Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2145 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 2.1e-169 599.0 302 100.0
CDE04G2770 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 1.1e-154 550.1 294 97.3
TAR633G1775 Trochodendron aralioides HOM05D005913 ORTHO05D007138 9.8e-71 271.2 219 66.7
Nn2g15825 Nelumbo nucifera HOM05D005913 ORTHO05D007138 9.2e-69 264.6 247 60.3
CSS0006724 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 3.5e-68 262.7 211 67.3
CSS0022052 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 3.5e-68 262.7 211 67.3
Hma1.2p1_1287F.1_g273300 Hydrangea macrophylla HOM05D005913 ORTHO05D007138 1.5e-66 257.3 230 61.7
Dinv25093 Davidia involucrata HOM05D005913 ORTHO05D007138 2.5e-66 256.5 210 66.2
GSVIVG01024730001 Vitis vinifera HOM05D005913 ORTHO05D007138 3.3e-66 256.1 244 59.4
QL05p072708 Quercus lobata HOM05D005913 ORTHO05D007138 2.1e-65 253.4 214 64.0
TWI31G0765 Tripterygium wilfordii HOM05D005913 ORTHO05D007138 2.8e-65 253.1 202 66.3
Duzib150G0854 Durio zibethinus HOM05D005913 ORTHO05D007138 6.2e-65 251.9 200 69.0
TAR369G0609 Trochodendron aralioides HOM05D005913 ORTHO05D007138 1.1e-64 251.1 244 59.4
Sc21g0006400 Simmondsia chinensis HOM05D005913 ORTHO05D007138 3.4e-63 246.1 201 69.2
Sc21g0006380 Simmondsia chinensis HOM05D005913 ORTHO05D007138 4.4e-63 245.7 210 67.1
Nitab4.5_0000037g0040 Nicotiana tabacum HOM05D005913 ORTHO05D007138 5.8e-63 245.4 200 66.5
vmacro14595 Vaccinium macrocarpon HOM05D005913 ORTHO05D007138 2.9e-62 243.0 215 64.7
CsaV3_6G016190 Cucumis sativus L. HOM05D005913 ORTHO05D007138 3.7e-62 242.7 222 62.6
Dinv28648 Davidia involucrata HOM05D005913 ORTHO05D007138 3.7e-62 242.7 231 59.7
CiPaw.13G076700 Carya illinoinensis HOM05D005913 ORTHO05D007138 6.4e-62 241.9 221 63.3
MELO3C025845.2 Cucumis melo HOM05D005913 ORTHO05D007138 4.1e-61 239.2 232 60.3
ATR0681G105 Amborella trichopoda HOM05D005913 ORTHO05D007138 5.4e-61 238.8 207 62.8
Oeu008301.1 Olea europaea HOM05D005913 ORTHO05D007138 5.4e-61 238.8 210 61.4
Peaxi162Scf00228g00514 Petunia axillaris HOM05D000044 ORTHO05D007138 7.1e-61 238.4 200 64.5
Gorai.013G259900 Gossypium raimondii HOM05D005913 ORTHO05D007138 1.6e-60 237.3 227 58.1
Gohir.D13G228900 Gossypium hirsutum HOM05D005913 ORTHO05D007138 4.6e-60 235.7 227 57.7
Rhsim01G0236700 Rhododendron simsii HOM05D005913 ORTHO05D007138 6.0e-60 235.3 244 57.0
Cpa.g.sc112.8 Carica papaya HOM05D005913 ORTHO05D007138 2.3e-59 233.4 206 63.1
Lj3A585T46 Lonicera japonica HOM05D005913 ORTHO05D007138 2.3e-59 233.4 207 63.3
Thecc.09G300200 Theobroma cacao HOM05D005913 ORTHO05D007138 2.3e-59 233.4 205 62.0
Lsat_1_v5_gn_9_20000 Lactuca sativa HOM05D005913 ORTHO05D007138 5.1e-59 232.3 200 64.5
Sopen10g034140 Solanum pennellii HOM05D005913 ORTHO05D007138 6.6e-59 231.9 228 58.8
