Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1970 Ceratophyllum demersum HOM05D006576 ORTHO05D008644 0.0e+00 1152.9 577 100.0
TAR381G1568 Trochodendron aralioides HOM05D006576 ORTHO05D008644 2.8e-268 928.3 575 74.4
COL.COLO4_26345 Corchorus olitorius HOM05D006576 ORTHO05D008644 4.2e-264 914.4 575 76.5
Nn1g05071 Nelumbo nucifera HOM05D006576 ORTHO05D008644 1.4e-262 909.4 575 73.7
CSS0022363 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 5.7e-261 904.0 575 73.2
Lalb_Chr11g0062371 Lupinus albus HOM05D006576 ORTHO05D008644 7.0e-259 897.1 575 71.1
Glyma.06G033200 Glycine max HOM05D006576 ORTHO05D008644 3.5e-258 894.8 575 70.6
Aqoxy6G01046 Aquilegia oxysepala HOM05D006576 ORTHO05D008644 4.5e-258 894.4 575 71.7
Glyma.04G033200 Glycine max HOM05D006576 ORTHO05D008644 1.0e-257 893.3 575 70.1
Gohir.D01G105100 Gossypium hirsutum HOM05D006576 ORTHO05D008644 1.7e-257 892.5 575 70.8
Gorai.002G129100 Gossypium raimondii HOM05D006576 ORTHO05D008644 1.7e-257 892.5 575 70.8
Lj1g0002309 Lotus japonicus HOM05D006576 ORTHO05D008644 1.1e-256 889.8 575 69.2
Hma1.2p1_0203F.1_g086540 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 1.5e-256 889.4 575 71.0
Gohir.A01G116700 Gossypium hirsutum HOM05D006576 ORTHO05D008644 1.9e-256 889.0 575 70.4
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 4.2e-256 887.9 575 70.4
Ciclev10003149m.g Citrus clementina HOM05D006576 ORTHO05D008644 9.4e-256 886.7 575 71.1
Thecc.08G024000 Theobroma cacao HOM05D006576 ORTHO05D008644 1.2e-255 886.3 568 71.1
Ca_15522_v3 Cicer arietinum L. HOM05D006576 ORTHO05D008644 2.7e-255 885.2 567 71.6
RcHm_v2.0_Chr6g0300731 Rosa chinensis HOM05D006576 ORTHO05D008644 4.7e-255 884.4 575 70.6
Prupe.1G381700 Prunus persica HOM05D006576 ORTHO05D008644 6.1e-255 884.0 575 74.1
Medtr3g111730 Medicago truncatula HOM05D006576 ORTHO05D008644 8.0e-255 883.6 575 70.8
Sabra14G0140900 Salix brachista HOM05D006576 ORTHO05D008644 2.3e-254 882.1 575 70.3
Phvul.009G056900 Phaseolus vulgaris HOM05D006576 ORTHO05D008644 5.2e-254 880.9 575 69.9
ClCG05G019150 Citrullus lanatus HOM05D006576 ORTHO05D008644 6.8e-254 880.6 570 70.7
Manes.11G048300 Manihot esculenta HOM05D006576 ORTHO05D008644 8.8e-254 880.2 576 70.7
arahy.Tifrunner.gnm1.ann1.G51JN1 Arachis hypogaea HOM05D006576 ORTHO05D008644 3.4e-253 878.2 574 69.2
TWI36G0276 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 3.4e-253 878.2 575 69.0
arahy.Tifrunner.gnm1.ann1.N2LUF1 Arachis hypogaea HOM05D006576 ORTHO05D008644 5.7e-253 877.5 574 69.3
CsaV3_3G044990 Cucumis sativus L. HOM05D006576 ORTHO05D008644 5.7e-253 877.5 575 69.7
