Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1888 Ceratophyllum demersum HOM05D000592 ORTHO05D000900 1.2e-220 769.6 418 100.0
CDE07G1883 Ceratophyllum demersum HOM05D000592 ORTHO05D000900 1.1e-109 401.0 367 66.2
CDE04G3460 Ceratophyllum demersum HOM05D000592 ORTHO05D000900 1.4e-46 191.4 137 82.5
CDE04G0033 Ceratophyllum demersum HOM05D000219 ORTHO05D006860 6.2e-23 112.8 58 98.3
Os08g0109200 Oryza sativa ssp. japonica HOM05D000219 ORTHO05D006860 3.2e-19 100.5 63 77.8
Zm00001eb260390 Zea mays HOM05D000219 ORTHO05D006860 1.6e-18 98.2 64 75.0
Zm00001eb174190 Zea mays HOM05D000219 ORTHO05D006860 2.7e-18 97.4 64 75.0
PSO017G4982 Papaver somniferum HOM05D000219 ORTHO05D006860 4.6e-18 96.7 63 74.6
Zm00001eb282680 Zea mays HOM05D000219 ORTHO05D006860 4.6e-18 96.7 63 74.6
Dinv16804 Davidia involucrata HOM05D009734 ORTHO05D012100 1.3e-17 95.1 63 73.0
Zm00001eb270900 Zea mays HOM05D000219 ORTHO05D006860 1.3e-17 95.1 64 73.4
Hma1.2p1_0057F.1_g032090 Hydrangea macrophylla HOM05D000219 ORTHO05D006860 3.9e-17 93.6 63 73.0
Aqoxy5G02644 Aquilegia oxysepala HOM05D000219 ORTHO05D006860 5.1e-17 93.2 63 69.8
Nn1g08449 Nelumbo nucifera HOM05D000219 ORTHO05D006860 8.7e-17 92.4 63 71.4
MSTRG.23502 Avicennia marina HOM05D000219 ORTHO05D006860 1.1e-16 92.0 63 71.4
TAR362G0321 Trochodendron aralioides HOM05D000219 ORTHO05D006860 1.1e-16 92.0 63 69.8
DCAR_006648 Daucus carota HOM05D000219 ORTHO05D006860 1.9e-16 91.3 63 68.3
Eucgr.I00009 Eucalyptus grandis HOM05D000219 ORTHO05D006860 1.9e-16 91.3 63 65.1
PGR142G1791 Punica granatum HOM05D000219 ORTHO05D006860 1.9e-16 91.3 62 66.1
Migut.H00794 Erythranthe guttata HOM05D000219 ORTHO05D006860 2.5e-16 90.9 63 68.3
CAN.G1464.10 Capsicum annuum HOM05D000219 ORTHO05D006860 3.3e-16 90.5 63 71.4
Thecc.01G237700 Theobroma cacao HOM05D000219 ORTHO05D006860 3.3e-16 90.5 63 66.7
Actinidia35957 Actinidia chinensis HOM05D000219 ORTHO05D006860 4.3e-16 90.1 63 68.3
ClCG04G003060 Citrullus lanatus HOM05D000219 ORTHO05D006860 4.3e-16 90.1 62 66.1
CsaV3_4G027540 Cucumis sativus L. HOM05D000219 ORTHO05D006860 4.3e-16 90.1 62 66.1
Solyc05g056540.4 Solanum lycopersicum HOM05D000219 ORTHO05D006860 4.3e-16 90.1 63 69.8
Sopen05g034940 Solanum pennellii HOM05D000219 ORTHO05D006860 4.3e-16 90.1 63 69.8
PGSC0003DMG400023319 Solanum tuberosum HOM05D000219 ORTHO05D006860 4.3e-16 90.1 63 69.8
Sed0016333 Sechium edule HOM05D000219 ORTHO05D006860 5.6e-16 89.7 62 64.5
