Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2248 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 2.5e-68 261.9 129 100.0
TAR636G3199 Trochodendron aralioides HOM05D005617 ORTHO05D006847 2.2e-51 205.7 112 89.3
Dinv07760 Davidia involucrata HOM05D005617 ORTHO05D006847 2.4e-50 202.2 112 86.6
Hma1.2p1_0075F.1_g039170 Hydrangea macrophylla HOM05D005617 ORTHO05D006847 5.9e-49 197.6 112 84.8
CSS0012605 Camellia sinensis var. sinensis HOM05D005617 ORTHO05D006847 7.7e-49 197.2 112 83.0
GSVIVG01023530001 Vitis vinifera HOM05D005617 ORTHO05D006847 7.7e-49 197.2 112 84.8
MBI10_g30078_MAGBIO Magnolia biondii HOM05D005617 ORTHO05D006847 1.0e-48 196.8 117 82.1
Haze_04439 Corylus avellana HOM05D005617 ORTHO05D006847 6.5e-48 194.1 113 82.3
CiPaw.08G118100 Carya illinoinensis HOM05D005617 ORTHO05D006847 1.1e-47 193.4 112 83.0
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 1.5e-47 193.0 112 82.1
Sc06g0003230 Simmondsia chinensis HOM05D005617 ORTHO05D006847 1.5e-47 193.0 112 82.1
Lsat_1_v5_gn_2_108021 Lactuca sativa HOM05D005617 ORTHO05D006847 7.2e-47 190.7 112 79.5
PGR142G1895 Punica granatum HOM05D005617 ORTHO05D006847 7.2e-47 190.7 112 82.1
Thecc.05G271700 Theobroma cacao HOM05D005617 ORTHO05D006847 9.4e-47 190.3 112 80.4
MD17G1278900 Malus domestica HOM05D005617 ORTHO05D006847 1.2e-46 189.9 112 81.2
Aqoxy2G03651 Aquilegia oxysepala HOM05D005617 ORTHO05D006847 1.6e-46 189.5 112 82.1
ECA238G4125 Erigeron canadensis HOM05D005617 ORTHO05D006847 1.6e-46 189.5 112 79.5
TWI56G1032 Tripterygium wilfordii HOM05D005617 ORTHO05D006847 1.6e-46 189.5 112 79.5
Nitab4.5_0003780g0030 Nicotiana tabacum HOM05D005617 ORTHO05D006847 2.1e-46 189.1 112 81.2
Ah.06g191860 Amaranthus hybridus HOM05D005617 ORTHO05D006847 2.7e-46 188.7 112 79.5
COL.COLO4_15469 Corchorus olitorius HOM05D005617 ORTHO05D006847 2.7e-46 188.7 114 81.6
MD09G1286500 Malus domestica HOM05D005617 ORTHO05D006847 2.7e-46 188.7 112 80.4
QL03p030835 Quercus lobata HOM05D005617 ORTHO05D006847 2.7e-46 188.7 112 81.2
Cc02_g08910 Coffea canephora HOM05D005617 ORTHO05D006847 3.6e-46 188.3 112 83.0
Duzib177G1169 Durio zibethinus HOM05D005617 ORTHO05D006847 3.6e-46 188.3 112 82.1
Gohir.A11G299400 Gossypium hirsutum HOM05D005617 ORTHO05D006847 3.6e-46 188.3 112 80.4
Nitab4.5_0003768g0040 Nicotiana tabacum HOM05D005617 ORTHO05D006847 3.6e-46 188.3 112 81.2
Eucgr.B02145 Eucalyptus grandis HOM05D005617 ORTHO05D006847 6.1e-46 187.6 113 82.3
Eucgr.L02949 Eucalyptus grandis HOM05D005617 ORTHO05D006847 6.1e-46 187.6 113 82.3
PSO017G5929 Papaver somniferum HOM05D005617 ORTHO05D006847 6.1e-46 187.6 112 80.4
Gohir.D11G314200 Gossypium hirsutum HOM05D005617 ORTHO05D006847 1.0e-45 186.8 112 80.4
Gorai.007G345400 Gossypium raimondii HOM05D005617 ORTHO05D006847 1.0e-45 186.8 112 80.4
