Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1955 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 1.3e-202 709.5 355 100.0
CDE03G0182 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 3.8e-183 644.8 382 86.6
TAR636G1466 Trochodendron aralioides HOM05D004208 ORTHO05D005156 5.2e-148 528.1 390 68.5
Lj2A1151T32 Lonicera japonica HOM05D004208 ORTHO05D005156 4.7e-141 505.0 395 66.3
Dinv22405 Davidia involucrata HOM05D004208 ORTHO05D005156 3.4e-139 498.8 393 65.1
Gohir.A08G190100 Gossypium hirsutum HOM05D004208 ORTHO05D005156 2.4e-137 492.7 389 64.0
Duzib138G0474 Durio zibethinus HOM05D004208 ORTHO05D005156 5.4e-137 491.5 390 63.3
Thecc.01G258100 Theobroma cacao HOM05D004208 ORTHO05D005156 5.4e-137 491.5 390 63.8
GSVIVG01028335001 Vitis vinifera HOM05D004208 ORTHO05D005156 7.1e-137 491.1 389 64.3
Hma1.2p1_0273F.1_g109690 Hydrangea macrophylla HOM05D004208 ORTHO05D005156 1.6e-136 490.0 390 64.6
Gorai.004G221000 Gossypium raimondii HOM05D004208 ORTHO05D005156 2.1e-136 489.6 390 63.8
Gohir.D08G208600 Gossypium hirsutum HOM05D004208 ORTHO05D005156 2.7e-136 489.2 390 63.8
CSS0041954 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 2.3e-135 486.1 393 64.4
CSS0038412 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 8.7e-135 484.2 393 64.4
Actinidia25791 Actinidia chinensis HOM05D004208 ORTHO05D005156 1.3e-133 480.3 410 60.7
COL.COLO4_05893 Corchorus olitorius HOM05D004208 ORTHO05D005156 1.6e-133 479.9 399 61.9
PSO339G3828 Papaver somniferum HOM05D004208 ORTHO05D005156 1.6e-133 479.9 391 62.9
Cfa012194 Carpinus fangiana HOM05D004208 ORTHO05D005156 4.0e-132 475.3 389 63.5
Duzib133G1203 Durio zibethinus HOM05D004208 ORTHO05D005156 5.3e-132 474.9 390 61.5
Actinidia07297 Actinidia chinensis HOM05D004208 ORTHO05D005156 6.9e-132 474.6 393 62.6
Nn3g19657 Nelumbo nucifera HOM05D004208 ORTHO05D005156 2.0e-131 473.0 358 66.2
Eucgr.G01944 Eucalyptus grandis HOM05D004208 ORTHO05D005156 2.6e-131 472.6 389 60.4
CiPaw.11G131900 Carya illinoinensis HOM05D004208 ORTHO05D005156 7.6e-131 471.1 389 63.2
PGR031G1029 Punica granatum HOM05D004208 ORTHO05D005156 1.7e-130 469.9 394 60.2
QL12p032241 Quercus lobata HOM05D004208 ORTHO05D005156 3.8e-130 468.8 388 62.6
Manes.12G032400 Manihot esculenta HOM05D004208 ORTHO05D005156 1.9e-129 466.5 390 61.0
Migut.O00608 Erythranthe guttata HOM05D004208 ORTHO05D005156 5.4e-129 464.9 396 60.6
CANSAT01G2107 Cannabis sativa HOM05D004208 ORTHO05D005156 4.6e-128 461.8 396 59.1
Haze_08822 Corylus avellana HOM05D004208 ORTHO05D005156 1.1e-126 457.2 418 59.1
Migut.N01348 Erythranthe guttata HOM05D004208 ORTHO05D005156 1.1e-126 457.2 396 60.1
Peaxi162Scf00225g00519 Petunia axillaris HOM05D004208 ORTHO05D005156 1.1e-126 457.2 397 58.2
SGA_v2.0_scaffold58G20323 Striga asiatica HOM05D004208 ORTHO05D005156 4.3e-126 455.3 396 59.1