PSO675G7356 Papaver somniferum HOM05D005913 ORTHO05D007138 1.9e-58 230.3 221 60.6
Solyc10g084700.2 Solanum lycopersicum HOM05D005913 ORTHO05D007138 1.9e-58 230.3 228 58.3
Eucgr.J01039 Eucalyptus grandis HOM05D005913 ORTHO05D007138 3.3e-58 229.6 210 62.9
PGSC0003DMG402011001 Solanum tuberosum HOM05D005913 ORTHO05D007138 3.3e-58 229.6 200 63.5
CAN.G324.3 Capsicum annuum HOM05D005913 ORTHO05D007138 4.3e-58 229.2 235 55.3
PGSC0003DMG400016288 Solanum tuberosum HOM05D005913 ORTHO05D007138 4.3e-58 229.2 202 63.9
MSTRG.24154 Avicennia marina HOM05D005913 ORTHO05D007138 2.8e-57 226.5 213 61.0
ECA247G1367 Erigeron canadensis HOM05D005913 ORTHO05D007138 2.8e-57 226.5 198 61.6
CANSAT56G2716 Cannabis sativa HOM05D005913 ORTHO05D007138 6.2e-57 225.3 222 58.1
HanXRQChr16g0518331 Helianthus annuus HOM05D005913 ORTHO05D007138 1.4e-56 224.2 200 62.5
Sed0020527 Sechium edule HOM05D005913 ORTHO05D007138 1.8e-56 223.8 240 55.4
FAN25G2063 Fragaria x ananassa HOM05D005913 ORTHO05D007138 2.3e-56 223.4 233 55.4
PSO339G4526 Papaver somniferum HOM05D005913 ORTHO05D007138 2.3e-56 223.4 213 60.1
PSO801G0017 Papaver somniferum HOM05D005913 ORTHO05D007138 3.1e-56 223.0 221 59.7
Prupe.6G056500 Prunus persica HOM05D005913 ORTHO05D007138 3.1e-56 223.0 223 58.7
FAN11G0587 Fragaria x ananassa HOM05D005913 ORTHO05D007138 5.2e-56 222.2 233 56.2
COL.COLO4_19170 Corchorus olitorius HOM05D005913 ORTHO05D001548 6.8e-56 221.9 230 56.1
RcHm_v2.0_Chr5g0069871 Rosa chinensis HOM05D005913 ORTHO05D007138 6.8e-56 221.9 217 58.5
AUR62020144 Chenopodium quinoa HOM05D005913 ORTHO05D007138 2.0e-55 220.3 257 51.0
FvH4_3g38720 Fragaria vesca HOM05D005913 ORTHO05D007138 2.0e-55 220.3 230 54.8
Hund09257 Selenicereus undatus HOM05D005913 ORTHO05D007138 3.4e-55 219.5 249 53.8
Ciclev10029073m.g Citrus clementina HOM05D005913 ORTHO05D007138 4.4e-55 219.2 245 55.1
AUR62001638 Chenopodium quinoa HOM05D005913 ORTHO05D007138 5.8e-55 218.8 232 54.3
SGA_v2.0_scaffold25G11107 Striga asiatica HOM05D005913 ORTHO05D007138 5.8e-55 218.8 199 62.8
Manes.10G106300 Manihot esculenta HOM05D005913 ORTHO05D007138 9.9e-55 218.0 231 56.7
FAN21G0630 Fragaria x ananassa HOM05D005913 ORTHO05D007138 1.3e-54 217.6 232 55.2
Lalb_Chr19g0128221 Lupinus albus HOM05D005913 ORTHO05D007138 1.3e-54 217.6 246 54.1
DCAR_012499 Daucus carota HOM05D005913 ORTHO05D007138 1.7e-54 217.2 229 55.9
PGR044G1475 Punica granatum HOM05D005913 ORTHO05D007138 1.7e-54 217.2 211 59.2
MD11G1073200 Malus domestica HOM05D005913 ORTHO05D007138 2.9e-54 216.5 209 60.8
Gohir.A13G224200 Gossypium hirsutum HOM05D005913 ORTHO05D007138 4.9e-54 215.7 227 55.5
DCAR_002129 Daucus carota HOM05D005913 ORTHO05D007138 6.4e-54 215.3 211 58.8
FAN16G2194 Fragaria x ananassa HOM05D005913 ORTHO05D007138 1.4e-53 214.2 234 53.8
