Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2175 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 1.8e-142 509.2 255 100.0
CDE07G0245 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 4.2e-99 365.2 220 84.5
TWI56G1112 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 3.7e-79 298.9 261 58.6
MELO3C010785.2 Cucumis melo HOM05D007224 ORTHO05D009169 4.8e-79 298.5 261 59.0
GSVIVG01009296001 Vitis vinifera HOM05D007224 ORTHO05D009169 6.3e-79 298.1 263 59.3
CsaV3_2G025920 Cucumis sativus L. HOM05D007224 ORTHO05D009169 1.4e-78 297.0 261 57.9
THA.LOC104799830 Tarenaya hassleriana HOM05D007224 ORTHO05D009169 1.8e-78 296.6 270 56.3
MD15G1064800 Malus domestica HOM05D007224 ORTHO05D009169 2.4e-78 296.2 276 56.5
TWI12G0175 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 2.4e-78 296.2 261 58.2
Atru.chr13.874 Acer truncatum HOM05D007224 ORTHO05D009169 5.4e-78 295.0 249 59.4
Duzib116G0584 Durio zibethinus HOM05D007224 ORTHO05D009169 1.6e-77 293.5 263 59.3
RcHm_v2.0_Chr6g0310081 Rosa chinensis HOM05D007224 ORTHO05D009169 1.0e-76 290.8 270 57.8
Ciclev10002194m.g Citrus clementina HOM05D007224 ORTHO05D009169 1.3e-76 290.4 255 58.0
MD08G1077300 Malus domestica HOM05D007224 ORTHO05D009169 2.9e-76 289.3 275 57.1
Nn5g30669 Nelumbo nucifera HOM05D007224 ORTHO05D009169 8.6e-76 287.7 257 57.6
PSO541G3785 Papaver somniferum HOM05D007224 ORTHO05D009169 4.2e-75 285.4 269 56.5
ClCG08G016710 Citrullus lanatus HOM05D007224 ORTHO05D009169 1.2e-74 283.9 251 57.8
Ca_06981_v3 Cicer arietinum L. HOM05D007224 ORTHO05D009169 1.4e-73 280.4 254 57.5
TAR628G0831 Trochodendron aralioides HOM05D007224 ORTHO05D009169 1.4e-73 280.4 258 57.0
Gohir.A06G026200 Gossypium hirsutum HOM05D007224 ORTHO05D009169 5.2e-73 278.5 263 55.9
Gohir.D06G023300 Gossypium hirsutum HOM05D007224 ORTHO05D009169 6.8e-73 278.1 268 56.0
CANSAT56G0920 Cannabis sativa HOM05D007224 ORTHO05D009169 8.9e-73 277.7 269 56.1
Gorai.010G028000 Gossypium raimondii HOM05D007224 ORTHO05D009169 8.9e-73 277.7 266 56.0
Lj5g0004917 Lotus japonicus HOM05D007224 ORTHO05D009169 1.5e-72 276.9 268 55.6
CiPaw.07G171700 Carya illinoinensis HOM05D007224 ORTHO05D009169 2.6e-72 276.2 266 58.3
TPR.G13169 Trifolium pratense HOM05D007224 ORTHO05D009169 3.4e-72 275.8 255 54.5
AL1G52590 Arabidopsis lyrata HOM05D007224 ORTHO05D009169 4.4e-72 275.4 264 54.9
FAN20G0095 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.7e-71 273.5 267 54.7
AT1G44920 Arabidopsis thaliana HOM05D007224 ORTHO05D009169 2.8e-71 272.7 261 55.2
PSO675G4824 Papaver somniferum HOM05D007224 ORTHO05D009169 1.1e-70 270.8 272 54.0
Thhalv10011734m.g Eutrema salsugineum HOM05D007224 ORTHO05D009169 1.4e-70 270.4 217 59.4
FAN27G0962 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.8e-70 270.0 263 54.8
A10p07160 Brassica napus HOM05D007224 ORTHO05D009169 3.2e-70 269.2 217 58.1
FvH4_2g32650 Fragaria vesca HOM05D007224 ORTHO05D009169 4.1e-70 268.9 270 54.1
CAN.G1239.16 Capsicum annuum HOM05D007224 ORTHO05D009169 1.2e-69 267.3 274 53.6
Phvul.001G031100 Phaseolus vulgaris HOM05D007224 ORTHO05D009169 3.5e-69 265.8 249 54.6
Sp1g33790 Schrenkiella parvula HOM05D007224 ORTHO05D009169 4.5e-69 265.4 217 57.1