Atru.chr5.1689 Acer truncatum HOM05D004208 ORTHO05D005156 2.1e-125 453.0 384 60.9
Sopen01g041810 Solanum pennellii HOM05D004208 ORTHO05D005156 4.0e-124 448.7 398 57.8
TWI32G0756 Tripterygium wilfordii HOM05D004208 ORTHO05D005156 4.0e-124 448.7 390 59.0
Ciclev10019992m.g Citrus clementina HOM05D004208 ORTHO05D005156 9.0e-124 447.6 380 60.5
MBI10_g22594_MAGBIO Magnolia biondii HOM05D004208 ORTHO05D005156 2.6e-123 446.0 393 59.0
CsaV3_5G028820 Cucumis sativus L. HOM05D004208 ORTHO05D005156 3.4e-123 445.7 391 58.6
Solyc01g098230.3 Solanum lycopersicum HOM05D004208 ORTHO05D005156 4.5e-123 445.3 398 57.3
SalBow1G3185 Salvia bowleyana HOM05D004208 ORTHO05D005156 1.3e-122 443.7 394 58.1
Sed0003224 Sechium edule HOM05D004208 ORTHO05D005156 6.4e-122 441.4 390 58.2
Aa31LG8G17460 Aethionema arabicum HOM05D004208 ORTHO05D005156 8.4e-122 441.0 387 58.1
Potri.002G038300 Populus trichocarpa HOM05D004208 ORTHO05D005156 1.1e-121 440.7 389 56.6
CAN.G134.214 Capsicum annuum HOM05D004208 ORTHO05D005156 2.5e-121 439.5 393 57.3
SGA_v2.0_scaffold32G13335 Striga asiatica HOM05D004208 ORTHO05D005156 2.1e-120 436.4 386 58.8
Actinidia09547 Actinidia chinensis HOM05D004208 ORTHO05D005156 2.7e-120 436.0 357 63.0
Prupe.8G223600 Prunus persica HOM05D004208 ORTHO05D005156 4.6e-120 435.3 388 55.9
FAN07G0785 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.0e-119 434.1 390 57.2
Peaxi162Scf00225g00527 Petunia axillaris HOM05D004208 ORTHO05D005156 1.0e-119 434.1 397 56.2
RcHm_v2.0_Chr6g0288111 Rosa chinensis HOM05D004208 ORTHO05D005156 1.3e-119 433.7 390 56.7
Manes.13G034400 Manihot esculenta HOM05D004208 ORTHO05D005156 3.0e-119 432.6 390 55.6
FAN17G2653 Fragaria x ananassa HOM05D004208 ORTHO05D005156 6.7e-119 431.4 390 56.7
ATR0736G190 Amborella trichopoda HOM05D004208 ORTHO05D005156 1.1e-118 430.6 387 57.4
Sabra02G0030700 Salix brachista HOM05D004208 ORTHO05D005156 1.1e-118 430.6 389 55.8
Lsat_1_v5_gn_7_79121 Lactuca sativa HOM05D004208 ORTHO05D005156 1.5e-118 430.3 391 57.8
AUR62030125 Chenopodium quinoa HOM05D004208 ORTHO05D005156 5.6e-118 428.3 388 55.4
HPP92_012187 Vanilla planifolia HOM05D004208 ORTHO05D005156 5.6e-118 428.3 394 56.6
AUR62038602 Chenopodium quinoa HOM05D004208 ORTHO05D005156 1.3e-117 427.2 388 55.7
HanXRQChr16g0512021 Helianthus annuus HOM05D004208 ORTHO05D005156 2.1e-117 426.4 395 57.2
FvH4_4g12040 Fragaria vesca HOM05D004208 ORTHO05D005156 3.7e-117 425.6 390 56.7
Glyma.04G107400 Glycine max HOM05D004208 ORTHO05D005156 3.7e-117 425.6 386 55.7
TAR362G0204 Trochodendron aralioides HOM05D004208 ORTHO05D005156 1.1e-116 424.1 347 64.0
EL10Ac7g17258 Beta vulgaris HOM05D004208 ORTHO05D005156 1.4e-116 423.7 389 55.5
Potri.005G224500 Populus trichocarpa HOM05D004208 ORTHO05D005156 1.4e-116 423.7 390 55.1
Nitab4.5_0000245g0150 Nicotiana tabacum HOM05D004208 ORTHO05D005156 2.0e-115 419.9 387 56.3
