Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2046 Ceratophyllum demersum HOM05D005563 ORTHO05D006667 2.0e-146 522.3 247 100.0
TAR628G0232 Trochodendron aralioides HOM05D005563 ORTHO05D006667 2.1e-63 246.5 267 50.9
GSVIVG01037139001 Vitis vinifera HOM05D005563 ORTHO05D006667 3.6e-63 245.7 251 51.8
MBI14_g08074_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 4.7e-63 245.4 275 49.1
Dinv22054 Davidia involucrata HOM05D005563 ORTHO05D006667 1.1e-62 244.2 285 47.4
CANSAT64G1925 Cannabis sativa HOM05D005563 ORTHO05D006667 1.8e-62 243.4 265 50.9
PGR044G0823 Punica granatum HOM05D005563 ORTHO05D006667 1.2e-61 240.7 265 49.4
Nn5g27214 Nelumbo nucifera HOM05D005563 ORTHO05D006667 3.4e-61 239.2 261 47.5
Oeu019017.1 Olea europaea HOM05D005563 ORTHO05D006667 3.4e-61 239.2 274 48.9
Ciclev10020232m.g Citrus clementina HOM05D005563 ORTHO05D006667 9.8e-61 237.7 283 47.3
Cfa007306 Carpinus fangiana HOM05D005563 ORTHO05D006667 1.7e-60 236.9 269 48.3
Thecc.05G149300 Theobroma cacao HOM05D005563 ORTHO05D006667 1.1e-59 234.2 267 50.6
Migut.G00338 Erythranthe guttata HOM05D005563 ORTHO05D006667 1.4e-59 233.8 251 50.6
Oeu009445.1 Olea europaea HOM05D005563 ORTHO05D006667 3.2e-59 232.6 275 47.6
HanXRQChr15g0488461 Helianthus annuus HOM05D005563 ORTHO05D006667 5.4e-59 231.9 249 51.0
QL09p001227 Quercus lobata HOM05D005563 ORTHO05D006667 5.4e-59 231.9 264 48.1
TAR633G2728 Trochodendron aralioides HOM05D005563 ORTHO05D006667 5.4e-59 231.9 269 48.0
FvH4_2g00270 Fragaria vesca HOM05D005563 ORTHO05D006667 1.2e-58 230.7 258 49.6
Duzib177G0343 Durio zibethinus HOM05D005563 ORTHO05D006667 2.1e-58 229.9 265 50.6
PSO170G2533 Papaver somniferum HOM05D005563 ORTHO05D006667 4.6e-58 228.8 235 53.6
PSO761G0451 Papaver somniferum HOM05D005563 ORTHO05D006667 4.6e-58 228.8 276 47.5
Glyma.13G312100 Glycine max HOM05D005563 ORTHO05D006667 6.0e-58 228.4 263 48.7
CSS0040007 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 1.3e-57 227.3 266 48.9
Potri.013G094800 Populus trichocarpa HOM05D005563 ORTHO05D006667 2.3e-57 226.5 264 47.0
FAN24G3564 Fragaria x ananassa HOM05D005563 ORTHO05D006667 6.6e-57 224.9 279 46.2
Prupe.8G002700 Prunus persica HOM05D005563 ORTHO05D006667 6.6e-57 224.9 265 48.7
Lalb_Chr24g0393341 Lupinus albus HOM05D005563 ORTHO05D006667 8.6e-57 224.6 266 46.6
AUR62023340 Chenopodium quinoa HOM05D005563 ORTHO05D006667 1.1e-56 224.2 266 48.5
RcHm_v2.0_Chr6g0249561 Rosa chinensis HOM05D005563 ORTHO05D006667 1.5e-56 223.8 266 48.9
CSS0002080 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 1.9e-56 223.4 266 47.7
CiPaw.04G008700 Carya illinoinensis HOM05D005563 ORTHO05D006667 2.5e-56 223.0 275 47.3
Cc02_g22680 Coffea canephora HOM05D005563 ORTHO05D006667 3.3e-56 222.6 275 45.8
TPR.G23443 Trifolium pratense HOM05D005563 ORTHO05D006667 5.6e-56 221.9 278 46.4
