Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2056 Ceratophyllum demersum HOM05D006515 ORTHO05D008125 7.7e-68 260.4 134 100.0
Manes.12G142600 Manihot esculenta HOM05D006515 ORTHO05D008125 3.2e-37 158.7 101 78.2
Nn5g28914 Nelumbo nucifera HOM05D006515 ORTHO05D008125 7.0e-37 157.5 105 78.1
Potri.005G084400 Populus trichocarpa HOM05D006515 ORTHO05D008125 9.2e-37 157.1 102 78.4
vmacro18633 Vaccinium macrocarpon HOM05D006515 ORTHO05D008125 9.2e-37 157.1 105 76.2
Rhsim08G0006500 Rhododendron simsii HOM05D006515 ORTHO05D008125 2.0e-36 156.0 134 61.9
Sabra05G0069400 Salix brachista HOM05D006515 ORTHO05D008125 4.6e-36 154.8 101 78.2
TAR628G1388 Trochodendron aralioides HOM05D006515 ORTHO05D008125 5.9e-36 154.5 133 63.9
MBI02_g20709_MAGBIO Magnolia biondii HOM05D006515 ORTHO05D008125 7.8e-36 154.1 105 74.3
MBI02_g45733_MAGBIO Magnolia biondii HOM05D006515 ORTHO05D008125 7.8e-36 154.1 105 74.3
Cfa002752 Carpinus fangiana HOM05D006515 ORTHO05D008125 1.0e-35 153.7 105 74.3
QL06p032194 Quercus lobata HOM05D006515 ORTHO05D008125 1.7e-35 152.9 106 74.5
Haze_25038 Corylus avellana HOM05D006515 ORTHO05D008125 2.3e-35 152.5 105 73.3
Duzib264G0250 Durio zibethinus HOM05D006515 ORTHO05D008125 2.3e-35 152.5 103 77.7
Glyma.08G141400 Glycine max HOM05D006515 ORTHO05D008125 2.3e-35 152.5 106 74.5
Lj4A877G29 Lonicera japonica HOM05D006515 ORTHO05D008125 2.3e-35 152.5 129 61.2
Sed0016096 Sechium edule HOM05D006515 ORTHO05D008125 2.3e-35 152.5 121 68.6
VMungo0251G1698 Vigna mungo HOM05D006515 ORTHO05D008125 2.3e-35 152.5 100 79.0
arahy.Tifrunner.gnm1.ann1.L5WCB3 Arachis hypogaea HOM05D006515 ORTHO05D008125 2.9e-35 152.1 100 78.0
CiPaw.04G091900 Carya illinoinensis HOM05D006515 ORTHO05D008125 2.9e-35 152.1 107 72.9
Rhsim08G0007200 Rhododendron simsii HOM05D006515 ORTHO05D008125 2.9e-35 152.1 134 60.4
Psat7g051400 Pisum sativum HOM05D006515 ORTHO05D008125 5.0e-35 151.4 100 77.0
Ca_17696_v3 Cicer arietinum L. HOM05D006515 ORTHO05D008125 6.6e-35 151.0 100 77.0
COL.COLO4_11014 Corchorus olitorius HOM05D006515 ORTHO05D008125 8.6e-35 150.6 109 73.4
Migut.H02429 Erythranthe guttata HOM05D006515 ORTHO05D008125 8.6e-35 150.6 99 78.8
Phvul.002G264700 Phaseolus vulgaris HOM05D006515 ORTHO05D008125 8.6e-35 150.6 100 79.0
GSVIVG01022225001 Vitis vinifera HOM05D006515 ORTHO05D008125 8.6e-35 150.6 105 73.3
MELO3C020948.2 Cucumis melo HOM05D006515 ORTHO05D008125 1.1e-34 150.2 101 76.2
CsaV3_2G017540 Cucumis sativus L. HOM05D006515 ORTHO05D008125 1.1e-34 150.2 101 76.2
Aqoxy6G00481 Aquilegia oxysepala HOM05D006515 ORTHO05D008125 1.5e-34 149.8 132 61.4
TPR.G34384 Trifolium pratense HOM05D006515 ORTHO05D008125 1.5e-34 149.8 141 58.9
Gohir.D03G046000 Gossypium hirsutum HOM05D006515 ORTHO05D008125 1.9e-34 149.4 112 71.4
Gorai.003G047200 Gossypium raimondii HOM05D006515 ORTHO05D008125 1.9e-34 149.4 112 71.4
Lj4g0022266 Lotus japonicus HOM05D006515 ORTHO05D008125 1.9e-34 149.4 106 71.7
Nitab4.5_0013619g0010 Nicotiana tabacum HOM05D005315 ORTHO05D008125 1.9e-34 149.4 122 67.2
TPR.G2156 Trifolium pratense HOM05D006515 ORTHO05D008125 1.9e-34 149.4 141 58.9
TWI74G0473 Tripterygium wilfordii HOM05D006515 ORTHO05D008125 1.9e-34 149.4 103 76.7
