Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1921 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 0.0e+00 1107.4 564 100.0
CDE07G1685 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 8.8e-307 1056.2 564 95.4
Nn5g30473 Nelumbo nucifera HOM05D004210 ORTHO05D005017 1.4e-235 819.7 562 74.6
Dinv04121 Davidia involucrata HOM05D004210 ORTHO05D005017 7.1e-232 807.4 557 73.4
TAR376G0596 Trochodendron aralioides HOM05D004210 ORTHO05D005017 3.3e-229 798.5 551 73.7
CiPaw.14G037100 Carya illinoinensis HOM05D004210 ORTHO05D005017 1.1e-224 783.5 546 73.1
TAR625G1450 Trochodendron aralioides HOM05D004210 ORTHO05D005017 7.9e-223 777.3 554 72.9
Aqoxy1G00569 Aquilegia oxysepala HOM05D004210 ORTHO05D005017 1.8e-222 776.2 563 71.4
Cpa.g.sc138.49 Carica papaya HOM05D004210 ORTHO05D005017 9.6e-221 770.4 559 70.3
Thecc.10G122400 Theobroma cacao HOM05D004210 ORTHO05D005017 9.6e-221 770.4 560 71.2
Haze_03415 Corylus avellana HOM05D004210 ORTHO05D005017 1.6e-220 769.6 546 71.8
Potri.001G305500 Populus trichocarpa HOM05D004210 ORTHO05D005017 2.0e-218 762.7 546 72.2
Actinidia18370 Actinidia chinensis HOM05D004210 ORTHO05D005017 3.4e-218 761.9 540 71.7
PSO541G0139 Papaver somniferum HOM05D004210 ORTHO05D005017 5.8e-218 761.1 552 70.5
HPP92_001742 Vanilla planifolia HOM05D004210 ORTHO05D005017 1.0e-217 760.4 562 69.9
COL.COLO4_16323 Corchorus olitorius HOM05D004210 ORTHO05D005017 8.4e-217 757.3 560 70.4
Duzib114G0085 Durio zibethinus HOM05D004210 ORTHO05D005017 8.4e-217 757.3 560 70.2
Manes.13G078700 Manihot esculenta HOM05D004210 ORTHO05D005017 1.1e-216 756.9 547 71.3
Nitab4.5_0001611g0030 Nicotiana tabacum HOM05D004210 ORTHO05D005017 5.5e-216 754.6 538 71.6
PGR142G1915 Punica granatum HOM05D004210 ORTHO05D005017 7.1e-216 754.2 560 67.9
Potri.019G000900 Populus trichocarpa HOM05D004210 ORTHO05D005017 1.2e-215 753.4 546 69.8
CANSAT56G1750 Cannabis sativa HOM05D004210 ORTHO05D005017 2.1e-215 752.7 521 72.4
Sabra16G0191800 Salix brachista HOM05D004210 ORTHO05D005017 3.5e-215 751.9 565 69.4
Cc08_g06030 Coffea canephora HOM05D004210 ORTHO05D005017 2.3e-214 749.2 525 72.0
ClCG05G022120 Citrullus lanatus HOM05D004210 ORTHO05D005017 5.1e-214 748.0 559 69.1
QL04p049870 Quercus lobata HOM05D004210 ORTHO05D005017 1.1e-213 746.9 482 75.5
Sed0024731 Sechium edule HOM05D004210 ORTHO05D005017 1.5e-213 746.5 559 68.5
MELO3C012312.2 Cucumis melo HOM05D004210 ORTHO05D005017 1.9e-213 746.1 559 68.7
ATR0661G188 Amborella trichopoda HOM05D004210 ORTHO05D005017 2.5e-213 745.7 542 70.5
Gorai.013G003300 Gossypium raimondii HOM05D004210 ORTHO05D005017 7.4e-213 744.2 563 69.1
Gohir.D13G003400 Gossypium hirsutum HOM05D004210 ORTHO05D005017 9.7e-213 743.8 563 69.1
Sabra19G0014200 Salix brachista HOM05D004210 ORTHO05D005017 2.2e-212 742.7 559 68.2
CsaV3_5G035020 Cucumis sativus L. HOM05D004210 ORTHO05D005017 2.8e-212 742.3 559 68.5
