Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2041 Ceratophyllum demersum HOM05D002857 ORTHO05D008347 1.4e-96 356.3 176 100.0
Nn5g30580 Nelumbo nucifera HOM05D002857 ORTHO05D008347 4.1e-69 265.0 165 75.2
Oeu010450.1 Olea europaea HOM05D002857 ORTHO05D008347 1.3e-67 260.0 168 72.0
Sabra09G0068300 Salix brachista HOM05D002857 ORTHO05D008347 1.7e-67 259.6 167 72.5
CSS0041876 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D008347 6.5e-67 257.7 165 70.9
GSVIVG01037837001 Vitis vinifera HOM05D002857 ORTHO05D008347 6.5e-67 257.7 162 75.3
Potri.009G088200 Populus trichocarpa HOM05D002857 ORTHO05D008347 8.6e-67 257.3 167 71.9
Atru.chr5.2351 Acer truncatum HOM05D002857 ORTHO05D008347 1.1e-66 256.9 165 70.9
Aqoxy6G02637 Aquilegia oxysepala HOM05D002857 ORTHO05D008347 1.1e-66 256.9 164 70.7
Ciclev10029201m.g Citrus clementina HOM05D002857 ORTHO05D008347 3.2e-66 255.4 163 70.6
TAR381G0590 Trochodendron aralioides HOM05D002857 ORTHO05D008347 7.2e-66 254.2 164 72.0
Manes.10G081600 Manihot esculenta HOM05D002857 ORTHO05D008347 9.5e-66 253.8 164 72.0
Hund00691 Selenicereus undatus HOM05D002857 ORTHO05D008347 1.6e-65 253.1 164 69.5
CiPaw.05G017800 Carya illinoinensis HOM05D002857 ORTHO05D008347 2.8e-65 252.3 165 72.1
COL.COLO4_32514 Corchorus olitorius HOM05D002857 ORTHO05D007919 2.8e-65 252.3 167 68.3
PSO541G0380 Papaver somniferum HOM05D002857 ORTHO05D008347 2.8e-65 252.3 171 67.8
Cpa.g.sc106.48 Carica papaya HOM05D002857 ORTHO05D008347 4.7e-65 251.5 174 69.0
Prupe.8G144800 Prunus persica HOM05D002857 ORTHO05D008347 6.1e-65 251.1 167 70.7
Duzib132G1128 Durio zibethinus HOM05D002857 ORTHO05D008347 1.0e-64 250.4 166 68.7
vmacro19465 Vaccinium macrocarpon HOM05D002857 ORTHO05D008347 2.3e-64 249.2 163 69.9
vmacro23229 Vaccinium macrocarpon HOM05D002857 ORTHO05D008347 2.3e-64 249.2 163 69.9
PSO675G0546 Papaver somniferum HOM05D002857 ORTHO05D008347 4.0e-64 248.4 171 67.8
MSTRG.27764 Avicennia marina HOM05D002857 ORTHO05D008347 5.2e-64 248.1 168 67.3
Lj4g0011899 Lotus japonicus HOM05D002857 ORTHO05D008347 5.2e-64 248.1 166 68.1
QL07p014115 Quercus lobata HOM05D002857 ORTHO05D008347 8.8e-64 247.3 161 72.7
SGA_v2.0_scaffold219G42527 Striga asiatica HOM05D002857 ORTHO05D008347 1.5e-63 246.5 168 67.3
AUR62027003 Chenopodium quinoa HOM05D002857 ORTHO05D008347 2.0e-63 246.1 165 69.7
Gohir.A12G019700 Gossypium hirsutum HOM05D002857 ORTHO05D008347 2.0e-63 246.1 168 66.1
CiPaw.06G165500 Carya illinoinensis HOM05D002857 ORTHO05D008347 3.4e-63 245.4 162 71.6
Dinv15807 Davidia involucrata HOM05D002857 ORTHO05D008347 3.4e-63 245.4 161 71.4
Gohir.D12G019900 Gossypium hirsutum HOM05D002857 ORTHO05D008347 3.4e-63 245.4 167 65.9