Atru.chr13.2584 Acer truncatum HOM05D005563 ORTHO05D006667 7.3e-56 221.5 290 44.5
AUR62013814 Chenopodium quinoa HOM05D005563 ORTHO05D006667 7.3e-56 221.5 257 48.6
Medtr8g103020 Medicago truncatula HOM05D005563 ORTHO05D006667 1.2e-55 220.7 271 46.1
TWI18G0160 Tripterygium wilfordii HOM05D005563 ORTHO05D006667 1.2e-55 220.7 262 48.5
arahy.Tifrunner.gnm1.ann1.NB4SND Arachis hypogaea HOM05D005563 ORTHO05D006667 1.6e-55 220.3 269 47.2
AL2G30920 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 2.1e-55 219.9 251 46.2
ECA232G0495 Erigeron canadensis HOM05D004116 ORTHO05D004734 2.1e-55 219.9 246 48.4
Aqoxy1G00244 Aquilegia oxysepala HOM05D005563 ORTHO05D006667 2.8e-55 219.5 267 46.4
Sabra13G0080900 Salix brachista HOM05D005563 ORTHO05D006667 2.8e-55 219.5 264 47.0
Lj3g0011209 Lotus japonicus HOM05D005563 ORTHO05D006667 4.7e-55 218.8 262 48.5
Actinidia29363 Actinidia chinensis HOM05D005563 ORTHO05D006667 6.2e-55 218.4 265 45.7
arahy.Tifrunner.gnm1.ann1.QV839S Arachis hypogaea HOM05D005563 ORTHO05D006667 6.2e-55 218.4 269 46.8
AT5G24670 Arabidopsis thaliana HOM05D005563 ORTHO05D006667 1.1e-54 217.6 248 46.4
AL1G12770 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 1.8e-54 216.9 252 45.6
Eucgr.G00337 Eucalyptus grandis HOM05D005563 ORTHO05D006667 2.3e-54 216.5 237 51.9
VMungo1080G1448 Vigna mungo HOM05D005563 ORTHO05D006667 2.3e-54 216.5 262 47.7
Carub.0002s1819 Capsella rubella HOM05D005563 ORTHO05D006667 3.1e-54 216.1 249 46.2
Sed0012109 Sechium edule HOM05D005563 ORTHO05D006667 4.0e-54 215.7 264 48.1
SGA_v2.0_scaffold277G46672 Striga asiatica HOM05D005563 ORTHO05D006667 5.2e-54 215.3 249 48.2
Phvul.005G118600 Phaseolus vulgaris HOM05D005563 ORTHO05D006667 6.8e-54 214.9 265 46.8
CsaV3_6G042510 Cucumis sativus L. HOM05D005563 ORTHO05D006667 8.9e-54 214.5 267 46.8
Hund26934 Selenicereus undatus HOM05D005563 ORTHO05D006667 1.2e-53 214.2 264 44.7
THA.LOC104825030 Tarenaya hassleriana HOM05D005563 ORTHO05D006667 1.5e-53 213.8 250 48.4
Thhalv10018623m.g Eutrema salsugineum HOM05D005563 ORTHO05D006667 2.6e-53 213.0 256 46.1
Manes.18G108800 Manihot esculenta HOM05D005563 ORTHO05D006667 2.6e-53 213.0 269 45.4
PSO017G5640 Papaver somniferum HOM05D005563 ORTHO05D006667 2.6e-53 213.0 235 51.5
Rhsim01G0059200 Rhododendron simsii HOM05D005563 ORTHO05D006667 2.6e-53 213.0 275 45.5
ATR0580G344 Amborella trichopoda HOM05D005563 ORTHO05D006667 3.4e-53 212.6 264 46.2
A07p30780 Brassica napus HOM05D005563 ORTHO05D006667 4.4e-53 212.2 265 45.7
Sp5g26490 Schrenkiella parvula HOM05D005563 ORTHO05D006667 4.4e-53 212.2 266 44.4
BcaB03g14889 Brassica carinata HOM05D005563 ORTHO05D006667 7.6e-53 211.5 266 44.0
BcaB03g15600 Brassica carinata HOM05D005563 ORTHO05D006667 7.6e-53 211.5 260 44.2
