOM05D004683 ORTHO05D005388 2.4e-71 273.5 331 53.2
Manes.09G081701 Manihot esculenta HOM05D004683 ORTHO05D005388 4.0e-71 272.7 330 55.5
FvH4_3g00551 Fragaria vesca HOM05D004683 ORTHO05D005388 2.0e-70 270.4 311 53.4
Solyc11g012610.2 Solanum lycopersicum HOM05D004683 ORTHO05D005388 7.6e-70 268.5 314 52.2
Lj2A259T33 Lonicera japonica HOM05D004683 ORTHO05D005388 9.9e-70 268.1 322 51.6
Potri.006G017200 Populus trichocarpa HOM05D004683 ORTHO05D005388 9.9e-70 268.1 331 53.5
ATR0624G003 Amborella trichopoda HOM05D004683 ORTHO05D005388 1.3e-69 267.7 330 50.9
Sabra06G0012200 Salix brachista HOM05D004683 ORTHO05D005388 1.3e-69 267.7 330 53.0
Duzib160G0680 Durio zibethinus HOM05D004683 ORTHO05D005388 1.7e-69 267.3 331 51.4
PGSC0003DMG400013358 Solanum tuberosum HOM05D004683 ORTHO05D005388 1.7e-69 267.3 315 51.7
Potri.016G008400 Populus trichocarpa HOM05D004683 ORTHO05D005388 2.2e-69 266.9 331 53.8
CSS0042800 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.6e-67 260.8 303 55.1
CAN.G696.10 Capsicum annuum HOM05D004683 ORTHO05D005388 2.1e-67 260.4 322 50.9
Gohir.D10G008100 Gossypium hirsutum HOM05D004683 ORTHO05D005388 7.8e-67 258.5 325 51.1
MD00G1058000 Malus domestica HOM05D004683 ORTHO05D005388 7.8e-67 258.5 236 64.0
Gohir.A10G008300 Gossypium hirsutum HOM05D004683 ORTHO05D005388 3.0e-66 256.5 325 50.5
Atru.chr1.2335 Acer truncatum HOM05D004683 ORTHO05D005388 3.9e-66 256.1 231 63.2
Phvul.006G141000 Phaseolus vulgaris HOM05D004683 ORTHO05D005388 3.9e-66 256.1 328 52.4
Sc05g0009730 Simmondsia chinensis HOM05D004683 ORTHO05D005388 5.1e-66 255.8 329 48.9
Nitab4.5_0001668g0040 Nicotiana tabacum HOM05D004683 ORTHO05D005388 6.6e-66 255.4 319 50.8
Peaxi162Scf00352g01036 Petunia axillaris HOM05D004683 ORTHO05D005388 8.7e-66 255.0 307 52.1
Oeu052851.1 Olea europaea HOM05D004683 ORTHO05D005388 1.1e-65 254.6 257 57.2
Gorai.011G008800 Gossypium raimondii HOM05D004683 ORTHO05D005388 1.9e-65 253.8 324 50.3
SalBow8G0627 Salvia bowleyana HOM05D004683 ORTHO05D005388 4.3e-65 252.7 323 48.6
Duzib235G0361 Durio zibethinus HOM05D004683 ORTHO05D005388 1.6e-64 250.8 324 49.7
Lj6g0001835 Lotus japonicus HOM05D004683 ORTHO05D005388 2.1e-64 250.4 329 51.4
PGSC0003DMG400023555 Solanum tuberosum HOM05D004683 ORTHO05D005388 2.1e-64 250.4 331 49.2
Lsat_1_v5_gn_7_14120 Lactuca sativa HOM05D004683 ORTHO05D005388 6.2e-64 248.8 331 52.0
PGR004G0928 Punica granatum HOM05D004683 ORTHO05D005388 6.2e-64 248.8 334 49.1
TAR341G0001 Trochodendron aralioides HOM05D004683 ORTHO05D005388 8.1e-64 248.4 258 57.8
TAR485G0001 Trochodendron aralioides HOM05D004683 ORTHO05D005388 8.1e-64 248.4 258 57.8
Cc09_g00590 Coffea canephora HOM05D004683 ORTHO05D005388 3.1e-63 246.5 272 54.4
CANSAT56G4109 Cannabis sativa HOM05D004683 ORTHO05D005388 5.3e-63 245.7 331 48.6