PGR120G0011 Punica granatum HOM05D002857 ORTHO05D008347 3.4e-63 245.4 167 68.9
PGR142G0748 Punica granatum HOM05D002857 ORTHO05D008347 3.4e-63 245.4 167 68.9
TWI14G1023 Tripterygium wilfordii HOM05D002857 ORTHO05D008347 3.4e-63 245.4 162 70.4
Eucgr.I01062 Eucalyptus grandis HOM05D002857 ORTHO05D008347 4.4e-63 245.0 166 68.7
unitig_749.g13509 Utricularia gibba HOM05D002857 ORTHO05D008347 4.4e-63 245.0 166 68.1
EL10Ac9g22202 Beta vulgaris HOM05D002857 ORTHO05D008347 5.7e-63 244.6 164 67.7
Gorai.008G020300 Gossypium raimondii HOM05D002857 ORTHO05D008347 5.7e-63 244.6 167 65.3
Potri.001G293700 Populus trichocarpa HOM05D002857 ORTHO05D008347 5.7e-63 244.6 167 67.7
TPR.G2009 Trifolium pratense HOM05D002857 ORTHO05D008347 5.7e-63 244.6 173 65.9
RcHm_v2.0_Chr6g0253801 Rosa chinensis HOM05D002857 ORTHO05D008347 9.8e-63 243.8 167 68.9
Nitab4.5_0008075g0040 Nicotiana tabacum HOM05D002857 ORTHO05D008347 1.7e-62 243.0 161 70.2
Actinidia34361 Actinidia chinensis HOM05D002857 ORTHO05D008347 2.8e-62 242.3 163 68.7
Solyc01g107020.4 Solanum lycopersicum HOM05D002857 ORTHO05D008347 2.8e-62 242.3 163 66.9
Haze_10256 Corylus avellana HOM05D002857 ORTHO05D008347 3.7e-62 241.9 164 68.9
Thecc.02G117000 Theobroma cacao HOM05D002857 ORTHO05D008347 3.7e-62 241.9 159 67.9
Cfa009507 Carpinus fangiana HOM05D002857 ORTHO05D008347 4.9e-62 241.5 164 68.9
FvH4_2g04342 Fragaria vesca HOM05D002857 ORTHO05D008347 4.9e-62 241.5 165 69.7
Medtr4g109520 Medicago truncatula HOM05D002857 ORTHO05D008347 4.9e-62 241.5 174 65.5
Peaxi162Scf00016g02839 Petunia axillaris HOM05D002857 ORTHO05D008347 4.9e-62 241.5 161 68.3
MD05G1100100 Malus domestica HOM05D002857 ORTHO05D008347 6.3e-62 241.1 165 69.1
CAN.G606.59 Capsicum annuum HOM05D002857 ORTHO05D008347 8.3e-62 240.7 163 66.3
Cfa004654 Carpinus fangiana HOM05D002857 ORTHO05D008347 8.3e-62 240.7 164 68.9
Lalb_Chr06g0165111 Lupinus albus HOM05D002857 ORTHO05D008347 1.1e-61 240.4 165 67.3
Phvul.003G185000 Phaseolus vulgaris HOM05D002857 ORTHO05D008347 1.1e-61 240.4 164 67.7
PGSC0003DMG400025744 Solanum tuberosum HOM05D002857 ORTHO05D008347 1.4e-61 240.0 165 66.1
ClCG10G010270 Citrullus lanatus HOM05D002857 ORTHO05D008347 2.4e-61 239.2 172 64.0
Lj5A219T41 Lonicera japonica HOM05D002857 ORTHO05D008347 2.4e-61 239.2 160 68.8
Psat0s3618g0120 Pisum sativum HOM05D002857 ORTHO05D008347 4.1e-61 238.4 172 64.0
Ca_21777_v3 Cicer arietinum L. HOM05D002857 ORTHO05D008347 5.4e-61 238.0 164 69.5
Glyma.17G078200 Glycine max HOM05D002857 ORTHO05D008347 7.0e-61 237.7 165 66.7
Nitab4.5_0001105g0010 Nicotiana tabacum HOM05D002857 ORTHO05D008347 7.0e-61 237.7 157 69.4