Cc01_g14290 Coffea canephora HOM05D005913 ORTHO05D007138 9.2e-53 211.5 195 60.5
HPP92_028632 Vanilla planifolia HOM05D005913 ORTHO05D007138 1.6e-52 210.7 217 53.5
Migut.N03298 Erythranthe guttata HOM05D005913 ORTHO05D007138 2.1e-52 210.3 201 61.2
Cfa011705 Carpinus fangiana HOM05D005913 ORTHO05D007138 1.0e-51 208.0 204 59.8
Sabra06G0131300 Salix brachista HOM05D005913 ORTHO05D007138 1.0e-51 208.0 213 58.7
Aqoxy4G02545 Aquilegia oxysepala HOM05D005913 ORTHO05D007138 6.6e-51 205.3 206 57.8
arahy.Tifrunner.gnm1.ann1.6RYY2X Arachis hypogaea HOM05D005913 ORTHO05D007138 5.6e-50 202.2 212 54.2
Potri.006G170500 Populus trichocarpa HOM05D005913 ORTHO05D007138 7.3e-50 201.8 205 59.5
QL01p038500 Quercus lobata HOM05D005913 ORTHO05D007138 1.6e-49 200.7 187 60.4
Haze_24336 Corylus avellana HOM05D005913 ORTHO05D007138 2.8e-49 199.9 227 53.7
HPP92_002930 Vanilla planifolia HOM05D005913 ORTHO05D007138 4.7e-49 199.1 168 63.1
LjContig00155g0009730 Lotus japonicus HOM05D005913 ORTHO05D007138 1.1e-48 198.0 242 50.8
Actinidia16099 Actinidia chinensis HOM05D005913 ORTHO05D007138 2.0e-47 193.7 213 55.9
Peaxi162Scf00384g00045 Petunia axillaris HOM05D005913 ORTHO05D007138 9.9e-47 191.4 200 54.5
Psat3g002480 Pisum sativum HOM05D005913 ORTHO05D007138 2.2e-46 190.3 198 57.1
VMungo0647G0764 Vigna mungo HOM05D005913 ORTHO05D007138 3.8e-46 189.5 250 48.8
Medtr7g117410 Medicago truncatula HOM05D005913 ORTHO05D007138 1.1e-45 188.0 198 57.6
Ca_09509_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 7.1e-45 185.3 216 53.2
Ca_30058_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 7.1e-45 185.3 216 53.2
Glyma.05G235600 Glycine max HOM05D005913 ORTHO05D007138 4.6e-44 182.6 214 51.4
Zm00001eb012770 Zea mays HOM05D005913 ORTHO05D007138 6.0e-44 182.2 237 48.9
Phvul.001G033300 Phaseolus vulgaris HOM05D005913 ORTHO05D007138 1.7e-43 180.6 159 62.3
Os10g0500500 Oryza sativa ssp. japonica HOM05D005913 ORTHO05D007138 3.0e-43 179.9 212 50.9
Lj4A493T9 Lonicera japonica HOM05D005913 ORTHO05D007138 1.9e-42 177.2 218 51.4
EL10Ac7g16180 Beta vulgaris HOM05D005913 ORTHO05D007138 2.1e-41 173.7 212 50.5
Thhalv10008508m.g Eutrema salsugineum HOM05D005913 ORTHO05D007138 6.2e-41 172.2 208 52.4
Ah.15g099480 Amaranthus hybridus HOM05D005913 ORTHO05D007138 1.1e-40 171.4 249 44.6
Zm00001eb142300 Zea mays HOM05D005913 ORTHO05D007138 2.6e-39 166.8 148 62.2
CARHR006930 Cardamine hirsuta HOM05D005913 ORTHO05D007138 1.7e-38 164.1 193 51.3
AT1G07210 Arabidopsis thaliana HOM05D005913 ORTHO05D007138 2.9e-38 163.3 215 48.8
AL1G17350 Arabidopsis lyrata HOM05D005913 ORTHO05D007138 1.4e-37 161.0 210 49.0
Sp1g05970 Schrenkiella parvula HOM05D005913 ORTHO05D007138 1.9e-37 160.6 211 48.3
Aa31LG1G6450 Aethionema arabicum HOM05D005913 ORTHO05D007138 5.4e-37 159.1 209 47.8