THA.LOC104805532 Tarenaya hassleriana HOM05D004208 ORTHO05D005156 2.0e-115 419.9 315 66.3
Phvul.005G002100 Phaseolus vulgaris HOM05D004208 ORTHO05D005156 2.6e-115 419.5 386 54.9
Ah.02g120380 Amaranthus hybridus HOM05D004208 ORTHO05D005156 1.0e-114 417.5 386 54.9
Ah.03g147410 Amaranthus hybridus HOM05D004208 ORTHO05D005156 1.0e-114 417.5 385 56.4
Sed0002598 Sechium edule HOM05D004208 ORTHO05D005156 1.0e-114 417.5 391 55.2
Psat7g228960 Pisum sativum HOM05D004208 ORTHO05D005156 2.9e-114 416.0 386 54.1
Sabra05G0173200 Salix brachista HOM05D004208 ORTHO05D005156 6.5e-114 414.8 401 53.9
Cc01_g18340 Coffea canephora HOM05D004208 ORTHO05D005156 8.4e-114 414.5 397 53.4
VMungo1080G0701 Vigna mungo HOM05D004208 ORTHO05D005156 1.1e-113 414.1 386 54.7
FvH4_2g21470 Fragaria vesca HOM05D004208 ORTHO05D005156 1.9e-113 413.3 390 54.4
MSTRG.16949 Avicennia marina HOM05D004208 ORTHO05D005156 3.2e-113 412.5 388 55.9
RcHm_v2.0_Chr4g0409381 Rosa chinensis HOM05D004208 ORTHO05D005156 7.1e-113 411.4 393 54.7
AT2G36070 Arabidopsis thaliana HOM05D004208 ORTHO05D005156 1.2e-112 410.6 383 54.8
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.7e-112 409.5 385 54.5
DCAR_005689 Daucus carota HOM05D004208 ORTHO05D005156 3.5e-112 409.1 405 53.3
Thhalv10001977m.g Eutrema salsugineum HOM05D004208 ORTHO05D005156 1.3e-111 407.1 388 54.6
AL4G32160 Arabidopsis lyrata HOM05D004208 ORTHO05D005156 1.8e-111 406.8 383 53.8
AL3G53520 Arabidopsis lyrata HOM05D004208 ORTHO05D005156 3.0e-111 406.0 383 54.3
Lalb_Chr15g0090311 Lupinus albus HOM05D004208 ORTHO05D005156 5.1e-111 405.2 376 54.8
FAN15G2877 Fragaria x ananassa HOM05D004208 ORTHO05D005156 8.7e-111 404.4 413 52.3
Medtr2g083690 Medicago truncatula HOM05D004208 ORTHO05D005156 4.3e-110 402.1 390 53.8
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 5.7e-110 401.7 376 55.1
Ca_26001_v3 Cicer arietinum L. HOM05D004208 ORTHO05D005156 4.8e-109 398.7 397 52.4
Rhsim01G0263600 Rhododendron simsii HOM05D004208 ORTHO05D005156 1.8e-108 396.7 391 53.2
Oeu062471.2 Olea europaea HOM05D004208 ORTHO05D005156 3.1e-108 396.0 445 50.6
Zm00001eb111900 Zea mays HOM05D004208 ORTHO05D005156 3.1e-108 396.0 386 53.4
arahy.Tifrunner.gnm1.ann1.W57KUE Arachis hypogaea HOM05D004208 ORTHO05D005156 5.3e-108 395.2 419 50.6
CSS0015888 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 5.3e-108 395.2 394 55.6
MD05G1197100 Malus domestica HOM05D004208 ORTHO05D005156 9.0e-108 394.4 394 53.0
MELO3C033986.2 Cucumis melo HOM05D004208 ORTHO05D005156 1.5e-107 393.7 482 46.3
AT2G20510 Arabidopsis thaliana HOM05D004208 ORTHO05D005156 5.9e-107 391.7 386 52.6
TWI34G1830 Tripterygium wilfordii HOM05D004208 ORTHO05D005156 5.9e-107 391.7 334 58.4
Aqoxy2G03649 Aquilegia oxysepala HOM05D004208 ORTHO05D005156 1.0e-106 391.0 383 53.3
