Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 1.4e-56 222.6 104 100.0
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 1.6e-25 119.4 74 77.0
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 1.6e-25 119.4 72 79.2
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 3.7e-25 118.2 113 58.4
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 4.8e-25 117.9 72 79.2
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 6.2e-25 117.5 83 71.1
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 8.2e-25 117.1 79 74.7
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 8.2e-25 117.1 72 79.2
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 1.1e-24 116.7 72 77.8
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 1.1e-24 116.7 72 77.8
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 1.4e-24 116.3 72 77.8
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 1.8e-24 115.9 72 77.8
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 1.8e-24 115.9 71 78.9
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 2.4e-24 115.5 72 77.8
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 2.4e-24 115.5 97 63.9
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 2.4e-24 115.5 72 77.8
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.4e-24 115.5 72 77.8
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.4e-24 115.5 72 77.8
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.4e-24 115.5 72 77.8
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 3.1e-24 115.2 96 64.6
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 4.1e-24 114.8 72 77.8
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 4.1e-24 114.8 72 77.8
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 5.3e-24 114.4 72 76.4
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 5.3e-24 114.4 72 76.4
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 6.9e-24 114.0 64 81.2
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 6.9e-24 114.0 72 76.4
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 6.9e-24 114.0 72 79.2
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 6.9e-24 114.0 84 69.0
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 9.0e-24 113.6 72 77.8
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 9.0e-24 113.6 72 77.8
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 9.0e-24 113.6 72 77.8
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 9.0e-24 113.6 72 77.8
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 9.0e-24 113.6 72 77.8
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 9.0e-24 113.6 72 77.8
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 9.0e-24 113.6 73 75.3
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 9.0e-24 113.6 77 72.7
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 9.0e-24 113.6 72 76.4
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 1.2e-23 113.2 72 76.4
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 1.2e-23 113.2 72 75.0
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 1.2e-23 113.2 72 76.4
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 1.2e-23 113.2 72 77.8
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 1.2e-23 113.2 72 77.8
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 1.5e-23 112.8 72 75.0
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 2.0e-23 112.5 72 76.4
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 2.6e-23 112.1 72 76.4
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 2.6e-23 112.1 72 76.4
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 2.6e-23 112.1 72 76.4
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 2.6e-23 112.1 63 84.1
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 3.4e-23 111.7 75 72.0
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 3.4e-23 111.7 72 75.0
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 4.5e-23 111.3 72 76.4
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 4.5e-23 111.3 72 76.4
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 4.5e-23 111.3 72 75.0
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 5.8e-23 110.9 71 73.2
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 5.8e-23 110.9 80 70.0
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 5.8e-23 110.9 68 77.9
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 7.6e-23 110.5 72 72.2
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 1.0e-22 110.2 71 76.1
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 1.0e-22 110.2 54 92.6
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 1.0e-22 110.2 72 73.6
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 1.0e-22 110.2 70 77.1
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 1.3e-22 109.8 72 76.4
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 1.3e-22 109.8 71 74.6
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 1.3e-22 109.8 71 74.6
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 1.3e-22 109.8 72 75.0
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 1.3e-22 109.8 72 75.0
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 1.7e-22 109.4 72 75.0
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 1.7e-22 109.4 52 94.2
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 1.7e-22 109.4 72 75.0
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 2.2e-22 109.0 67 76.1
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 2.2e-22 109.0 72 73.6
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 2.9e-22 108.6 54 92.6
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 2.9e-22 108.6 109 54.1
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 2.9e-22 108.6 71 70.4
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 3.8e-22 108.2 73 71.2
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 3.8e-22 108.2 72 72.2
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 8.4e-22 107.1 69 73.9
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 8.4e-22 107.1 62 79.0
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 8.4e-22 107.1 66 77.3
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 1.1e-21 106.7 62 80.6
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 1.4e-21 106.3 75 73.3
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 1.4e-21 106.3 75 73.3
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 1.9e-21 105.9 54 88.9
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 2.5e-21 105.5 72 68.1
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 2.5e-21 105.5 63 77.8
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 2.5e-21 105.5 72 70.8
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 5.5e-21 104.4 73 68.5
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 7.2e-21 104.0 59 81.4
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 9.3e-21 103.6 62 75.8
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 2.7e-20 102.1 48 93.8
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 3.5e-20 101.7 49 93.9
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 3.9e-19 98.2 49 85.7
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 1.1e-18 96.7 70 61.4
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 3.7e-17 91.7 82 54.9
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 1.0e-14 83.6 77 53.2
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 3.6e-12 75.1 51 60.8
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 5.7e-10 67.8 58 58.6
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 1.3e-06 56.6 57 47.4


User provided reference genes

Program Settings