PGR004G2121 Punica granatum HOM05D006515 ORTHO05D008125 2.5e-34 149.1 105 73.3
Thecc.01G112600 Theobroma cacao HOM05D006515 ORTHO05D008125 2.5e-34 149.1 99 75.8
Eucgr.I00323 Eucalyptus grandis HOM05D006515 ORTHO05D008125 4.3e-34 148.3 101 75.2
Nitab4.5_0000431g0160 Nicotiana tabacum HOM05D006515 ORTHO05D008125 7.3e-34 147.5 104 76.9
Oeu028372.3 Olea europaea HOM05D006515 ORTHO05D008125 7.3e-34 147.5 99 76.8
PGSC0003DMG400023598 Solanum tuberosum HOM05D006515 ORTHO05D008125 7.3e-34 147.5 107 73.8
CANSAT01G1885 Cannabis sativa HOM05D006515 ORTHO05D008125 9.5e-34 147.1 102 75.5
Solyc04g011900.4 Solanum lycopersicum HOM05D006515 ORTHO05D008125 9.5e-34 147.1 109 72.5
SGA_v2.0_scaffold51G18748 Striga asiatica HOM05D006515 ORTHO05D008125 9.5e-34 147.1 99 74.7
FvH4_1g22260 Fragaria vesca HOM05D006515 ORTHO05D008125 1.2e-33 146.7 99 74.7
Lalb_Chr12g0203541 Lupinus albus HOM05D006515 ORTHO05D008125 1.2e-33 146.7 106 72.6
Zm00001eb069020 Zea mays HOM05D006515 ORTHO05D008125 1.6e-33 146.4 104 72.1
CAN.G1056.2 Capsicum annuum HOM05D006515 ORTHO05D008125 2.1e-33 146.0 92 79.3
BcaC02g08749 Brassica carinata HOM05D006515 ORTHO05D008125 2.8e-33 145.6 99 73.7
RcHm_v2.0_Chr2g0116401 Rosa chinensis HOM05D006515 ORTHO05D008125 2.8e-33 145.6 99 72.7
Atru.chr4.394 Acer truncatum HOM05D006515 ORTHO05D008125 6.2e-33 144.4 97 75.3
MSTRG.2534 Avicennia marina HOM05D006515 ORTHO05D008125 8.0e-33 144.1 99 73.7
ATR0564G276 Amborella trichopoda HOM05D000080 ORTHO05D008125 1.4e-32 143.3 117 66.7
Ciclev10026110m.g Citrus clementina HOM05D006515 ORTHO05D008125 1.4e-32 143.3 104 70.2
Peaxi162Scf00133g01415 Petunia axillaris HOM05D006515 ORTHO05D008125 1.4e-32 143.3 104 75.0
Sopen04g006040 Solanum pennellii HOM05D006515 ORTHO05D008125 1.4e-32 143.3 107 72.0
BcaB06g27799 Brassica carinata HOM05D006515 ORTHO05D008125 1.8e-32 142.9 99 72.7
BolC4t26701H Brassica oleracea HOM05D006515 ORTHO05D008125 1.8e-32 142.9 99 72.7
CSS0008392 Camellia sinensis var. sinensis HOM05D006515 ORTHO05D008125 1.8e-32 142.9 107 72.0
BraA04t17291Z Brassica rapa HOM05D006515 ORTHO05D008125 2.3e-32 142.5 99 71.7
Carub.0004s0110 Capsella rubella HOM05D006515 ORTHO05D008125 2.3e-32 142.5 117 63.2
Cc07_g16230 Coffea canephora HOM05D006515 ORTHO05D008125 2.3e-32 142.5 99 72.7
ECA238G1556 Erigeron canadensis HOM05D006515 ORTHO05D008125 2.3e-32 142.5 102 72.5
FAN19G0752 Fragaria x ananassa HOM05D006515 ORTHO05D008125 2.3e-32 142.5 108 70.4
Hund19656 Selenicereus undatus HOM05D006515 ORTHO05D008125 2.3e-32 142.5 99 71.7
EL10Ac6g14754 Beta vulgaris HOM05D006515 ORTHO05D008125 4.0e-32 141.7 98 72.4
MD15G1333200 Malus domestica HOM05D006515 ORTHO05D008125 4.0e-32 141.7 103 72.8
THA.LOC104807722 Tarenaya hassleriana HOM05D006515 ORTHO05D008125 5.2e-32 141.4 99 73.7
AL4G11280 Arabidopsis lyrata HOM05D006515 ORTHO05D008125 6.8e-32 141.0 97 72.2
Aa31LG7G14680 Aethionema arabicum HOM05D006515 ORTHO05D008125 8.9e-32 140.6 92 76.1
A04p16560 Brassica napus HOM05D006515 ORTHO05D008125 1.2e-31 140.2 99 70.7
HanXRQChr15g0484391 Helianthus annuus HOM05D006515 ORTHO05D008125 1.2e-31 140.2 101 73.3
Sp4g01040 Schrenkiella parvula HOM05D006515 ORTHO05D008125 1.2e-31 140.2 100 74.0
PSO541G0558 Papaver somniferum HOM05D006515 ORTHO05D008125 1.5e-31 139.8 110 64.5