BcaC08g42889 Brassica carinata HOM05D007224 ORTHO05D009169 5.9e-69 265.0 260 52.3
Psat6g017040 Pisum sativum HOM05D007224 ORTHO05D009169 1.0e-68 264.2 251 54.6
Sc26g0004240 Simmondsia chinensis HOM05D007224 ORTHO05D009169 2.3e-68 263.1 257 53.7
Carub.0001s3542 Capsella rubella HOM05D007224 ORTHO05D009169 5.0e-68 261.9 263 53.6
HanXRQChr04g0110471 Helianthus annuus HOM05D007224 ORTHO05D009169 6.6e-68 261.5 256 55.5
Nitab4.5_0001494g0030 Nicotiana tabacum HOM05D007224 ORTHO05D009169 8.6e-68 261.2 288 52.4
Solyc04g077500.4 Solanum lycopersicum HOM05D007224 ORTHO05D009169 8.6e-68 261.2 282 51.8
Glyma.17G232300 Glycine max HOM05D007224 ORTHO05D009169 1.1e-67 260.8 251 53.4
Cfa013733 Carpinus fangiana HOM05D007224 ORTHO05D009169 1.5e-67 260.4 265 55.1
vmacro21415 Vaccinium macrocarpon HOM05D007224 ORTHO05D009169 1.5e-67 260.4 273 53.1
Sopen04g031100 Solanum pennellii HOM05D007224 ORTHO05D009169 1.9e-67 260.0 282 51.4
CARHR036150 Cardamine hirsuta HOM05D007224 ORTHO05D009169 3.3e-67 259.2 185 64.9
Hund05274 Selenicereus undatus HOM05D007224 ORTHO05D009169 3.3e-67 259.2 264 51.9
VMungo0647G2475 Vigna mungo HOM05D007224 ORTHO05D009169 3.3e-67 259.2 248 54.4
DCAR_009866 Daucus carota HOM05D007224 ORTHO05D009169 4.3e-67 258.8 236 56.4
CSS0049759 Camellia sinensis var. sinensis HOM05D007224 ORTHO05D009169 5.6e-67 258.5 234 58.1
Potri.002G114900 Populus trichocarpa HOM05D007224 ORTHO05D009169 7.3e-67 258.1 266 54.5
FAN15G3290 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.6e-66 256.9 183 66.7
Medtr1g017450 Medicago truncatula HOM05D007224 ORTHO05D009169 2.8e-66 256.1 239 56.1
Prupe.1G418700 Prunus persica HOM05D007224 ORTHO05D009169 2.8e-66 256.1 273 52.0
PGR083G2708 Punica granatum HOM05D007224 ORTHO05D009169 3.6e-66 255.8 261 52.9
Ah.11g039150 Amaranthus hybridus HOM05D007224 ORTHO05D009169 4.7e-66 255.4 275 52.4
PGSC0003DMG400004920 Solanum tuberosum HOM05D007224 ORTHO05D009169 4.7e-66 255.4 194 64.9
Thecc.08G084200 Theobroma cacao HOM05D007224 ORTHO05D009169 4.7e-66 255.4 267 53.9
Actinidia10224 Actinidia chinensis HOM05D007224 ORTHO05D009169 6.1e-66 255.0 251 54.6
BcaB07g33899 Brassica carinata HOM05D007224 ORTHO05D009169 1.0e-65 254.2 217 55.3
Lj4A752T19 Lonicera japonica HOM05D007224 ORTHO05D009169 1.0e-65 254.2 252 54.4
Manes.18G049850 Manihot esculenta HOM05D007224 ORTHO05D009169 1.4e-65 253.8 274 52.9
Aa31LG7G10090 Aethionema arabicum HOM05D007224 ORTHO05D009169 3.1e-65 252.7 288 50.0
MSTRG.22207 Avicennia marina HOM05D007224 ORTHO05D009169 3.1e-65 252.7 246 53.7
FAN24G0100 Fragaria x ananassa HOM05D007224 ORTHO05D009169 3.1e-65 252.7 269 51.3
BolC6t35243H Brassica oleracea HOM05D007224 ORTHO05D009169 1.2e-64 250.8 278 48.6
SalBow7G4028 Salvia bowleyana HOM05D007224 ORTHO05D009169 1.5e-64 250.4 236 55.1
ATR0739G089 Amborella trichopoda HOM05D007224 ORTHO05D009169 3.4e-64 249.2 184 65.2
C06p01100 Brassica napus HOM05D007224 ORTHO05D009169 5.8e-64 248.4 251 51.0
Lalb_Chr22g0355811 Lupinus albus HOM05D007224 ORTHO05D009169 9.8e-64 247.7 268 50.4
unitig_52.g17426 Utricularia gibba HOM05D007224 ORTHO05D009169 9.8e-64 247.7 208 60.1
BraA10t42965Z Brassica rapa HOM05D007224 ORTHO05D009169 2.9e-63 246.1 233 51.9