Nitab4.5_0004014g0070 Nicotiana tabacum HOM05D004210 ORTHO05D005017 2.8e-212 742.3 536 70.7
Sabra19G0005800 Salix brachista HOM05D004210 ORTHO05D005017 2.8e-212 742.3 559 68.0
Prupe.5G058900 Prunus persica HOM05D004210 ORTHO05D005017 3.7e-212 741.9 520 71.3
Glyma.13G124200 Glycine max HOM05D004210 ORTHO05D005017 4.8e-212 741.5 546 70.1
PSO478G0462 Papaver somniferum HOM05D004210 ORTHO05D005017 4.8e-212 741.5 552 69.4
Rhsim04G0193600 Rhododendron simsii HOM05D004210 ORTHO05D005017 6.3e-212 741.1 517 72.1
Glyma.06G315900 Glycine max HOM05D004210 ORTHO05D005017 8.2e-212 740.7 546 70.0
Peaxi162Scf00647g00139 Petunia axillaris HOM05D004210 ORTHO05D005017 8.2e-212 740.7 533 70.9
Ciclev10014800m.g Citrus clementina HOM05D004210 ORTHO05D005017 3.1e-211 738.8 559 68.5
Atru.chr10.436 Acer truncatum HOM05D004210 ORTHO05D005017 5.3e-211 738.0 559 68.2
Gohir.A13G003500 Gossypium hirsutum HOM05D004210 ORTHO05D005017 6.9e-211 737.6 563 68.9
Sed0005167 Sechium edule HOM05D004210 ORTHO05D005017 5.9e-210 734.6 546 69.6
MSTRG.20468 Avicennia marina HOM05D004210 ORTHO05D005017 7.6e-210 734.2 513 72.1
GSVIVG01018295001 Vitis vinifera HOM05D004210 ORTHO05D005017 7.6e-210 734.2 549 70.3
vmacro20845 Vaccinium macrocarpon HOM05D004210 ORTHO05D005017 2.2e-209 732.6 517 71.2
Phvul.003G276000 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 2.9e-209 732.3 547 69.1
RcHm_v2.0_Chr6g0268021 Rosa chinensis HOM05D004210 ORTHO05D005017 3.8e-209 731.9 518 71.0
Lj8A287G21 Lonicera japonica HOM05D004210 ORTHO05D005017 6.5e-209 731.1 565 68.3
Glyma.05G087400 Glycine max HOM05D004210 ORTHO05D005017 1.4e-208 729.9 551 68.2
arahy.Tifrunner.gnm1.ann1.374KBL Arachis hypogaea HOM05D004210 ORTHO05D005017 1.9e-208 729.6 546 69.4
FvH4_2g10510 Fragaria vesca HOM05D004210 ORTHO05D005017 3.2e-208 728.8 518 70.7
Glyma.08G229800 Glycine max HOM05D004210 ORTHO05D005017 9.3e-208 727.2 559 67.4
CSS0018495 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 1.6e-207 726.5 548 67.7
Lj3g0025560 Lotus japonicus HOM05D004210 ORTHO05D005017 2.1e-207 726.1 525 70.3
FAN24G2713 Fragaria x ananassa HOM05D004210 ORTHO05D005017 2.7e-207 725.7 518 70.5
arahy.Tifrunner.gnm1.ann1.3JDG4T Arachis hypogaea HOM05D004210 ORTHO05D005017 3.6e-207 725.3 546 69.0
FAN20G0431 Fragaria x ananassa HOM05D004210 ORTHO05D005017 3.6e-207 725.3 518 70.5
FAN15G0031 Fragaria x ananassa HOM05D004210 ORTHO05D005017 4.6e-207 724.9 518 70.3
TAR381G0930 Trochodendron aralioides HOM05D004210 ORTHO05D005017 1.0e-206 723.8 470 75.7
arahy.Tifrunner.gnm1.ann1.A6SQAT Arachis hypogaea HOM05D004210 ORTHO05D005017 1.8e-206 723.0 546 69.0
Phvul.008G161500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 1.8e-206 723.0 546 67.9
VMungo0251G3202 Vigna mungo HOM05D004210 ORTHO05D005017 1.8e-206 723.0 547 68.2
TPR.G14605 Trifolium pratense HOM05D004210 ORTHO05D005017 3.0e-206 722.2 525 69.3