Gorai.010G188900 Gossypium raimondii HOM05D004683 ORTHO05D005388 6.9e-63 245.4 327 48.6
Hma1.2p1_0657F.1_g196900 Hydrangea macrophylla HOM05D004683 ORTHO05D005388 1.5e-62 244.2 323 49.5
Peaxi162Scf01544g00025 Petunia axillaris HOM05D004683 ORTHO05D005388 1.5e-62 244.2 251 59.0
Eucgr.D01443 Eucalyptus grandis HOM05D004683 ORTHO05D005388 2.0e-62 243.8 326 50.0
COL.COLO4_15259 Corchorus olitorius HOM05D004683 ORTHO05D005388 2.6e-62 243.4 326 49.4
Gohir.A06G155500 Gossypium hirsutum HOM05D004683 ORTHO05D005388 2.6e-62 243.4 327 48.3
CiPaw.09G105900 Carya illinoinensis HOM05D004683 ORTHO05D005388 5.8e-62 242.3 331 48.9
arahy.Tifrunner.gnm1.ann1.5M71YA Arachis hypogaea HOM05D004683 ORTHO05D005388 9.9e-62 241.5 311 50.5
Gohir.D06G161900 Gossypium hirsutum HOM05D004683 ORTHO05D005388 9.9e-62 241.5 327 48.0
Sabra16G0012800 Salix brachista HOM05D004683 ORTHO05D005388 9.9e-62 241.5 349 50.1
Oeu052866.1 Olea europaea HOM05D004683 ORTHO05D005388 1.3e-61 241.1 283 53.4
arahy.Tifrunner.gnm1.ann1.L4TARN Arachis hypogaea HOM05D004683 ORTHO05D005388 2.2e-61 240.4 311 50.5
AUR62021828 Chenopodium quinoa HOM05D004683 ORTHO05D005388 3.8e-61 239.6 316 49.7
HanXRQChr15g0470281 Helianthus annuus HOM05D004683 ORTHO05D005388 3.8e-61 239.6 285 55.8
SGA_v2.0_scaffold7G03714 Striga asiatica HOM05D004683 ORTHO05D005388 3.8e-61 239.6 307 49.8
Lalb_Chr15g0088101 Lupinus albus HOM05D004683 ORTHO05D005388 1.4e-60 237.7 271 55.7
Lsat_1_v5_gn_0_24381 Lactuca sativa HOM05D004683 ORTHO05D005388 5.4e-60 235.7 313 50.8
Hund21139 Selenicereus undatus HOM05D004683 ORTHO05D005388 1.6e-59 234.2 330 47.9
DCAR_030854 Daucus carota HOM05D004683 ORTHO05D005388 2.7e-59 233.4 322 47.5
THA.LOC104806735 Tarenaya hassleriana HOM05D004683 ORTHO05D005388 1.7e-58 230.7 326 48.2
Medtr2g026550 Medicago truncatula HOM05D004683 ORTHO05D005388 3.0e-58 229.9 320 50.3
Haze_06980 Corylus avellana HOM05D004683 ORTHO05D005388 6.6e-58 228.8 331 47.4
AUR62012829 Chenopodium quinoa HOM05D004683 ORTHO05D005388 2.5e-57 226.9 316 48.1
Oeu030103.1 Olea europaea HOM05D004683 ORTHO05D005388 3.3e-57 226.5 302 48.0
TWI38G0781 Tripterygium wilfordii HOM05D004683 ORTHO05D005388 5.6e-57 225.7 345 46.1
EL10Ac8g20240 Beta vulgaris HOM05D004683 ORTHO05D005388 7.3e-57 225.3 336 46.1
Thecc.06G237400 Theobroma cacao HOM05D004683 ORTHO05D005388 5.3e-55 219.2 322 46.3
HPP92_014031 Vanilla planifolia HOM05D004683 ORTHO05D005388 1.2e-54 218.0 336 44.6
Nitab4.5_0004646g0030 Nicotiana tabacum HOM05D004683 ORTHO05D005388 1.5e-54 217.6 322 47.2
TWI63G0041 Tripterygium wilfordii HOM05D004683 ORTHO05D005388 2.2e-53 213.8 348 45.1
Sopen04g006980 Solanum pennellii HOM05D004683 ORTHO05D005388 2.9e-53 213.4 331 44.7
Ah.14g087460 Amaranthus hybridus HOM05D004683 ORTHO05D005388 3.8e-53 213.0 330 44.2
