Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.9e-206 722.2 357 100.0
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 7.6e-155 550.8 299 92.0
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 1.3e-130 470.3 342 68.7
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.1e-128 463.0 337 68.0
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 8.7e-127 457.6 347 63.7
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 3.3e-126 455.7 334 66.5
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 3.3e-126 455.7 327 67.0
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 8.2e-125 451.1 325 68.0
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 2.4e-124 449.5 336 65.2
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 3.1e-124 449.1 325 67.7
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 1.5e-123 446.8 328 66.8
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 1.5e-123 446.8 337 65.6
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 2.0e-123 446.4 340 62.9
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 2.6e-123 446.0 336 65.2
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 4.5e-123 445.3 337 64.4
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 1.7e-122 443.4 324 67.0
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 1.7e-122 443.4 339 63.7
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 3.8e-122 442.2 337 65.6
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 8.5e-122 441.0 339 63.7
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.5e-121 439.5 339 63.1
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 4.2e-121 438.7 337 62.9
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 9.4e-121 437.6 327 64.8
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 1.6e-120 436.8 329 65.7
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.6e-120 436.8 339 62.8
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 3.6e-120 435.6 339 63.1
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 6.1e-120 434.9 337 65.0
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.3e-119 433.0 341 62.5
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 2.3e-119 433.0 339 63.1
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 3.9e-119 432.2 327 63.9
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 3.9e-119 432.2 343 61.5
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 8.8e-119 431.0 322 65.5
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 8.8e-119 431.0 314 67.2
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 1.5e-118 430.3 332 63.0
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 7.4e-118 427.9 333 64.9
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 2.2e-117 426.4 338 60.9
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 2.8e-117 426.0 327 62.7
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 4.8e-117 425.2 330 61.8
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 6.3e-117 424.9 325 64.3
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 6.3e-117 424.9 332 61.1
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 1.1e-116 424.1 338 61.5
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 1.4e-116 423.7 338 63.3
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.4e-116 423.7 328 61.9
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 1.8e-116 423.3 340 61.2
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 3.1e-116 422.5 332 62.3
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 5.3e-116 421.8 344 61.9
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 6.9e-116 421.4 333 61.3
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 6.9e-116 421.4 335 60.3
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 9.1e-116 421.0 330 62.4
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 9.1e-116 421.0 330 62.4
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 9.1e-116 421.0 330 62.4
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 9.1e-116 421.0 328 62.2
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 1.2e-115 420.6 333 62.8
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 1.2e-115 420.6 320 64.1
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 2.6e-115 419.5 334 62.6
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 2.6e-115 419.5 329 62.0
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 2.6e-115 419.5 331 60.4
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 2.6e-115 419.5 329 61.1
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 2.6e-115 419.5 328 61.9
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 3.4e-115 419.1 350 60.3
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 4.5e-115 418.7 330 62.1
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 4.5e-115 418.7 330 62.1
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 5.9e-115 418.3 342 58.8
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 7.7e-115 417.9 337 61.7
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.0e-114 417.5 335 60.6
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.0e-114 417.5 329 61.1
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 1.3e-114 417.2 323 61.6
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 2.2e-114 416.4 328 61.9
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 2.9e-114 416.0 329 61.4
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 3.8e-114 415.6 330 60.6
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 8.5e-114 414.5 329 61.4
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 1.1e-113 414.1 322 60.6
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 1.1e-113 414.1 337 60.8
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 1.4e-113 413.7 329 61.1
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 1.9e-113 413.3 336 61.3
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 4.2e-113 412.1 359 57.9
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 7.2e-113 411.4 327 61.2
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 1.6e-112 410.2 350 59.4
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 1.6e-112 410.2 328 61.0
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 2.1e-112 409.8 335 60.3
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 4.7e-112 408.7 321 62.6
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.8e-111 406.8 342 61.1
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 2.3e-111 406.4 325 60.3
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 2.0e-110 403.3 314 63.4
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 3.3e-110 402.5 338 59.5
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 5.0e-106 388.7 334 56.9
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 6.5e-106 388.3 323 58.5
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 1.5e-105 387.1 343 58.9
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 5.5e-105 385.2 327 59.0
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 6.8e-95 351.7 341 53.4
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 7.5e-94 348.2 338 52.7
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 9.8e-94 347.8 323 55.1
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 1.6e-91 340.5 316 53.8
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 2.9e-90 336.3 313 54.0
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 5.4e-84 315.5 313 54.3
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 8.6e-82 308.1 311 51.1
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 7.3e-81 305.1 338 47.6
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 4.4e-78 295.8 265 58.9
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 4.1e-76 289.3 209 67.5
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 1.7e-69 267.3 201 64.7
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.4e-68 263.5 208 61.5
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 5.1e-58 229.2 204 54.9
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 5.6e-57 225.7 159 69.2
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 2.6e-54 216.9 186 57.0
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 2.9e-53 213.4 158 65.2
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.0e-50 204.9 289 43.3
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 3.6e-48 196.4 246 44.7
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 4.7e-48 196.1 128 71.9
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.8e-47 194.1 161 62.7
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.9e-44 184.1 160 58.1
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.1e-40 170.6 130 64.6
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.0e-34 150.2 149 51.7
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 3.7e-32 143.3 88 75.0
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.9e-25 120.9 131 48.9
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.0e-18 97.1 103 40.8
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 1.3e-16 91.7 320 29.4
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 3.4e-14 83.6 123 39.8
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.0e-13 82.0 73 58.9
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 4.6e-11 73.2 155 34.8
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 3.0e-10 70.5 70 48.6
Cre16.g655900 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 2.0e-06 57.8 248 27.8
MCO05G745 Micromonas commoda HOM05D006598 ORTHO05D269324 5.9e-06 56.2 240 28.8


User provided reference genes

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