Nitab4.5_0006591g0020 Nicotiana tabacum HOM05D005563 ORTHO05D006667 9.9e-53 211.1 262 46.2
C06p35680 Brassica napus HOM05D005563 ORTHO05D006667 1.3e-52 210.7 260 44.6
BolC6t38691H Brassica oleracea HOM05D005563 ORTHO05D006667 1.3e-52 210.7 260 44.6
Gorai.009G262600 Gossypium raimondii HOM05D005563 ORTHO05D006667 1.3e-52 210.7 261 46.7
vmacro07741 Vaccinium macrocarpon HOM05D005563 ORTHO05D006667 1.3e-52 210.7 283 45.2
BraA07t30715Z Brassica rapa HOM05D005563 ORTHO05D006667 1.7e-52 210.3 260 44.2
DCAR_027509 Daucus carota HOM05D005563 ORTHO05D006667 1.7e-52 210.3 277 43.3
BcaC08g45784 Brassica carinata HOM05D005563 ORTHO05D006667 2.2e-52 209.9 260 44.2
Nitab4.5_0001489g0080 Nicotiana tabacum HOM05D005563 ORTHO05D006667 2.9e-52 209.5 264 45.8
Rhsim01G0058900 Rhododendron simsii HOM05D005563 ORTHO05D006667 2.9e-52 209.5 277 46.6
ClCG11G000440 Citrullus lanatus HOM05D005563 ORTHO05D006667 3.7e-52 209.1 270 45.6
Psat7g014680 Pisum sativum HOM05D005563 ORTHO05D006667 3.7e-52 209.1 288 42.4
CARHR064610 Cardamine hirsuta HOM05D005563 ORTHO05D006667 4.9e-52 208.8 264 43.6
MD10G1001500 Malus domestica HOM05D005563 ORTHO05D006667 6.4e-52 208.4 268 47.8
EL10Ac1g00691 Beta vulgaris HOM05D005563 ORTHO05D006667 1.4e-51 207.2 262 45.8
PSO407G0243 Papaver somniferum HOM05D005563 ORTHO05D006667 1.4e-51 207.2 232 51.3
DCAR_010113 Daucus carota HOM05D005563 ORTHO05D006667 1.9e-51 206.8 281 43.4
Peaxi162Scf00078g01133 Petunia axillaris HOM05D005563 ORTHO05D006667 1.9e-51 206.8 266 45.9
DCAR_001180 Daucus carota HOM05D005563 ORTHO05D006667 2.4e-51 206.5 282 42.9
Lsat_1_v5_gn_4_170241 Lactuca sativa HOM05D005563 ORTHO05D006667 2.4e-51 206.5 269 44.6
Sopen03g004940 Solanum pennellii HOM05D005563 ORTHO05D006667 2.1e-50 203.4 257 47.5
Carub.0004s0662 Capsella rubella HOM05D005563 ORTHO05D006667 3.5e-50 202.6 245 45.3
HPP92_009712 Vanilla planifolia HOM05D005563 ORTHO05D006667 4.6e-50 202.2 244 47.5
Solyc03g026100.1 Solanum lycopersicum HOM05D005563 ORTHO05D006667 1.3e-49 200.7 265 45.7
Aa31LG4G9220 Aethionema arabicum HOM05D005563 ORTHO05D006667 3.0e-49 199.5 262 43.9
CAN.G587.23 Capsicum annuum HOM05D005563 ORTHO05D006667 6.6e-49 198.4 264 45.1
Nitab4.5_0000079g0140 Nicotiana tabacum HOM05D005563 ORTHO05D006667 8.6e-49 198.0 264 44.3
PGSC0003DMG400014277 Solanum tuberosum HOM05D005563 ORTHO05D006667 1.1e-48 197.6 264 45.1
Zm00001eb088860 Zea mays HOM05D005563 ORTHO05D006667 2.1e-47 193.4 265 43.0
CAN.G769.9 Capsicum annuum HOM05D005563 ORTHO05D006667 1.1e-46 191.0 272 42.3
Haze_14007 Corylus avellana HOM05D005563 ORTHO05D006667 1.4e-46 190.7 377 35.0
AUR62037990 Chenopodium quinoa HOM05D005563 ORTHO05D006667 3.4e-45 186.0 256 43.0
SHI17431 Sapria himalayana HOM05D005563 ORTHO05D006667 3.4e-45 186.0 238 45.4