Migut.M01430 Erythranthe guttata HOM05D004683 ORTHO05D005388 4.9e-53 212.6 311 45.7
Solyc04g014850.3 Solanum lycopersicum HOM05D004683 ORTHO05D005388 1.9e-52 210.7 331 44.4
TPR.G10575 Trifolium pratense HOM05D004683 ORTHO05D005388 1.9e-52 210.7 328 47.0
Rhsim02G0091200 Rhododendron simsii HOM05D004683 ORTHO05D005388 2.4e-52 210.3 333 45.6
QL05p068304 Quercus lobata HOM05D004683 ORTHO05D005388 2.1e-51 207.2 335 44.5
HPP92_028363 Vanilla planifolia HOM05D004683 ORTHO05D005388 3.5e-51 206.5 359 41.5
Aa31LG6G60 Aethionema arabicum HOM05D004683 ORTHO05D005388 8.7e-50 201.8 323 45.8
Psat1g173720 Pisum sativum HOM05D004683 ORTHO05D005388 1.1e-49 201.4 326 46.6
Glyma.15G117000 Glycine max HOM05D004683 ORTHO05D005388 1.5e-49 201.1 312 44.6
AT4G17240 Arabidopsis thaliana HOM05D004683 ORTHO05D005388 2.5e-49 200.3 318 46.2
Carub.0007s2417 Capsella rubella HOM05D004683 ORTHO05D005388 2.5e-49 200.3 318 46.9
Ca_00746_v3 Cicer arietinum L. HOM05D004683 ORTHO05D005388 1.6e-48 197.6 249 51.8
BolC1t02477H Brassica oleracea HOM05D004683 ORTHO05D005388 2.1e-48 197.2 291 47.8
QL05p068796 Quercus lobata HOM05D004683 ORTHO05D005388 2.8e-48 196.8 335 42.7
AL7G37470 Arabidopsis lyrata HOM05D004683 ORTHO05D005388 3.7e-48 196.4 315 45.7
vmacro15736 Vaccinium macrocarpon HOM05D004683 ORTHO05D005388 3.7e-48 196.4 295 45.8
Sabra16G0012500 Salix brachista HOM05D004683 ORTHO05D005388 6.2e-48 195.7 265 52.8
A01p20140 Brassica napus HOM05D004683 ORTHO05D005388 8.1e-48 195.3 284 48.2
BraA01t01938Z Brassica rapa HOM05D004683 ORTHO05D005388 8.1e-48 195.3 284 48.2
BcaC09g50454 Brassica carinata HOM05D004683 ORTHO05D005388 1.1e-47 194.9 291 47.4
C01p25270 Brassica napus HOM05D004683 ORTHO05D005388 1.1e-47 194.9 291 47.4
CARHR223850 Cardamine hirsuta HOM05D004683 ORTHO05D005388 4.0e-47 193.0 315 45.1
MSTRG.7144 Avicennia marina HOM05D004683 ORTHO05D005388 9.0e-47 191.8 262 48.1
Sp7g16950 Schrenkiella parvula HOM05D004683 ORTHO05D005388 9.0e-47 191.8 317 46.4
Ah.09g234040 Amaranthus hybridus HOM05D004683 ORTHO05D005388 4.5e-46 189.5 339 42.8
unitig_37.g12183 Utricularia gibba HOM05D004683 ORTHO05D005388 1.7e-45 187.6 174 58.0
CAN.G1263.24 Capsicum annuum HOM05D004683 ORTHO05D005388 2.9e-45 186.8 282 42.2
Glyma.09G012400 Glycine max HOM05D004683 ORTHO05D005388 2.9e-45 186.8 324 43.8
SEGI_35929 Sequoiadendron giganteum HOM05D004683 ORTHO05D005388 2.9e-45 186.8 343 40.5
Cpa.g.sc27.252 Carica papaya HOM05D004683 ORTHO05D005388 6.5e-45 185.7 293 46.8
Thhalv10025641m.g Eutrema salsugineum HOM05D004683 ORTHO05D005388 6.5e-45 185.7 311 44.7
VMungo0540G0168 Vigna mungo HOM05D004683 ORTHO05D005388 2.7e-43 180.3 320 44.7
CDE04G1899 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 7.9e-43 178.7 314 41.7