Prupe.6G349300 Prunus persica HOM05D005617 ORTHO05D006847 1.8e-45 186.0 112 78.6
ATR0736G212 Amborella trichopoda HOM05D005617 ORTHO05D006847 3.0e-45 185.3 113 78.8
Sed0027621 Sechium edule HOM05D005617 ORTHO05D006847 3.0e-45 185.3 112 80.4
AUR62004851 Chenopodium quinoa HOM05D005617 ORTHO05D006847 4.0e-45 184.9 112 79.5
Potri.019G018300 Populus trichocarpa HOM05D005617 ORTHO05D006847 4.0e-45 184.9 112 76.8
CAN.G1609.4 Capsicum annuum HOM05D005617 ORTHO05D006847 5.2e-45 184.5 112 78.6
PSO063G2686 Papaver somniferum HOM05D005617 ORTHO05D006847 5.2e-45 184.5 112 79.5
Potri.013G046200 Populus trichocarpa HOM05D005617 ORTHO05D006847 6.7e-45 184.1 112 76.8
Sabra13G0042400 Salix brachista HOM05D005617 ORTHO05D006847 8.8e-45 183.7 123 72.4
Actinidia34747 Actinidia chinensis HOM05D005617 ORTHO05D006847 1.2e-44 183.3 112 76.8
AUR62040935 Chenopodium quinoa HOM05D005617 ORTHO05D006847 1.2e-44 183.3 112 78.6
ClCG03G000920 Citrullus lanatus HOM05D005617 ORTHO05D006847 1.2e-44 183.3 112 78.6
RcHm_v2.0_Chr3g0449811 Rosa chinensis HOM05D005617 ORTHO05D006847 1.2e-44 183.3 112 78.6
Sopen04g005070 Solanum pennellii HOM05D005617 ORTHO05D006847 1.2e-44 183.3 112 77.7
PGSC0003DMG400011501 Solanum tuberosum HOM05D005617 ORTHO05D006847 1.2e-44 183.3 112 77.7
Lj2A41G63 Lonicera japonica HOM05D005617 ORTHO05D006847 1.5e-44 183.0 113 77.9
Peaxi162Scf00135g00418 Petunia axillaris HOM05D005617 ORTHO05D006847 1.5e-44 183.0 112 78.6
MSTRG.27377 Avicennia marina HOM05D005617 ORTHO05D006847 2.0e-44 182.6 112 77.7
HPP92_002964 Vanilla planifolia HOM05D005617 ORTHO05D006847 2.0e-44 182.6 112 77.7
HanXRQChr14g0455191 Helianthus annuus HOM05D005617 ORTHO05D006847 2.6e-44 182.2 112 79.5
Solyc04g009940.4 Solanum lycopersicum HOM05D005617 ORTHO05D006847 2.6e-44 182.2 112 76.8
DCAR_023096 Daucus carota HOM05D005617 ORTHO05D006847 3.3e-44 181.8 112 78.6
Medtr7g115670 Medicago truncatula HOM05D005617 ORTHO05D006847 3.3e-44 181.8 112 76.8
Oeu012233.2 Olea europaea HOM05D005617 ORTHO05D006847 3.3e-44 181.8 112 78.6
Manes.08G138800 Manihot esculenta HOM05D005617 ORTHO05D006847 9.7e-44 180.3 112 75.9
Psat3g006600 Pisum sativum HOM05D005617 ORTHO05D006847 9.7e-44 180.3 112 75.0
THA.LOC104805778 Tarenaya hassleriana HOM05D005617 ORTHO05D006847 9.7e-44 180.3 120 71.7
EL10Ac4g09040 Beta vulgaris HOM05D005617 ORTHO05D006847 1.3e-43 179.9 112 76.8
CANSAT54G2044 Cannabis sativa HOM05D005617 ORTHO05D006847 2.2e-43 179.1 112 76.8
CsaV3_1G036020 Cucumis sativus L. HOM05D005617 ORTHO05D006847 2.8e-43 178.7 112 76.8
SalBow3G1639 Salvia bowleyana HOM05D005617 ORTHO05D006847 2.8e-43 178.7 112 76.8
Glyma.19G248200 Glycine max HOM05D005617 ORTHO05D006847 3.7e-43 178.3 112 74.1
FvH4_6g01960 Fragaria vesca HOM05D005617 ORTHO05D006847 4.8e-43 177.9 128 68.0