MELO3C003867.2 Cucumis melo HOM05D006576 ORTHO05D008644 1.3e-252 876.3 575 69.7
Psat0s4808g0040 Pisum sativum HOM05D006576 ORTHO05D008644 2.8e-252 875.2 595 67.6
FvH4_2g40020 Fragaria vesca HOM05D006576 ORTHO05D008644 6.3e-252 874.0 575 69.7
Cc10_g03100 Coffea canephora HOM05D006576 ORTHO05D008644 1.1e-251 873.2 575 68.7
CAN.G1126.39 Capsicum annuum HOM05D006576 ORTHO05D008644 1.4e-251 872.8 575 68.3
Sed0024937 Sechium edule HOM05D006576 ORTHO05D008644 3.1e-251 871.7 575 69.6
FAN27G3021 Fragaria x ananassa HOM05D006576 ORTHO05D008644 9.1e-251 870.2 575 69.9
Lj4A42T76 Lonicera japonica HOM05D006576 ORTHO05D008644 1.6e-250 869.4 590 68.5
Peaxi162Scf00690g00125 Petunia axillaris HOM05D006576 ORTHO05D008644 1.6e-250 869.4 575 68.7
Cpa.g.sc64.67 Carica papaya HOM05D006576 ORTHO05D008644 2.0e-250 869.0 575 69.7
Solyc04g080140.4 Solanum lycopersicum HOM05D006576 ORTHO05D008644 2.7e-250 868.6 575 68.9
QL02p007885 Quercus lobata HOM05D006576 ORTHO05D008644 4.5e-250 867.8 620 66.3
HanXRQChr04g0105541 Helianthus annuus HOM05D006576 ORTHO05D008644 7.7e-250 867.1 575 68.3
Sopen04g033720 Solanum pennellii HOM05D006576 ORTHO05D008644 7.7e-250 867.1 575 68.7
Potri.014G180700 Populus trichocarpa HOM05D006576 ORTHO05D008644 1.0e-249 866.7 575 69.2
PGR083G0445 Punica granatum HOM05D006576 ORTHO05D008644 1.3e-249 866.3 574 69.0
Nitab4.5_0012039g0010 Nicotiana tabacum HOM05D006576 ORTHO05D008644 1.7e-249 865.9 582 68.4
Atru.chr13.516 Acer truncatum HOM05D006576 ORTHO05D008644 2.3e-249 865.5 574 70.2
MD15G1029800 Malus domestica HOM05D006576 ORTHO05D008644 2.3e-249 865.5 575 67.8
MSTRG.25158 Avicennia marina HOM05D006576 ORTHO05D008644 3.8e-249 864.8 575 68.5
Migut.C00705 Erythranthe guttata HOM05D006576 ORTHO05D008644 1.1e-248 863.2 575 67.8
CiPaw.16G055000 Carya illinoinensis HOM05D006576 ORTHO05D008644 1.5e-248 862.8 575 68.9
Rhsim06G0035200 Rhododendron simsii HOM05D006576 ORTHO05D008644 2.5e-248 862.1 610 66.4
SalBow7G4023 Salvia bowleyana HOM05D006576 ORTHO05D008644 3.2e-248 861.7 595 66.9
ATR0733G192 Amborella trichopoda HOM05D006576 ORTHO05D008644 1.8e-246 855.9 575 68.3
DCAR_019521 Daucus carota HOM05D006576 ORTHO05D008644 2.3e-246 855.5 576 68.6
Atru.BG.235.p Acer truncatum HOM05D006576 ORTHO05D008644 5.2e-246 854.4 572 70.1
CANSAT25G2025 Cannabis sativa HOM05D006576 ORTHO05D008644 6.8e-246 854.0 575 68.9
Hund26593 Selenicereus undatus HOM05D006576 ORTHO05D008644 6.8e-246 854.0 567 69.0
Eucgr.F01554 Eucalyptus grandis HOM05D006576 ORTHO05D008644 1.2e-245 853.2 579 70.6
TWI12G0537 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 1.2e-245 853.2 575 67.1
