Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2005 Ceratophyllum demersum HOM05D001602 ORTHO05D001470 9.7e-36 152.9 75 100.0
CDE07G0357 Ceratophyllum demersum HOM05D001602 ORTHO05D001470 3.7e-19 97.8 113 54.0
PSO063G2222 Papaver somniferum HOM05D001602 ORTHO05D001470 9.7e-12 73.2 111 42.3
PSO782G0075 Papaver somniferum HOM05D001602 ORTHO05D001470 9.7e-12 73.2 111 42.3
TAR636G0341 Trochodendron aralioides HOM05D000219 ORTHO05D000226 9.7e-12 73.2 113 43.4
Hund22357 Selenicereus undatus HOM05D001602 ORTHO05D001470 2.8e-11 71.6 112 41.1
Aqoxy2G00391 Aquilegia oxysepala HOM05D001602 ORTHO05D001470 3.7e-11 71.2 111 41.4
SalBow2G2154 Salvia bowleyana HOM05D001602 ORTHO05D001470 1.4e-10 69.3 110 40.9
Sc10g0008650 Simmondsia chinensis HOM05D001602 ORTHO05D001470 2.4e-10 68.6 113 38.1
MBI03_g11897_MAGBIO Magnolia biondii HOM05D001602 ORTHO05D001470 4.1e-10 67.8 113 41.6
Migut.G01316 Erythranthe guttata HOM05D001602 ORTHO05D001470 9.1e-10 66.6 110 40.9
Lsat_1_v5_gn_3_109781 Lactuca sativa HOM05D001602 ORTHO05D001470 2.7e-09 65.1 110 39.1
Nn3g18545 Nelumbo nucifera HOM05D001602 ORTHO05D001470 3.5e-09 64.7 102 43.1
Peaxi162Scf00075g01540 Petunia axillaris HOM05D001602 ORTHO05D001470 3.5e-09 64.7 112 39.3
MSTRG.4296 Avicennia marina HOM05D001602 ORTHO05D001470 5.9e-09 63.9 109 40.4
HanXRQChr03g0089261 Helianthus annuus HOM05D001602 ORTHO05D001470 5.9e-09 63.9 110 39.1
EL10Ac4g09667 Beta vulgaris HOM05D001602 ORTHO05D001470 7.7e-09 63.5 116 37.1
Manes.02G226200 Manihot esculenta HOM05D001602 ORTHO05D001470 7.7e-09 63.5 114 38.6
arahy.Tifrunner.gnm1.ann1.PY9KME Arachis hypogaea HOM05D001602 ORTHO05D001470 1.3e-08 62.8 114 39.5
SGA_v2.0_scaffold17G08162 Striga asiatica HOM05D001602 ORTHO05D001470 2.2e-08 62.0 113 36.3
ATR0124G013 Amborella trichopoda HOM05D001602 ORTHO05D001470 2.9e-08 61.6 112 34.8
arahy.Tifrunner.gnm1.ann1.IXI1D4 Arachis hypogaea HOM05D001602 ORTHO05D001470 2.9e-08 61.6 114 38.6
arahy.Tifrunner.gnm1.ann1.W1MG13 Arachis hypogaea HOM05D001602 ORTHO05D001470 2.9e-08 61.6 114 38.6
CAN.G466.9 Capsicum annuum HOM05D001602 ORTHO05D001470 3.8e-08 61.2 112 38.4
Ah.02g126730 Amaranthus hybridus HOM05D001602 ORTHO05D001470 5.0e-08 60.8 113 35.4
Lj2g0019069 Lotus japonicus HOM05D001602 ORTHO05D001470 8.5e-08 60.1 115 37.4
Mapoly0115s0038 Marchantia polymorpha HOM05D001602 ORTHO05D001470 1.1e-07 59.7 114 32.5
Nitab4.5_0000242g0140 Nicotiana tabacum HOM05D001602 ORTHO05D001470 1.5e-07 59.3 112 36.6
QL10p033772 Quercus lobata HOM05D001602 ORTHO05D001470 1.5e-07 59.3 114 36.8
Phvul.004G136600 Phaseolus vulgaris HOM05D001602 ORTHO05D001470 1.9e-07 58.9 115 36.5
TPR.G31348 Trifolium pratense HOM05D001602 ORTHO05D001470 2.5e-07 58.5 115 37.4
Ca_25281_v3 Cicer arietinum L. HOM05D001602 ORTHO05D001470 3.2e-07 58.2 115 36.5
Sabra17G0126100 Salix brachista HOM05D001602 ORTHO05D001470 3.2e-07 58.2 115 33.9
Glyma.16G128200 Glycine max HOM05D001602 ORTHO05D001470 4.2e-07 57.8 115 35.7
Potri.017G153900 Populus trichocarpa HOM05D001602 ORTHO05D001470 4.2e-07 57.8 115 35.7
Glyma.03G073748 Glycine max HOM05D001602 ORTHO05D001470 7.2e-07 57.0 115 35.7
Gohir.A12G088350 Gossypium hirsutum HOM05D001602 ORTHO05D001470 7.2e-07 57.0 123 35.8
Gohir.D12G086700 Gossypium hirsutum HOM05D001602 ORTHO05D001470 7.2e-07 57.0 118 33.9
Gorai.008G096900 Gossypium raimondii HOM05D001602 ORTHO05D001470 7.2e-07 57.0 118 33.9
Medtr6g068940 Medicago truncatula HOM05D001602 ORTHO05D001470 7.2e-07 57.0 115 35.7
Solyc08g014040.3 Solanum lycopersicum HOM05D001602 ORTHO05D001470 7.2e-07 57.0 112 36.6
Sopen08g004920 Solanum pennellii HOM05D001602 ORTHO05D001470 7.2e-07 57.0 112 36.6
Haze_18406 Corylus avellana HOM05D000219 ORTHO05D000226 9.4e-07 56.6 119 35.3
Hma1.2p1_0816F.1_g223000 Hydrangea macrophylla HOM05D001602 ORTHO05D001470 9.4e-07 56.6 113 36.3
PGSC0003DMG400014616 Solanum tuberosum HOM05D001602 ORTHO05D001470 9.4e-07 56.6 112 35.7
Atru.chr2.263 Acer truncatum HOM05D001602 ORTHO05D001470 1.6e-06 55.8 123 33.3
Dinv11736 Davidia involucrata HOM05D001602 ORTHO05D001470 1.6e-06 55.8 112 34.8
AagrBONN_evm.TU.Sc2ySwM_362.258 Anthoceros agrestis HOM05D001602 ORTHO05D001470 3.6e-06 54.7 109 32.1
Prupe.5G245300 Prunus persica HOM05D001602 ORTHO05D001470 3.6e-06 54.7 129 34.1
GSVIVG01024244001 Vitis vinifera HOM05D001602 ORTHO05D001470 3.6e-06 54.7 116 33.6
CiPaw.15G107800 Carya illinoinensis HOM05D001602 ORTHO05D001470 4.7e-06 54.3 117 34.2
Psat1g018240 Pisum sativum HOM05D001602 ORTHO05D001470 4.7e-06 54.3 115 34.8
TWI81G0762 Tripterygium wilfordii HOM05D001602 ORTHO05D001470 4.7e-06 54.3 114 35.1
Duzib248G1501 Durio zibethinus HOM05D001602 ORTHO05D001470 6.1e-06 53.9 115 33.9


User provided reference genes

Program Settings