TPR.G6961 Trifolium pratense HOM05D005617 ORTHO05D006847 4.8e-43 177.9 128 66.4
Atru.chr2.967 Acer truncatum HOM05D005617 ORTHO05D006847 6.3e-43 177.6 112 75.9
Lj1g0025948 Lotus japonicus HOM05D005617 ORTHO05D006847 1.4e-42 176.4 112 73.2
FAN02G1215 Fragaria x ananassa HOM05D001473 ORTHO05D003934 2.4e-42 175.6 112 75.0
FAN14G0582 Fragaria x ananassa HOM05D005617 ORTHO05D006847 2.4e-42 175.6 112 75.0
FAN05G0714 Fragaria x ananassa HOM05D001473 ORTHO05D003934 3.1e-42 175.3 112 75.0
FAN14G1026 Fragaria x ananassa HOM05D001473 ORTHO05D003934 3.1e-42 175.3 112 75.0
VMungo0540G0455 Vigna mungo HOM05D005617 ORTHO05D006847 3.1e-42 175.3 112 73.2
Phvul.006G105300 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 4.1e-42 174.9 112 72.3
Migut.F00803 Erythranthe guttata HOM05D005617 ORTHO05D006847 5.3e-42 174.5 113 76.1
unitig_32.g10679 Utricularia gibba HOM05D005617 ORTHO05D006847 1.2e-41 173.3 125 70.4
arahy.Tifrunner.gnm1.ann1.X65E39 Arachis hypogaea HOM05D005617 ORTHO05D006847 2.0e-41 172.6 112 70.5
FAN09G1753 Fragaria x ananassa HOM05D001473 ORTHO05D003934 2.0e-41 172.6 113 73.5
arahy.Tifrunner.gnm1.ann1.9NRB0Q Arachis hypogaea HOM05D005617 ORTHO05D006847 2.7e-41 172.2 112 70.5
FAN05G5604 Fragaria x ananassa HOM05D001473 ORTHO05D003934 3.5e-41 171.8 112 74.1
Hund22155 Selenicereus undatus HOM05D005617 ORTHO05D006847 3.5e-41 171.8 112 73.2
AL1G19070 Arabidopsis lyrata HOM05D005617 ORTHO05D006847 4.5e-41 171.4 112 72.3
Thhalv10008167m.g Eutrema salsugineum HOM05D005617 ORTHO05D006847 4.5e-41 171.4 112 72.3
AT1G08640 Arabidopsis thaliana HOM05D005617 ORTHO05D006847 5.9e-41 171.0 112 72.3
Glyma.03G250700 Glycine max HOM05D005617 ORTHO05D006847 5.9e-41 171.0 112 71.4
Lalb_Chr04g0262061 Lupinus albus HOM05D005617 ORTHO05D006847 7.7e-41 170.6 112 69.6
Rhsim09G0137600 Rhododendron simsii HOM05D005617 ORTHO05D006847 7.7e-41 170.6 111 73.0
Ciclev10021517m.g Citrus clementina HOM05D005617 ORTHO05D006847 1.0e-40 170.2 112 72.3
Nn1g08261 Nelumbo nucifera HOM05D005617 ORTHO05D006847 1.3e-40 169.9 93 86.0
A06p05600 Brassica napus HOM05D005617 ORTHO05D006847 2.2e-40 169.1 112 70.5
Sp1g07300 Schrenkiella parvula HOM05D005617 ORTHO05D006847 2.9e-40 168.7 112 70.5
Carub.0001s0800 Capsella rubella HOM05D005617 ORTHO05D006847 5.0e-40 167.9 112 70.5
BcaB07g34105 Brassica carinata HOM05D005617 ORTHO05D006847 6.5e-40 167.5 112 70.5
BraA06t23768Z Brassica rapa HOM05D005617 ORTHO05D006847 6.5e-40 167.5 112 69.6
CARHR008550 Cardamine hirsuta HOM05D005617 ORTHO05D006847 6.5e-40 167.5 112 69.6
BcaC05g24795 Brassica carinata HOM05D005617 ORTHO05D006847 1.1e-39 166.8 112 68.8
BolC5t29432H Brassica oleracea HOM05D005617 ORTHO05D006847 1.1e-39 166.8 112 68.8
C05p06720 Brassica napus HOM05D005617 ORTHO05D006847 1.5e-39 166.4 112 68.8