Haze_17991 Corylus avellana HOM05D006576 ORTHO05D008644 1.7e-244 849.4 637 63.7
MD08G1033200 Malus domestica HOM05D006576 ORTHO05D008644 1.1e-243 846.7 575 66.8
GSVIVG01009681001 Vitis vinifera HOM05D006576 ORTHO05D008644 1.8e-243 845.9 575 69.4
Nitab4.5_0000110g0470 Nicotiana tabacum HOM05D006576 ORTHO05D008644 1.6e-242 842.8 577 67.8
PSO675G1390 Papaver somniferum HOM05D006576 ORTHO05D008644 2.0e-242 842.4 575 68.7
SGA_v2.0_scaffold24G10239 Striga asiatica HOM05D006576 ORTHO05D008644 4.5e-242 841.3 573 67.5
EL10Ac1g01831 Beta vulgaris HOM05D006576 ORTHO05D008644 7.8e-242 840.5 575 66.6
Actinidia15312 Actinidia chinensis HOM05D006576 ORTHO05D008644 1.3e-241 839.7 540 71.9
THA.LOC104822840 Tarenaya hassleriana HOM05D006576 ORTHO05D008644 5.0e-241 837.8 576 66.5
Lsat_1_v5_gn_1_17900 Lactuca sativa HOM05D006576 ORTHO05D008644 3.3e-240 835.1 567 67.4
Zm00001eb107720 Zea mays HOM05D006576 ORTHO05D008644 9.5e-240 833.6 575 66.1
Os07g0581300 Oryza sativa ssp. japonica HOM05D006576 ORTHO05D008644 1.6e-239 832.8 575 65.9
Sp1g33910 Schrenkiella parvula HOM05D006576 ORTHO05D008644 2.8e-239 832.0 575 66.3
AT1G45150 Arabidopsis thaliana HOM05D006576 ORTHO05D008644 1.0e-238 830.1 575 66.1
BcaB04g17577 Brassica carinata HOM05D006576 ORTHO05D008644 1.0e-238 830.1 575 65.4
Ah.05g167470 Amaranthus hybridus HOM05D006576 ORTHO05D008644 2.3e-238 828.9 575 66.3
A08p06220 Brassica napus HOM05D006576 ORTHO05D008644 6.8e-238 827.4 575 65.6
BraA08t32625Z Brassica rapa HOM05D006576 ORTHO05D008644 1.2e-237 826.6 575 65.4
Thhalv10011304m.g Eutrema salsugineum HOM05D006576 ORTHO05D008644 1.2e-237 826.6 575 65.4
Carub.0001s3555 Capsella rubella HOM05D006576 ORTHO05D008644 2.6e-237 825.5 575 65.4
AUR62033848 Chenopodium quinoa HOM05D006576 ORTHO05D008644 4.4e-237 824.7 575 66.3
FAN20G0603 Fragaria x ananassa HOM05D006576 ORTHO05D008644 1.3e-236 823.2 575 67.3
CSS0029857 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 4.1e-235 818.1 523 72.8
ECA247G3618 Erigeron canadensis HOM05D006576 ORTHO05D008644 5.9e-234 814.3 549 68.1
BcaC07g37274 Brassica carinata HOM05D006576 ORTHO05D008644 1.7e-233 812.8 575 64.9
C08p07030 Brassica napus HOM05D006576 ORTHO05D008644 1.7e-233 812.8 575 64.9
BolC8t47545H Brassica oleracea HOM05D006576 ORTHO05D008644 1.7e-233 812.8 575 64.9
PSO541G0394 Papaver somniferum HOM05D006576 ORTHO05D008644 5.0e-233 811.2 575 67.1
vmacro21626 Vaccinium macrocarpon HOM05D006576 ORTHO05D008644 1.2e-231 806.6 726 55.5
AL1G52790 Arabidopsis lyrata HOM05D006576 ORTHO05D008644 4.7e-231 804.7 559 65.5
Duzib093G2111 Durio zibethinus HOM05D006576 ORTHO05D008644 3.4e-229 798.5 575 67.7