MD07G1061200 Malus domestica HOM05D004210 ORTHO05D005017 6.7e-206 721.1 499 70.9
FAN27G0821 Fragaria x ananassa HOM05D004210 ORTHO05D005017 4.3e-205 718.4 523 69.6
TPR.G24022 Trifolium pratense HOM05D004210 ORTHO05D005017 2.2e-204 716.1 532 68.2
Sc18g0006930 Simmondsia chinensis HOM05D004210 ORTHO05D005017 3.7e-204 715.3 566 65.9
Lalb_Chr01g0007661 Lupinus albus HOM05D004210 ORTHO05D005017 1.4e-203 713.4 525 69.3
Psat4g180480 Pisum sativum HOM05D004210 ORTHO05D005017 5.3e-203 711.4 565 65.7
Sopen01g040660 Solanum pennellii HOM05D004210 ORTHO05D005017 2.0e-202 709.5 533 67.7
Medtr8g041740 Medicago truncatula HOM05D004210 ORTHO05D005017 2.6e-202 709.1 544 67.3
PGSC0003DMG400027522 Solanum tuberosum HOM05D004210 ORTHO05D005017 2.6e-202 709.1 535 67.9
Aa31LG8G7780 Aethionema arabicum HOM05D004210 ORTHO05D005017 1.7e-201 706.4 559 65.3
MD02G1259400 Malus domestica HOM05D004210 ORTHO05D005017 5.0e-201 704.9 499 69.7
Solyc01g096950.4 Solanum lycopersicum HOM05D004210 ORTHO05D005017 1.4e-200 703.4 533 67.5
Migut.B01123 Erythranthe guttata HOM05D004210 ORTHO05D005017 2.5e-200 702.6 525 69.0
THA.LOC104804661 Tarenaya hassleriana HOM05D004210 ORTHO05D005017 2.5e-200 702.6 558 65.6
Hund00055 Selenicereus undatus HOM05D004210 ORTHO05D005017 4.2e-200 701.8 628 61.0
Ca_05576_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 5.5e-200 701.4 561 65.1
Glyma.04G129500 Glycine max HOM05D004210 ORTHO05D005017 1.6e-199 699.9 480 72.9
SalBow4G0418 Salvia bowleyana HOM05D004210 ORTHO05D005017 2.7e-199 699.1 525 67.6
Medtr8g045440 Medicago truncatula HOM05D004210 ORTHO05D005017 6.1e-199 698.0 563 64.8
Hund06390 Selenicereus undatus HOM05D004210 ORTHO05D005017 3.9e-198 695.3 532 67.3
DCAR_002139 Daucus carota HOM05D004210 ORTHO05D005017 3.3e-197 692.2 547 64.5
Thhalv10020461m.g Eutrema salsugineum HOM05D004210 ORTHO05D005017 3.3e-197 692.2 559 64.0
EL10Ac7g18124 Beta vulgaris HOM05D004210 ORTHO05D005017 9.7e-197 690.6 534 67.6
AUR62001320 Chenopodium quinoa HOM05D004210 ORTHO05D005017 9.7e-197 690.6 559 64.2
AUR62025703 Chenopodium quinoa HOM05D004210 ORTHO05D005017 1.7e-196 689.9 560 64.5
Lsat_1_v5_gn_4_138820 Lactuca sativa HOM05D004210 ORTHO05D005017 3.1e-195 685.6 569 66.4
Psat4g200760 Pisum sativum HOM05D004210 ORTHO05D005017 4.1e-195 685.3 545 65.5
Oeu012473.1 Olea europaea HOM05D004210 ORTHO05D005017 1.2e-194 683.7 488 69.7
Sabra19G0013500 Salix brachista HOM05D004210 ORTHO05D005017 2.0e-194 682.9 510 68.6
ECA248G0690 Erigeron canadensis HOM05D004210 ORTHO05D005017 2.6e-194 682.6 524 67.0
Carub.0003s2096 Capsella rubella HOM05D004210 ORTHO05D005017 5.9e-194 681.4 560 63.8
Sp3g19020 Schrenkiella parvula HOM05D004210 ORTHO05D005017 5.9e-194 681.4 560 63.9
Hma1.2p1_0892F.1_g233380 Hydrangea macrophylla HOM05D004210 ORTHO05D005017 1.7e-193 679.9 520 68.8
Duzib106G1791 Durio zibethinus HOM05D004210 ORTHO05D005017 2.9e-193 679.1 523 68.8