Aa31sc110G20 Aethionema arabicum HOM05D005617 ORTHO05D006847 1.6e-38 162.9 112 67.0
BcaB03g13320 Brassica carinata HOM05D005617 ORTHO05D006847 1.8e-37 159.5 112 70.5
SEGI_39921 Sequoiadendron giganteum HOM05D005617 ORTHO05D006847 2.6e-36 155.6 112 61.6
Zm00001eb261540 Zea mays HOM05D005617 ORTHO05D006847 4.8e-35 151.4 112 59.8
CDE04G1987 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 4.1e-34 148.3 112 75.0
Os08g0127600 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 2.7e-33 145.6 112 59.8
Zm00001eb173360 Zea mays HOM05D005617 ORTHO05D006847 1.1e-31 140.2 112 58.9
Sabra19G0030400 Salix brachista HOM05D001473 ORTHO05D003934 6.8e-29 131.0 85 74.1
Ca_09461_v3 Cicer arietinum L. HOM05D005617 ORTHO05D006847 3.4e-28 128.6 78 73.1
Mapoly0036s0041 Marchantia polymorpha HOM05D005617 ORTHO05D006847 4.4e-28 128.3 113 55.8
BcaC07g38407 Brassica carinata HOM05D005617 ORTHO05D006847 2.8e-27 125.6 88 64.8
Os10g0478100 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 3.7e-27 125.2 112 54.5
vmacro10358 Vaccinium macrocarpon HOM05D005617 ORTHO05D006847 3.7e-27 125.2 157 42.0
C08p11620 Brassica napus HOM05D005617 ORTHO05D006847 6.3e-27 124.4 80 70.0
C08p11690 Brassica napus HOM05D005617 ORTHO05D006847 6.3e-27 124.4 80 68.8
SGA_v2.0_scaffold380G50362 Striga asiatica HOM05D005617 ORTHO05D006847 6.3e-27 124.4 83 72.3
Cpa.g.c45301 Carica papaya HOM05D005617 ORTHO05D006847 1.1e-26 123.6 75 76.0
SMO116G0251 Selaginella moellendorffii HOM05D005617 ORTHO05D006847 1.8e-26 122.9 115 49.6
C08p11650 Brassica napus HOM05D005617 ORTHO05D006847 5.4e-26 121.3 80 68.8
MELO3C020566.2 Cucumis melo HOM05D005617 ORTHO05D006847 5.4e-26 121.3 70 81.4
BolC8t48841H Brassica oleracea HOM05D005617 ORTHO05D006847 5.0e-24 114.8 81 67.9
AagrBONN_evm.TU.Sc2ySwM_344.3205 Anthoceros agrestis HOM05D005617 ORTHO05D006847 6.6e-24 114.4 112 48.2
Pp3c23_15250 Physcomitrium patens HOM05D005617 ORTHO05D006847 8.6e-24 114.0 123 47.2
TAR365G0454 Trochodendron aralioides HOM05D005617 ORTHO05D006847 2.9e-19 99.0 112 52.7
C08p12050 Brassica napus HOM05D005617 ORTHO05D006847 1.1e-18 97.1 118 49.2
CBR_g63068 Chara braunii HOM05D005617 ORTHO05D006847 5.6e-15 84.7 113 38.9
SHI23140 Sapria himalayana HOM05D005617 ORTHO05D001257 1.7e-11 73.2 53 54.7
Cpa.g.sc162.39 Carica papaya HOM05D005617 ORTHO05D006847 6.4e-11 71.2 38 86.8
BcaB01g02218 Brassica carinata HOM05D005617 ORTHO05D006847 1.4e-10 70.1 50 70.0
PRCOL_00005829 Prasinoderma coloniale HOM05D005617 ORTHO05D006847 1.9e-07 59.7 108 27.8
PRCOL_00003784 Prasinoderma coloniale HOM05D005182 ORTHO05D006847 8.1e-06 54.3 97 26.8
TPR.G11236 Trifolium pratense HOM05D005617 ORTHO05D006847 8.1e-06 54.3 32 68.8


User provided reference genes

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