Mapoly0015s0075 Marchantia polymorpha HOM05D006576 ORTHO05D008644 3.6e-215 751.9 576 61.3
Sc02g0006340 Simmondsia chinensis HOM05D006576 ORTHO05D008644 1.6e-210 736.5 483 69.4
SMO367G0262 Selaginella moellendorffii HOM05D006576 ORTHO05D008644 1.1e-208 730.3 577 60.0
Pp3c21_15170 Physcomitrium patens HOM05D006576 ORTHO05D008644 1.6e-207 726.5 576 59.2
FAN15G1632 Fragaria x ananassa HOM05D006576 ORTHO05D008644 1.3e-199 700.3 569 60.5
CARHR036240 Cardamine hirsuta HOM05D006576 ORTHO05D008644 1.4e-169 600.5 364 72.0
Hma1.2p1_0203F.1_g086550 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 8.8e-161 571.2 450 61.3
unitig_578.g16727 Utricularia gibba HOM05D006576 ORTHO05D008644 6.8e-129 465.3 429 53.6
CBR_g55233 Chara braunii HOM05D006576 ORTHO05D008644 3.1e-126 456.4 544 46.3
AUR62041679 Chenopodium quinoa HOM05D006576 ORTHO05D008644 4.1e-126 456.1 336 64.0
Dinv36060 Davidia involucrata HOM05D006576 ORTHO05D008644 2.0e-125 453.8 298 71.1
Oeu005363.1 Olea europaea HOM05D006576 ORTHO05D008644 3.7e-119 433.0 310 65.2
AUR62041680 Chenopodium quinoa HOM05D006576 ORTHO05D008644 1.7e-100 370.9 240 68.3
CBR_g6514 Chara braunii HOM05D006576 ORTHO05D008644 5.6e-83 312.8 698 33.5
SEGI_38008 Sequoiadendron giganteum HOM05D006576 ORTHO05D008644 1.5e-59 235.0 151 68.9
SHI46795 Sapria himalayana HOM05D006576 ORTHO05D008644 5.3e-57 226.5 244 49.2
Lsat_1_v5_gn_3_960 Lactuca sativa HOM05D006576 ORTHO05D008644 9.7e-43 179.1 198 44.4
MBI18_g06878_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 2.2e-26 124.8 70 75.7
MBI18_g09633_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 1.2e-24 119.0 71 71.8
MBI13_g29621_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 1.1e-22 112.5 70 70.0
Atru.chr11.1906 Acer truncatum HOM05D006576 ORTHO05D008644 1.4e-20 105.5 65 67.7
MD05G1053300 Malus domestica HOM05D006576 ORTHO05D248938 1.2e-16 92.4 64 60.9
MBI18_g23781_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 4.2e-14 84.0 44 81.8
Nn7g38200 Nelumbo nucifera HOM05D006576 ORTHO05D008644 4.7e-13 80.5 72 54.2
Nn2g14734 Nelumbo nucifera HOM05D006576 ORTHO05D008644 8.0e-13 79.7 73 52.1
Zm00001eb326440 Zea mays HOM05D006576 ORTHO05D028753 2.0e-11 75.1 54 70.4
Zm00001eb361570 Zea mays HOM05D006576 ORTHO05D028753 2.0e-11 75.1 54 70.4
Zm00001eb377960 Zea mays HOM05D006576 ORTHO05D028753 2.0e-11 75.1 54 70.4
Zm00001eb171910 Zea mays HOM05D000538 ORTHO05D003297 4.9e-10 70.5 103 37.9
AL4G26800 Arabidopsis lyrata HOM05D006576 ORTHO05D008644 8.6e-07 59.7 99 38.4


User provided reference genes

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