Carub.0001s0651 Capsella rubella HOM05D005913 ORTHO05D007138 7.1e-37 158.7 207 49.3
C05p05290 Brassica napus HOM05D005913 ORTHO05D007138 1.0e-35 154.8 206 49.0
C08p50760 Brassica napus HOM05D005913 ORTHO05D007138 1.3e-35 154.5 197 50.8
BolC8t52604H Brassica oleracea HOM05D005913 ORTHO05D007138 1.3e-35 154.5 197 50.8
BolC5t29300H Brassica oleracea HOM05D005913 ORTHO05D007138 1.7e-35 154.1 205 48.3
A10p05770 Brassica napus HOM05D005913 ORTHO05D007138 3.9e-35 152.9 239 43.5
BraA10t42838Z Brassica rapa HOM05D005913 ORTHO05D007138 3.9e-35 152.9 239 43.5
BcaC07g42020 Brassica carinata HOM05D005913 ORTHO05D007138 6.6e-35 152.1 197 50.3
BraA09t41996Z Brassica rapa HOM05D005913 ORTHO05D007138 6.6e-35 152.1 189 51.3
A09p66580 Brassica napus HOM05D005913 ORTHO05D007138 4.3e-34 149.4 218 47.7
unitig_26.g9973 Utricularia gibba HOM05D005913 ORTHO05D007138 4.3e-34 149.4 96 79.2
SalBow6G3913 Salvia bowleyana HOM05D005913 ORTHO05D007138 8.1e-33 145.2 297 37.7
BcaC07g42452 Brassica carinata HOM05D005913 ORTHO05D007138 2.6e-31 140.2 136 58.8
SEGI_23907 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 6.0e-28 129.0 145 49.7
TPR.G37238 Trifolium pratense HOM05D005913 ORTHO05D007138 6.0e-28 129.0 180 47.8
MD03G1068700 Malus domestica HOM05D005913 ORTHO05D007138 1.0e-27 128.3 74 87.8
Atru.chr3.4201 Acer truncatum HOM05D005913 ORTHO05D007138 2.5e-26 123.6 166 46.4
BcaC07g42451 Brassica carinata HOM05D005913 ORTHO05D007138 6.2e-25 119.0 80 75.0
Mapoly0046s0093 Marchantia polymorpha HOM05D005913 ORTHO05D007138 1.4e-21 107.8 195 38.5
Pp3c9_1670 Physcomitrium patens HOM05D005913 ORTHO05D007138 2.5e-21 107.1 195 37.4
BcaB07g33371 Brassica carinata HOM05D005913 ORTHO05D007138 4.2e-21 106.3 134 50.0
ClCG02G019520 Citrullus lanatus HOM05D005913 ORTHO05D007138 7.9e-20 102.1 114 52.6
TPR.G3936 Trifolium pratense HOM05D005913 ORTHO05D007138 5.1e-19 99.4 59 84.7
arahy.Tifrunner.gnm1.ann1.6CR394 Arachis hypogaea HOM05D005913 ORTHO05D007138 8.7e-19 98.6 59 84.7
AagrBONN_evm.TU.Sc2ySwM_362.942 Anthoceros agrestis HOM05D005913 ORTHO05D007138 1.1e-18 98.2 210 35.7
Peaxi162Scf00378g00212 Petunia axillaris HOM05D000011 ORTHO05D010520 7.6e-15 85.5 48 93.8
TPR.G4738 Trifolium pratense HOM05D005913 ORTHO05D007138 7.6e-15 85.5 183 36.1
SEGI_13957 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 1.9e-13 80.9 58 70.7
MD03G1068600 Malus domestica HOM05D005913 ORTHO05D007138 5.5e-13 79.3 134 44.0
Solyc01g058530.4 Solanum lycopersicum HOM05D005913 ORTHO05D007138 3.5e-12 76.6 58 65.5
CBR_g41534 Chara braunii HOM05D005913 ORTHO05D007138 1.1e-10 71.6 81 50.6
Atru.chr3.4202 Acer truncatum HOM05D005913 ORTHO05D007138 1.1e-08 65.1 39 82.1
SHI19145 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-06 58.2 110 37.3


User provided reference genes

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