Rhsim06G0064800 Rhododendron simsii HOM05D007224 ORTHO05D009169 4.9e-63 245.4 251 53.0
HPP92_007712 Vanilla planifolia HOM05D007224 ORTHO05D009169 4.9e-63 245.4 266 52.3
Haze_22381 Corylus avellana HOM05D007224 ORTHO05D009169 1.4e-62 243.8 237 54.4
MBI16_g06074_MAGBIO Magnolia biondii HOM05D007224 ORTHO05D009169 1.9e-62 243.4 253 54.2
Zm00001eb056020 Zea mays HOM05D007224 ORTHO05D009169 2.4e-62 243.0 263 52.1
Dinv44928 Davidia involucrata HOM05D007224 ORTHO05D009169 3.5e-61 239.2 179 63.7
Migut.C00453 Erythranthe guttata HOM05D007224 ORTHO05D009169 1.3e-60 237.3 257 50.6
Sabra02G0090900 Salix brachista HOM05D007224 ORTHO05D009169 3.9e-60 235.7 313 45.7
EL10Ac1g02348 Beta vulgaris HOM05D007224 ORTHO05D009169 5.0e-60 235.3 233 54.5
Lsat_1_v5_gn_0_47281 Lactuca sativa HOM05D007224 ORTHO05D009169 8.6e-60 234.6 223 53.8
COL.COLO4_28456 Corchorus olitorius HOM05D007224 ORTHO05D009169 1.1e-59 234.2 244 50.4
Aqoxy6G02448 Aquilegia oxysepala HOM05D007224 ORTHO05D009169 9.5e-59 231.1 266 49.6
Peaxi162Scf01161g00120 Petunia axillaris HOM05D007224 ORTHO05D009169 9.5e-59 231.1 270 50.0
SGA_v2.0_scaffold238G43907 Striga asiatica HOM05D007224 ORTHO05D009169 3.6e-58 229.2 268 48.1
Cc10_g07670 Coffea canephora HOM05D007224 ORTHO05D009169 4.7e-58 228.8 246 52.8
arahy.Tifrunner.gnm1.ann1.TQ0B6U Arachis hypogaea HOM05D007224 ORTHO05D009169 1.3e-55 220.7 255 49.4
Os03g0729100 Oryza sativa ssp. japonica HOM05D007224 ORTHO05D009169 3.5e-53 212.6 193 54.9
ECA232G4225 Erigeron canadensis HOM05D007224 ORTHO05D009169 1.1e-51 207.6 138 70.3
Nitab4.5_0010252g0010 Nicotiana tabacum HOM05D007224 ORTHO05D009169 1.1e-51 207.6 185 58.4
Mapoly0039s0075 Marchantia polymorpha HOM05D007224 ORTHO05D009169 5.8e-48 195.3 176 53.4
Pp3c6_15140 Physcomitrium patens HOM05D007224 ORTHO05D009169 3.9e-44 182.6 250 42.4
arahy.Tifrunner.gnm1.ann1.XZQ8AB Arachis hypogaea HOM05D007224 ORTHO05D009169 2.5e-43 179.9 227 45.8
SMO147G0155 Selaginella moellendorffii HOM05D007224 ORTHO05D009169 7.3e-43 178.3 178 47.2
Actinidia19293 Actinidia chinensis HOM05D007224 ORTHO05D009169 4.0e-41 172.6 175 52.0
Sed0020426 Sechium edule HOM05D007224 ORTHO05D009169 2.0e-40 170.2 188 50.5
CBR_g45556 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-39 167.5 179 47.5
Haze_22389 Corylus avellana HOM05D007224 ORTHO05D009169 2.8e-34 149.8 194 49.5
Cre13.g569250 Chlamydomonas reinhardtii HOM05D007224 ORTHO05D009169 9.3e-30 134.8 176 44.9
Glyma.14G089100 Glycine max HOM05D007224 ORTHO05D009169 8.7e-28 128.3 92 63.0
AUR62024535 Chenopodium quinoa HOM05D007224 ORTHO05D009169 5.6e-27 125.6 83 67.5
AUR62033890 Chenopodium quinoa HOM05D007224 ORTHO05D009169 4.0e-25 119.4 78 70.5
Cpa.g.sc2059.2 Carica papaya HOM05D007224 ORTHO05D009169 1.4e-22 110.9 155 44.5
Zm00001eb035950 Zea mays HOM05D007224 ORTHO05D009169 4.2e-22 109.4 76 68.4
MCO05G240 Micromonas commoda HOM05D007224 ORTHO05D009169 1.3e-20 104.4 152 38.8
Zm00001eb141580 Zea mays HOM05D007224 ORTHO05D445531 4.2e-14 82.8 95 46.3
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 5.3e-09 65.9 53 62.3


User provided reference genes

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