Sabra19G0006000 Salix brachista HOM05D004210 ORTHO05D005017 2.9e-193 679.1 510 68.4
AT3G21060 Arabidopsis thaliana HOM05D004210 ORTHO05D005017 4.2e-192 675.2 560 64.1
Medtr8g045463 Medicago truncatula HOM05D004210 ORTHO05D005017 7.2e-192 674.5 548 63.5
Medtr8g045470 Medicago truncatula HOM05D004210 ORTHO05D005017 7.2e-192 674.5 548 63.5
Oeu027040.1 Olea europaea HOM05D004210 ORTHO05D005017 1.0e-190 670.6 464 71.1
BraA01t03490Z Brassica rapa HOM05D004210 ORTHO05D005017 2.3e-190 669.5 546 63.2
Lalb_Chr18g0049111 Lupinus albus HOM05D004210 ORTHO05D005017 2.3e-190 669.5 547 63.6
C01p43210 Brassica napus HOM05D004210 ORTHO05D005017 5.2e-190 668.3 559 63.0
BcaC09g49045 Brassica carinata HOM05D004210 ORTHO05D005017 1.5e-189 666.8 559 62.8
BolC1t04267H Brassica oleracea HOM05D004210 ORTHO05D005017 4.4e-189 665.2 559 62.4
Os03g0207900 Oryza sativa ssp. japonica HOM05D004210 ORTHO05D005017 5.9e-186 654.8 568 62.1
BcaB04g20615 Brassica carinata HOM05D004210 ORTHO05D005017 1.7e-185 653.3 559 61.2
CARHR096890 Cardamine hirsuta HOM05D004210 ORTHO05D005017 6.5e-185 651.4 558 62.0
VMungo0647G0038 Vigna mungo HOM05D004210 ORTHO05D005017 1.6e-183 646.7 511 65.4
Manes.13G077346 Manihot esculenta HOM05D004210 ORTHO05D005017 1.8e-182 643.3 408 75.7
HanXRQChr09g0259631 Helianthus annuus HOM05D004210 ORTHO05D005017 3.0e-182 642.5 564 63.1
Zm00001eb007220 Zea mays HOM05D004210 ORTHO05D005017 5.2e-182 641.7 564 60.3
AL3G35010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 3.8e-177 625.5 547 61.4
SGA_v2.0_scaffold196G40978 Striga asiatica HOM05D004210 ORTHO05D005017 5.2e-174 615.1 549 60.1
Ca_13103_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 3.5e-170 602.4 559 58.5
A01p33790 Brassica napus HOM05D004210 ORTHO05D005017 1.7e-169 600.1 509 62.1
AL249U10010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 5.0e-169 598.6 402 69.9
Pp3c12_14420 Physcomitrium patens HOM05D004210 ORTHO05D005017 8.6e-161 571.2 568 54.6
HanXRQChr14g0446551 Helianthus annuus HOM05D004210 ORTHO05D005017 1.2e-157 560.8 499 59.9
ECA238G3001 Erigeron canadensis HOM05D004210 ORTHO05D005017 1.3e-156 557.4 524 58.8
Mapoly0028s0049 Marchantia polymorpha HOM05D004210 ORTHO05D005017 2.9e-156 556.2 557 55.3
Psat2g059840 Pisum sativum HOM05D004210 ORTHO05D005017 4.3e-152 542.3 546 53.7
Ca_24139_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 4.7e-143 512.3 546 53.8
Eucgr.G02654 Eucalyptus grandis HOM05D004210 ORTHO05D005017 6.2e-143 511.9 435 63.0
TWI75G1118 Tripterygium wilfordii HOM05D004210 ORTHO05D005017 4.9e-140 502.3 505 53.9
AagrBONN_evm.TU.Sc2ySwM_344.4521 Anthoceros agrestis HOM05D004210 ORTHO05D005017 7.8e-138 495.0 566 49.1
Dinv30359 Davidia involucrata HOM05D004210 ORTHO05D005017 4.7e-135 485.7 375 69.9
Lalb_Chr03g0032281 Lupinus albus HOM05D004210 ORTHO05D005017 6.8e-134 481.9 432 61.8
SMO145G0186 Selaginella moellendorffii HOM05D004210 ORTHO05D005017 1.7e-132 477.2 553 50.3
