Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 3.5e-109 398.3 201 100.0
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 3.3e-54 215.7 126 91.3
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 3.2e-33 146.0 91 81.3
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 4.1e-33 145.6 108 68.5
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 1.2e-32 144.1 88 83.0
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 2.7e-32 142.9 100 75.0
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 2.7e-32 142.9 89 79.8
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 3.5e-32 142.5 96 76.0
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 4.6e-32 142.1 92 78.3
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 4.6e-32 142.1 90 76.7
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 4.6e-32 142.1 94 77.7
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 4.6e-32 142.1 113 69.0
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 4.6e-32 142.1 114 65.8
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 6.0e-32 141.7 95 74.7
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 6.0e-32 141.7 88 81.8
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 6.0e-32 141.7 91 73.6
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 7.8e-32 141.4 88 80.7
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 7.8e-32 141.4 88 81.8
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 7.8e-32 141.4 95 73.7
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 1.0e-31 141.0 95 73.7
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 1.0e-31 141.0 122 63.9
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 1.0e-31 141.0 127 62.2
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 1.0e-31 141.0 120 65.0
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 1.0e-31 141.0 87 79.3
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 1.3e-31 140.6 91 74.7
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 1.7e-31 140.2 88 79.5
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 2.3e-31 139.8 95 72.6
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 2.3e-31 139.8 87 77.0
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 2.3e-31 139.8 88 78.4
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 2.3e-31 139.8 88 79.5
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 2.3e-31 139.8 92 73.9
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 2.3e-31 139.8 94 76.6
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 2.3e-31 139.8 93 76.3
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 2.3e-31 139.8 90 76.7
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 2.3e-31 139.8 88 80.7
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 3.0e-31 139.4 88 78.4
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 3.0e-31 139.4 125 62.4
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 3.0e-31 139.4 95 72.6
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 3.9e-31 139.0 91 75.8
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 5.1e-31 138.7 116 65.5
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 5.1e-31 138.7 98 70.4
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 5.1e-31 138.7 99 72.7
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 5.1e-31 138.7 84 81.0
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 5.1e-31 138.7 93 75.3
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 5.1e-31 138.7 93 75.3
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 5.1e-31 138.7 85 80.0
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 6.6e-31 138.3 88 77.3
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 6.6e-31 138.3 86 80.2
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 6.6e-31 138.3 86 80.2
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 6.6e-31 138.3 86 80.2
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 6.6e-31 138.3 93 75.3
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 8.6e-31 137.9 113 65.5
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 8.6e-31 137.9 113 65.5
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 1.1e-30 137.5 86 77.9
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 1.5e-30 137.1 88 78.4
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 1.5e-30 137.1 122 60.7
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.5e-30 137.1 125 61.6
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.5e-30 137.1 125 61.6
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 1.5e-30 137.1 114 64.9
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 1.5e-30 137.1 97 71.1
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 1.9e-30 136.7 86 80.2
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 1.9e-30 136.7 131 59.5
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 1.9e-30 136.7 91 74.7
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 2.5e-30 136.3 83 79.5
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 2.5e-30 136.3 118 63.6
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 2.5e-30 136.3 91 72.5
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 2.5e-30 136.3 99 72.7
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 2.5e-30 136.3 92 76.1
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 3.3e-30 136.0 99 71.7
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 3.3e-30 136.0 88 77.3
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 3.3e-30 136.0 134 57.5
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 3.3e-30 136.0 86 77.9
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 3.3e-30 136.0 125 58.4
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 3.3e-30 136.0 86 74.4
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 4.3e-30 135.6 114 66.7
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 4.3e-30 135.6 99 67.7
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 4.3e-30 135.6 88 76.1
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 5.6e-30 135.2 98 73.5
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 5.6e-30 135.2 98 73.5
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 5.6e-30 135.2 102 70.6
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 7.3e-30 134.8 101 69.3
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 7.3e-30 134.8 99 71.7
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 7.3e-30 134.8 107 64.5
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 9.5e-30 134.4 91 75.8
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 9.5e-30 134.4 91 75.8
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 1.2e-29 134.0 98 71.4
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 1.2e-29 134.0 86 74.4
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 1.6e-29 133.7 98 70.4
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 1.6e-29 133.7 100 70.0
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 1.6e-29 133.7 95 75.8
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 2.1e-29 133.3 88 76.1
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 6.2e-29 131.7 86 75.6
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 6.2e-29 131.7 96 71.9
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 8.1e-29 131.3 96 70.8
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 8.1e-29 131.3 90 68.9
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 1.1e-28 131.0 95 67.4
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.4e-28 130.6 91 73.6
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 1.4e-28 130.6 114 62.3
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 1.4e-28 130.6 85 77.6
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 6.8e-28 128.3 100 69.0
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 1.2e-27 127.5 96 69.8
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 4.4e-27 125.6 122 60.7
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 2.1e-24 116.7 99 61.6
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 2.8e-21 106.3 94 59.6
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 1.1e-20 104.4 90 60.0
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 1.1e-20 104.4 76 63.2
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 4.2e-17 92.4 113 46.9
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 2.8e-13 79.7 88 53.4
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 1.1e-12 77.8 71 53.5


User provided reference genes

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