Dinv34629 Davidia involucrata HOM05D004208 ORTHO05D005156 8.5e-106 387.9 337 61.7
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 7.2e-105 384.8 365 54.0
Carub.0004s1781 Capsella rubella HOM05D004208 ORTHO05D005156 1.2e-104 384.0 383 52.0
arahy.Tifrunner.gnm1.ann1.M6MGA2 Arachis hypogaea HOM05D004208 ORTHO05D005156 3.6e-104 382.5 362 54.4
C09p15320 Brassica napus HOM05D004208 ORTHO05D005156 6.1e-104 381.7 384 52.9
BraA09t36939Z Brassica rapa HOM05D004208 ORTHO05D005156 1.0e-103 380.9 384 52.3
FAN12G3775 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.8e-103 380.2 381 54.9
FAN12G0345 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.3e-103 379.8 381 54.9
A09p12940 Brassica napus HOM05D004208 ORTHO05D005156 1.5e-102 377.1 384 52.1
BcaC06g36740 Brassica carinata HOM05D004208 ORTHO05D005156 2.0e-102 376.7 384 51.0
BolC7t40497H Brassica oleracea HOM05D004208 ORTHO05D005156 2.0e-102 376.7 384 51.0
Cpa.g.sc81.94 Carica papaya HOM05D004208 ORTHO05D005156 2.5e-102 376.3 391 51.9
BraA07t27815Z Brassica rapa HOM05D004208 ORTHO05D005156 5.7e-102 375.2 385 51.2
BcaB07g31584 Brassica carinata HOM05D004208 ORTHO05D005156 7.4e-102 374.8 376 50.3
A07p00220 Brassica napus HOM05D004208 ORTHO05D005156 1.3e-101 374.0 385 50.9
ECA236G3853 Erigeron canadensis HOM05D004208 ORTHO05D000364 1.3e-101 374.0 395 50.4
Sp3g33730 Schrenkiella parvula HOM05D004208 ORTHO05D005156 1.7e-101 373.6 387 51.2
TPR.G5025 Trifolium pratense HOM05D004208 ORTHO05D005156 1.7e-101 373.6 364 51.4
Eucgr.B01552 Eucalyptus grandis HOM05D004208 ORTHO05D005156 2.2e-101 373.2 387 52.2
BolC9t54440H Brassica oleracea HOM05D004208 ORTHO05D005156 3.7e-101 372.5 384 52.3
BcaC04g22784 Brassica carinata HOM05D004208 ORTHO05D005156 8.2e-101 371.3 384 52.1
Carub.0003s3496 Capsella rubella HOM05D004208 ORTHO05D005156 5.3e-100 368.6 379 51.2
Nitab4.5_0001165g0160 Nicotiana tabacum HOM05D004208 ORTHO05D005156 1.2e-99 367.5 351 53.8
Os07g0409700 Oryza sativa ssp. japonica HOM05D004208 ORTHO05D005156 7.7e-99 364.8 309 58.9
BcaB03g16846 Brassica carinata HOM05D004208 ORTHO05D005156 1.7e-98 363.6 385 50.1
BcaB08g34912 Brassica carinata HOM05D004208 ORTHO05D005156 3.9e-95 352.4 370 49.5
CARHR130310 Cardamine hirsuta HOM05D004208 ORTHO05D005156 3.9e-95 352.4 383 50.1
C07p00510 Brassica napus HOM05D004208 ORTHO05D005156 1.1e-94 350.9 384 49.0
Medtr4g075680 Medicago truncatula HOM05D004208 ORTHO05D005156 9.7e-94 347.8 390 47.9
PGSC0003DMG400022489 Solanum tuberosum HOM05D004208 ORTHO05D005156 6.3e-93 345.1 216 74.5
Lj6g0013651 Lotus japonicus HOM05D004208 ORTHO05D005156 3.5e-91 339.3 279 57.3
Mapoly0070s0010 Marchantia polymorpha HOM05D004208 ORTHO05D005156 2.1e-88 330.1 367 48.0
Medtr4g029490 Medicago truncatula HOM05D004208 ORTHO05D005156 5.2e-87 325.5 362 47.0
ClCG01G005870 Citrullus lanatus HOM05D004208 ORTHO05D005156 1.1e-86 324.3 216 70.4