Pp3c5_5220 Physcomitrium patens HOM05D005563 ORTHO05D006667 5.8e-37 158.7 228 42.5
BolC6t39597H Brassica oleracea HOM05D005563 ORTHO05D006667 1.4e-35 154.1 238 38.7
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 2.1e-34 150.2 227 40.1
MBI08_g10505_MAGBIO Magnolia biondii HOM05D000152 ORTHO05D006667 1.5e-32 144.1 85 76.5
TPR.G11340 Trifolium pratense HOM05D005563 ORTHO05D006667 1.5e-32 144.1 73 86.3
MBI14_g20078_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 1.9e-32 143.7 78 82.1
MBI13_g08747_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 1.6e-31 140.6 78 79.5
SMO356G0078 Selaginella moellendorffii HOM05D005563 ORTHO05D006667 1.6e-31 140.6 230 37.8
Eucgr.C03640 Eucalyptus grandis HOM05D005563 ORTHO05D006667 8.1e-31 138.3 89 74.2
Mapoly0019s0003 Marchantia polymorpha HOM05D005563 ORTHO05D006667 2.4e-30 136.7 148 48.0
MBI15_g36474_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 3.1e-30 136.3 78 76.9
FAN19G1429 Fragaria x ananassa HOM05D005563 ORTHO05D006667 1.5e-29 134.0 258 38.4
MELO3C022956.2 Cucumis melo HOM05D005563 ORTHO05D006667 1.3e-28 131.0 214 40.2
CBR_g8323 Chara braunii HOM05D005563 ORTHO05D006667 4.6e-26 122.5 170 40.6
AagrBONN_evm.TU.Sc2ySwM_344.1216 Anthoceros agrestis HOM05D005563 ORTHO05D006667 6.0e-26 122.1 315 30.2
MCO11G544 Micromonas commoda HOM05D005563 ORTHO05D006667 1.5e-24 117.5 218 33.5
CBR_g50242 Chara braunii HOM05D005563 ORTHO05D006667 2.5e-24 116.7 171 38.6
FAN20G2324 Fragaria x ananassa HOM05D005563 ORTHO05D006667 3.2e-19 99.8 54 85.2
Cre10.g439200 Chlamydomonas reinhardtii HOM05D005563 ORTHO05D006667 7.9e-18 95.1 175 33.7
COL.COLO4_34067 Corchorus olitorius HOM05D005563 ORTHO05D006667 1.0e-17 94.7 179 38.5
Ca_17321_v3 Cicer arietinum L. HOM05D005563 ORTHO05D006667 3.9e-17 92.8 165 35.2
BcaB03g14888 Brassica carinata HOM05D005563 ORTHO05D006667 1.9e-16 90.5 224 29.9
PRCOL_00003298 Prasinoderma coloniale HOM05D005563 ORTHO05D006667 2.5e-16 90.1 227 29.5
Gohir.A05G248000 Gossypium hirsutum HOM05D005563 ORTHO05D006667 1.6e-15 87.4 169 36.7
TPR.G11352 Trifolium pratense HOM05D005563 ORTHO05D006667 2.8e-15 86.7 172 34.3
Gohir.D05G248801 Gossypium hirsutum HOM05D005563 ORTHO05D006667 1.1e-14 84.7 169 36.1
Eucgr.C03478 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.5e-13 80.9 174 33.9
Eucgr.C03620 Eucalyptus grandis HOM05D005563 ORTHO05D006667 3.4e-13 79.7 150 38.0
DCAR_001179 Daucus carota HOM05D005563 ORTHO05D006667 7.6e-13 78.6 168 32.7
Sc19g0006900 Simmondsia chinensis HOM05D005563 ORTHO05D006667 2.2e-12 77.0 168 34.5
Eucgr.C03636 Eucalyptus grandis HOM05D005563 ORTHO05D006667 5.5e-11 72.4 161 35.4
Actinidia03534 Actinidia chinensis HOM05D005563 ORTHO05D006667 3.9e-09 66.2 165 32.7


User provided reference genes

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