MD05G1100400 Malus domestica HOM05D002857 ORTHO05D008347 9.2e-61 237.3 165 67.9
Rhsim11G0152900 Rhododendron simsii HOM05D002133 ORTHO05D008347 9.2e-61 237.3 160 69.4
Lsat_1_v5_gn_1_103341 Lactuca sativa HOM05D002857 ORTHO05D008347 1.2e-60 236.9 163 68.1
Rhsim11G0151500 Rhododendron simsii HOM05D002133 ORTHO05D008347 3.5e-60 235.3 158 69.6
Cc02_g19860 Coffea canephora HOM05D002857 ORTHO05D008347 5.9e-60 234.6 169 66.3
Sopen01g049290 Solanum pennellii HOM05D002857 ORTHO05D008347 5.9e-60 234.6 161 65.8
DCAR_001699 Daucus carota HOM05D002857 ORTHO05D008347 7.8e-60 234.2 163 66.3
Migut.O00567 Erythranthe guttata HOM05D002857 ORTHO05D008347 7.8e-60 234.2 166 62.7
Cfa010108 Carpinus fangiana HOM05D002857 ORTHO05D008347 1.0e-59 233.8 166 66.9
MELO3C018011.2 Cucumis melo HOM05D002857 ORTHO05D008347 1.0e-59 233.8 165 63.6
Migut.N01136 Erythranthe guttata HOM05D002857 ORTHO05D008347 1.3e-59 233.4 166 62.7
HanXRQChr01g0025491 Helianthus annuus HOM05D002857 ORTHO05D008347 1.7e-59 233.0 171 64.3
SalBow3G3786 Salvia bowleyana HOM05D002857 ORTHO05D008347 1.7e-59 233.0 165 65.5
CANSAT35G0667 Cannabis sativa HOM05D002857 ORTHO05D008347 2.9e-59 232.3 163 64.4
CsaV3_4G000220 Cucumis sativus L. HOM05D002857 ORTHO05D008347 2.9e-59 232.3 164 64.0
VMungo1215G1881 Vigna mungo HOM05D002857 ORTHO05D008347 6.6e-59 231.1 157 68.2
Nn3g19581 Nelumbo nucifera HOM05D002857 ORTHO05D008347 1.9e-58 229.6 161 68.3
Sed0016408 Sechium edule HOM05D002857 ORTHO05D008347 5.6e-58 228.0 165 62.4
Aa31LG10G4120 Aethionema arabicum HOM05D002857 ORTHO05D008347 4.4e-55 218.4 169 58.6
HPP92_003268 Vanilla planifolia HOM05D002857 ORTHO05D008347 5.7e-55 218.0 164 61.6
Ah.01g006980 Amaranthus hybridus HOM05D002857 ORTHO05D008347 3.7e-54 215.3 137 72.3
Os10g0350800 Oryza sativa ssp. japonica HOM05D002857 ORTHO05D008347 6.4e-54 214.5 176 58.0
THA.LOC104803442 Tarenaya hassleriana HOM05D002857 ORTHO05D008347 3.2e-53 212.2 169 62.1
Zm00001eb019030 Zea mays HOM05D002857 ORTHO05D008347 3.2e-53 212.2 170 59.4
BcaC08g43176 Brassica carinata HOM05D002857 ORTHO05D007919 9.2e-53 210.7 167 56.9
A06p03450 Brassica napus HOM05D002857 ORTHO05D008347 9.2e-53 210.7 167 56.9
C06p04760 Brassica napus HOM05D002857 ORTHO05D008347 9.2e-53 210.7 167 56.9
Carub.0001s3918 Capsella rubella HOM05D002857 ORTHO05D008347 1.6e-52 209.9 166 57.8
BcaB07g33450 Brassica carinata HOM05D002857 ORTHO05D007919 2.7e-52 209.1 169 56.2
Thhalv10011799m.g Eutrema salsugineum HOM05D002857 ORTHO05D008347 2.7e-52 209.1 167 56.3
FAN24G3287 Fragaria x ananassa HOM05D001904 ORTHO05D008347 2.7e-52 209.1 169 61.5