Peaxi162Scf00118g00111 Petunia axillaris HOM05D004208 ORTHO05D005156 1.1e-86 324.3 359 49.9
Pp3c4_19960 Physcomitrium patens HOM05D004208 ORTHO05D005156 1.3e-82 310.8 344 47.4
Pp3c12_7570 Physcomitrium patens HOM05D004208 ORTHO05D005156 8.5e-82 308.1 344 46.8
unitig_746.g26574 Utricularia gibba HOM05D004208 ORTHO05D005156 3.2e-81 306.2 222 63.1
Nitab4.5_0001526g0060 Nicotiana tabacum HOM05D004208 ORTHO05D005156 4.2e-81 305.8 420 44.3
BcaC07g41210 Brassica carinata HOM05D004208 ORTHO05D005156 3.6e-80 302.8 343 48.4
CBR_g30902 Chara braunii HOM05D004208 ORTHO05D005156 1.5e-78 297.4 391 43.2
AagrBONN_evm.TU.Sc2ySwM_344.3623 Anthoceros agrestis HOM05D004208 ORTHO05D005156 1.3e-77 294.3 311 47.3
SMO353G0191 Selaginella moellendorffii HOM05D004208 ORTHO05D005156 2.8e-77 293.1 380 43.2
Oeu042777.2 Olea europaea HOM05D004208 ORTHO05D005156 2.0e-75 287.0 397 43.1
SEGI_36648 Sequoiadendron giganteum HOM05D004208 ORTHO05D005156 9.4e-73 278.1 310 50.6
Lalb_Chr06g0171061 Lupinus albus HOM05D004208 ORTHO05D005156 1.8e-68 263.8 176 69.3
Nitab4.5_0007798g0030 Nicotiana tabacum HOM05D004208 ORTHO05D005156 3.1e-68 263.1 387 43.9
Oeu021968.1 Olea europaea HOM05D004208 ORTHO05D005156 1.7e-66 257.3 299 50.2
SEGI_05587 Sequoiadendron giganteum HOM05D004208 ORTHO05D005156 2.8e-56 223.4 135 76.3
Sc05g0000700 Simmondsia chinensis HOM05D004208 ORTHO05D005156 2.8e-56 223.4 242 50.4
Actinidia37513 Actinidia chinensis HOM05D004208 ORTHO05D005156 1.4e-55 221.1 156 69.9
MCO02G332 Micromonas commoda HOM05D004208 ORTHO05D005156 3.5e-43 179.9 245 36.7
Cre16.g660800 Chlamydomonas reinhardtii HOM05D004208 ORTHO05D005156 1.9e-36 157.5 242 34.3
HanXRQChr10g0294161 Helianthus annuus HOM05D004208 ORTHO05D005156 7.1e-36 155.6 211 46.9
PRCOL_00004598 Prasinoderma coloniale HOM05D004208 ORTHO05D005156 8.6e-34 148.7 188 38.3
RcHm_v2.0_Chr5g0013581 Rosa chinensis HOM05D004208 ORTHO05D005156 3.1e-31 140.2 94 66.0
Lalb_Chr06g0171071 Lupinus albus HOM05D004208 ORTHO05D005156 3.5e-27 126.7 205 38.0
Glyma.09G002800 Glycine max HOM05D004208 ORTHO05D005156 3.9e-26 123.2 76 71.1
SEGI_40921 Sequoiadendron giganteum HOM05D004208 ORTHO05D005156 2.1e-24 117.5 72 72.2
CAN.G279.25 Capsicum annuum HOM05D004208 ORTHO05D005156 8.7e-18 95.5 236 33.9
Atru.chr3.4028 Acer truncatum HOM05D004208 ORTHO05D005156 4.3e-17 93.2 56 75.0
SHI09778 Sapria himalayana HOM05D004208 ORTHO05D005156 1.5e-14 84.7 169 34.9
Cfa026408 Carpinus fangiana HOM05D004208 ORTHO05D121639 5.8e-14 82.8 230 24.8
QL04p049599 Quercus lobata HOM05D000196 ORTHO05D000279 6.7e-10 69.3 43 74.4
MD09G1008600 Malus domestica HOM05D004208 ORTHO05D005156 4.3e-09 66.6 55 54.5
HanXRQChr10g0299451 Helianthus annuus HOM05D004208 ORTHO05D219928 2.0e-06 57.8 47 51.1


User provided reference genes

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