AT2G21960 Arabidopsis thaliana HOM05D006515 ORTHO05D008125 2.0e-31 139.4 97 71.1
CSS0014645 Camellia sinensis var. sinensis HOM05D006515 ORTHO05D008125 2.0e-31 139.4 96 74.0
CARHR113040 Cardamine hirsuta HOM05D006515 ORTHO05D008125 2.0e-31 139.4 96 72.9
Thhalv10000230m.g Eutrema salsugineum HOM05D006515 ORTHO05D008125 2.0e-31 139.4 99 70.7
Sc07g0001530 Simmondsia chinensis HOM05D006515 ORTHO05D008125 5.8e-31 137.9 106 68.9
PSO675G2678 Papaver somniferum HOM05D006515 ORTHO05D008125 9.8e-31 137.1 110 64.5
AUR62016278 Chenopodium quinoa HOM05D006515 ORTHO05D008125 2.2e-30 136.0 124 59.7
C04p51080 Brassica napus HOM05D006515 ORTHO05D008125 3.7e-30 135.2 112 64.3
unitig_899.g15001 Utricularia gibba HOM05D006515 ORTHO05D008125 6.4e-30 134.4 117 64.1
Ah.02g125970 Amaranthus hybridus HOM05D006515 ORTHO05D008125 8.3e-30 134.0 133 56.4
AUR62003307 Chenopodium quinoa HOM05D006515 ORTHO05D008125 1.9e-29 132.9 110 61.8
Cpa.g.sc196.13 Carica papaya HOM05D006515 ORTHO05D008125 4.1e-29 131.7 83 79.5
HPP92_004318 Vanilla planifolia HOM05D006515 ORTHO05D008125 7.0e-29 131.0 105 64.8
FAN28G2568 Fragaria x ananassa HOM05D006515 ORTHO05D008125 1.2e-28 130.2 133 56.4
SalBow6G3287 Salvia bowleyana HOM05D006515 ORTHO05D008125 2.7e-28 129.0 80 77.5
SEGI_30317 Sequoiadendron giganteum HOM05D006515 ORTHO05D008125 8.6e-27 124.0 82 73.2
DCAR_010076 Daucus carota HOM05D006515 ORTHO05D008125 3.3e-26 122.1 83 74.7
SMO356G0225 Selaginella moellendorffii HOM05D006515 ORTHO05D008125 4.0e-24 115.2 82 70.7
arahy.Tifrunner.gnm1.ann1.M7EXEZ Arachis hypogaea HOM05D006515 ORTHO05D008125 2.9e-22 109.0 103 59.2
Lsat_1_v5_gn_1_15020 Lactuca sativa HOM05D006515 ORTHO05D008125 4.9e-22 108.2 136 50.0
FAN23G2782 Fragaria x ananassa HOM05D006515 ORTHO05D008125 6.4e-22 107.8 77 74.0
AagrBONN_evm.TU.Sc2ySwM_344.4911 Anthoceros agrestis HOM05D006515 ORTHO05D008125 1.4e-21 106.7 100 55.0
FAN26G2558 Fragaria x ananassa HOM05D006515 ORTHO05D008125 5.4e-21 104.8 78 69.2
Mapoly0125s0032 Marchantia polymorpha HOM05D006515 ORTHO05D008125 9.2e-21 104.0 99 53.5
ClCG02G013380 Citrullus lanatus HOM05D006515 ORTHO05D008125 3.9e-19 98.6 128 47.7
Pp3c15_14640 Physcomitrium patens HOM05D006515 ORTHO05D008125 3.9e-19 98.6 104 51.0
Gohir.A02G135100 Gossypium hirsutum HOM05D006515 ORTHO05D008125 2.8e-17 92.4 51 90.2
CSS0007670 Camellia sinensis var. sinensis HOM05D006515 ORTHO05D008125 3.6e-17 92.0 48 93.8
CSS0013135 Camellia sinensis var. sinensis HOM05D006515 ORTHO05D008125 3.6e-17 92.0 48 93.8
Dinv19488 Davidia involucrata HOM05D006515 ORTHO05D008125 3.6e-17 92.0 49 91.8
Prupe.6G173100 Prunus persica HOM05D006515 ORTHO05D008125 5.2e-16 88.2 49 85.7
Actinidia28893 Actinidia chinensis HOM05D006515 ORTHO05D008125 3.7e-14 82.0 114 49.1
Cre08.g379200 Chlamydomonas reinhardtii HOM05D006515 ORTHO05D008125 2.7e-12 75.9 80 53.8
Duzib264G0715 Durio zibethinus HOM05D006515 ORTHO05D008125 1.1e-10 70.5 52 69.2
Os09g0436500 Oryza sativa ssp. japonica HOM05D006515 ORTHO05D008125 3.3e-10 68.9 50 66.0
MBI06_g27505_MAGBIO Magnolia biondii HOM05D006515 ORTHO05D008125 3.8e-06 55.5 71 49.3


User provided reference genes

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