BolC6t35606H Brassica oleracea HOM05D002857 ORTHO05D008347 1.0e-51 207.2 164 57.3
BraA06t23553Z Brassica rapa HOM05D002857 ORTHO05D008347 1.0e-51 207.2 164 57.3
AL1G57550 Arabidopsis lyrata HOM05D002857 ORTHO05D008347 8.6e-51 204.1 166 56.0
SpUn0137_0020 Schrenkiella parvula HOM05D002857 ORTHO05D008347 3.3e-50 202.2 167 54.5
Ciclev10007042m.g Citrus clementina HOM05D002857 ORTHO05D008347 4.9e-46 188.3 144 60.4
SMO361G0227 Selaginella moellendorffii HOM05D002857 ORTHO05D008347 1.6e-44 183.3 165 52.1
ECA234G2213 Erigeron canadensis HOM05D002857 ORTHO05D008347 1.7e-43 179.9 126 66.7
Oeu010448.1 Olea europaea HOM05D002857 ORTHO05D008347 1.8e-40 169.9 121 66.1
AagrBONN_evm.TU.Sc2ySwM_228.4585 Anthoceros agrestis HOM05D002857 ORTHO05D008347 3.1e-40 169.1 154 53.2
Pp3c5_10320 Physcomitrium patens HOM05D002857 ORTHO05D008347 2.0e-39 166.4 163 49.1
arahy.Tifrunner.gnm1.ann1.9CW0PF Arachis hypogaea HOM05D002857 ORTHO05D008347 4.9e-38 161.8 115 67.0
arahy.Tifrunner.gnm1.ann1.AK2UKD Arachis hypogaea HOM05D002857 ORTHO05D008347 1.1e-37 160.6 112 68.8
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 9.2e-37 157.5 113 65.5
Glyma.05G021200 Glycine max HOM05D002857 ORTHO05D008347 2.7e-36 156.0 109 67.0
arahy.Tifrunner.gnm1.ann1.JJ1SBB Arachis hypogaea HOM05D002857 ORTHO05D008347 6.0e-36 154.8 111 65.8
CBR_g3894 Chara braunii HOM05D002857 ORTHO05D008347 4.3e-34 148.7 127 55.1
Mapoly0121s0028 Marchantia polymorpha HOM05D002857 ORTHO05D008347 4.3e-34 148.7 161 44.1
Ciclev10006219m.g Citrus clementina HOM05D002857 ORTHO05D008347 1.8e-32 143.3 123 56.9
Rhsim11G0151300 Rhododendron simsii HOM05D002133 ORTHO05D002256 7.6e-31 137.9 92 69.6
SEGI_03434 Sequoiadendron giganteum HOM05D002857 ORTHO05D008347 7.3e-26 121.3 116 51.7
Cre05.g247150 Chlamydomonas reinhardtii HOM05D002857 ORTHO05D008347 9.0e-24 114.4 196 30.6
MCO12G139 Micromonas commoda HOM05D002857 ORTHO05D008347 4.4e-23 112.1 162 38.9
PRCOL_00006372 Prasinoderma coloniale HOM05D002857 ORTHO05D008347 1.7e-19 100.1 164 38.4
AUR62030843 Chenopodium quinoa HOM05D002857 ORTHO05D008347 2.6e-15 86.3 54 72.2
Sc18g0007410 Simmondsia chinensis HOM05D002857 ORTHO05D008347 2.6e-15 86.3 54 66.7
Sc18g0007450 Simmondsia chinensis HOM05D002857 ORTHO05D008347 2.6e-15 86.3 54 66.7
QL11p030572 Quercus lobata HOM05D002857 ORTHO05D008347 1.9e-13 80.1 51 68.6
Cfa021534 Carpinus fangiana HOM05D002857 ORTHO05D008347 6.0e-12 75.1 55 63.6
CARHR040040 Cardamine hirsuta HOM05D002857 ORTHO05D008347 3.0e-11 72.8 71 47.9
Sabra16G0183400 Salix brachista HOM05D002857 ORTHO05D008347 2.9e-06 56.2 43 58.1


User provided reference genes

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