CDE07G1645 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 1.9e-36 157.5 291 41.2
ECA246G4668 Erigeron canadensis HOM05D004683 ORTHO05D005388 1.2e-35 154.8 267 44.2
Zm00001eb214850 Zea mays HOM05D004683 ORTHO05D005388 4.6e-35 152.9 286 37.1
Ciclev10017876m.g Citrus clementina HOM05D004683 ORTHO05D005388 7.9e-35 152.1 335 40.6
Zm00001eb057420 Zea mays HOM05D004683 ORTHO05D005388 1.5e-33 147.9 328 35.7
Nitab4.5_0001109g0120 Nicotiana tabacum HOM05D004683 ORTHO05D005388 4.3e-33 146.4 322 38.5
PSO339G0967 Papaver somniferum HOM05D004683 ORTHO05D005388 4.8e-32 142.9 105 68.6
BcaNung00108 Brassica carinata HOM05D004683 ORTHO05D005388 6.5e-29 132.5 237 43.0
Sopen11g007340 Solanum pennellii HOM05D004683 ORTHO05D005388 8.5e-29 132.1 112 60.7
CSS0001859 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 4.6e-27 126.3 188 49.5
CSS0027604 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 4.6e-27 126.3 188 49.5
CSS0022133 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.0e-26 125.2 200 47.5
MSTRG.16041 Avicennia marina HOM05D004683 ORTHO05D005388 2.4e-23 114.0 110 59.1
MSTRG.14824 Avicennia marina HOM05D004683 ORTHO05D005388 6.9e-23 112.5 110 59.1
Os03g0750900 Oryza sativa ssp. japonica HOM05D004683 ORTHO05D005388 1.2e-22 111.7 211 37.4
Sopen00g010710 Solanum pennellii HOM05D004683 ORTHO05D005388 7.9e-19 99.0 178 41.6
CSS0011389 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.3e-16 91.7 67 65.7
CSS0004114 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.8e-15 87.8 193 39.9
CSS0009085 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 2.4e-15 87.4 193 41.5
CSS0022243 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 2.4e-15 87.4 193 39.9
CSS0017523 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 5.3e-15 86.3 193 39.4
CSS0042721 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 7.0e-15 85.9 193 39.4
CSS0049827 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.2e-14 85.1 193 39.4
A09p40660 Brassica napus HOM05D004683 ORTHO05D005388 5.0e-13 79.7 72 61.1
SMO351G0434 Selaginella moellendorffii HOM05D025386 ORTHO05D005388 4.7e-11 73.2 261 28.4
Os05g0547100 Oryza sativa ssp. japonica HOM05D004683 ORTHO05D005388 3.9e-10 70.1 160 34.4
COL.COLO4_30227 Corchorus olitorius HOM05D001156 ORTHO05D001006 1.7e-08 64.7 100 47.0
Sabra19G0093600 Salix brachista HOM05D000057 ORTHO05D005388 1.1e-07 62.0 68 54.4
Zm00001eb365900 Zea mays HOM05D004683 ORTHO05D005388 1.1e-07 62.0 127 33.1
CSS0019011 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.4e-07 61.6 166 38.0
AagrBONN_evm.TU.Sc2ySwM_117.2428 Anthoceros agrestis HOM05D025386 ORTHO05D026614 5.3e-07 59.7 152 32.9
FAN11G0338 Fragaria x ananassa HOM05D004683 ORTHO05D035386 9.1e-07 58.9 76 51.3


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