AagrBONN_evm.TU.Sc2ySwM_368.940 Anthoceros agrestis HOM05D004210 ORTHO05D005017 1.0e-129 468.0 584 46.7
Ca_24147_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 1.3e-129 467.6 366 66.9
Phvul.011G184500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 3.0e-121 439.9 477 51.4
unitig_26.g9497 Utricularia gibba HOM05D004210 ORTHO05D005017 1.9e-120 437.2 381 60.4
CSS0025743 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 4.6e-106 389.4 389 56.6
SEGI_20000 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 1.1e-104 384.8 306 59.8
CBR_g18561 Chara braunii HOM05D004210 ORTHO05D005017 5.6e-104 382.5 531 42.2
CBR_g10843 Chara braunii HOM05D004210 ORTHO05D005017 6.5e-100 369.0 579 41.5
Dinv18710 Davidia involucrata HOM05D004210 ORTHO05D005017 2.4e-78 297.4 321 55.8
MBI16_g14436_MAGBIO Magnolia biondii HOM05D004210 ORTHO05D005017 2.9e-60 237.3 312 49.0
Cre03.g195750 Chlamydomonas reinhardtii HOM05D004210 ORTHO05D005017 3.2e-59 233.8 533 32.3
Dinv18720 Davidia involucrata HOM05D004210 ORTHO05D005017 5.5e-59 233.0 168 75.0
SEGI_15684 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 1.6e-58 231.5 251 56.2
MCO03G571 Micromonas commoda HOM05D004210 ORTHO05D005017 1.8e-49 201.4 406 32.3
PRCOL_00000885 Prasinoderma coloniale HOM05D004210 ORTHO05D005017 4.9e-47 193.4 466 31.1
Pp3c4_7580 Physcomitrium patens HOM05D004210 ORTHO05D005017 4.5e-45 186.8 385 37.7
Glyma.12G171232 Glycine max HOM05D004210 ORTHO05D013328 9.5e-43 179.1 97 82.5
Cfa023087 Carpinus fangiana HOM05D004210 ORTHO05D005017 6.8e-41 172.9 440 29.8
Atru.chr12.1163 Acer truncatum HOM05D004210 ORTHO05D005017 1.2e-40 172.2 91 86.8
Rhsim01G0121500 Rhododendron simsii HOM05D004210 ORTHO05D005017 1.4e-38 165.2 112 74.1
Aa31LG8G7760 Aethionema arabicum HOM05D004210 ORTHO05D005017 2.5e-35 154.5 118 63.6
Dinv18721 Davidia involucrata HOM05D004210 ORTHO05D005017 3.1e-33 147.5 158 52.5
VMungo1127G1364 Vigna mungo HOM05D004210 ORTHO05D005017 1.3e-31 142.1 161 46.6
Manes.13G077544 Manihot esculenta HOM05D004210 ORTHO05D005017 7.1e-30 136.3 157 59.9
Atru.chr12.1162 Acer truncatum HOM05D004210 ORTHO05D005017 2.8e-26 124.4 158 53.2
Medtr5g069620 Medicago truncatula HOM05D004210 ORTHO05D005017 2.3e-20 104.8 84 57.1
Nn1g02745 Nelumbo nucifera HOM05D000508 ORTHO05D000371 3.9e-20 104.0 164 39.0
Nn1g04650 Nelumbo nucifera HOM05D004210 ORTHO05D005017 9.3e-14 82.8 40 92.5
Hma1.2p1_0892F.1_g233370 Hydrangea macrophylla HOM05D004210 ORTHO05D005017 1.6e-13 82.0 40 87.5
unitig_26.g9496 Utricularia gibba HOM05D004210 ORTHO05D005017 1.9e-11 75.1 48 68.8
Lalb_Chr03g0032271 Lupinus albus HOM05D004210 ORTHO05D005017 4.0e-09 67.4 32 90.6
SHI06412 Sapria himalayana HOM05D004210 ORTHO05D000023 4.0e-09 67.4 33 84.8
BcaC01g03529 Brassica carinata HOM05D004210 ORTHO05D005017 7.1e-06 56.6 108 34.3


User provided reference genes

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