ATR1136G037 Amborella trichopoda HOM05D000219 ORTHO05D006860 7.3e-16 89.4 63 66.7
Nitab4.5_0002704g0020 Nicotiana tabacum HOM05D000219 ORTHO05D006860 7.3e-16 89.4 63 69.8
Peaxi162Scf00525g00058 Petunia axillaris HOM05D000219 ORTHO05D006860 7.3e-16 89.4 63 69.8
GSVIVG01022421001 Vitis vinifera HOM05D000219 ORTHO05D006860 7.3e-16 89.4 63 66.7
Haze_25420 Corylus avellana HOM05D000219 ORTHO05D006860 9.6e-16 89.0 66 60.6
HanXRQChr17g0555771 Helianthus annuus HOM05D000219 ORTHO05D006860 9.6e-16 89.0 63 66.7
Nitab4.5_0000496g0010 Nicotiana tabacum HOM05D000219 ORTHO05D006860 9.6e-16 89.0 63 69.8
QL10p038963 Quercus lobata HOM05D000219 ORTHO05D006860 9.6e-16 89.0 63 65.1
Lsat_1_v5_gn_8_133760 Lactuca sativa HOM05D000219 ORTHO05D006860 1.2e-15 88.6 63 65.1
SGA_v2.0_scaffold54G19580 Striga asiatica HOM05D000219 ORTHO05D006860 1.2e-15 88.6 63 66.7
Cc04_g09500 Coffea canephora HOM05D000219 ORTHO05D006860 2.1e-15 87.8 63 65.1
Duzib147G0918 Durio zibethinus HOM05D000219 ORTHO05D006860 2.1e-15 87.8 63 63.5
RcHm_v2.0_Chr2g0123611 Rosa chinensis HOM05D000219 ORTHO05D006860 2.1e-15 87.8 63 63.5
Sc09g0004320 Simmondsia chinensis HOM05D000219 ORTHO05D006860 2.1e-15 87.8 62 66.1
Cfa002239 Carpinus fangiana HOM05D000219 ORTHO05D006860 3.6e-15 87.0 63 61.9
Hund22176 Selenicereus undatus HOM05D000219 ORTHO05D006860 3.6e-15 87.0 62 62.9
Ah.04g163090 Amaranthus hybridus HOM05D000219 ORTHO05D006860 6.2e-15 86.3 62 64.5
Gohir.A10G154900 Gossypium hirsutum HOM05D000219 ORTHO05D006860 6.2e-15 86.3 63 61.9
Gohir.D10G111000 Gossypium hirsutum HOM05D000219 ORTHO05D006860 6.2e-15 86.3 63 61.9
Gorai.011G122400 Gossypium raimondii HOM05D000219 ORTHO05D006860 6.2e-15 86.3 63 61.9
Lj4A816G40 Lonicera japonica HOM05D000219 ORTHO05D006860 6.2e-15 86.3 63 63.5
vmacro00498 Vaccinium macrocarpon HOM05D000219 ORTHO05D006860 8.1e-15 85.9 63 65.1
Atru.chr4.1141 Acer truncatum HOM05D000219 ORTHO05D006860 1.1e-14 85.5 62 62.9
AUR62004811 Chenopodium quinoa HOM05D000219 ORTHO05D006860 1.1e-14 85.5 62 64.5
BraA06t25973Z Brassica rapa HOM05D000219 ORTHO05D006860 1.4e-14 85.1 63 61.9
AUR62036030 Chenopodium quinoa HOM05D000219 ORTHO05D006860 1.4e-14 85.1 62 62.9
Thhalv10005729m.g Eutrema salsugineum HOM05D000219 ORTHO05D006860 1.4e-14 85.1 63 61.9
Manes.13G076700 Manihot esculenta HOM05D000219 ORTHO05D006860 1.4e-14 85.1 63 60.3
Sp2g26710 Schrenkiella parvula HOM05D000219 ORTHO05D006860 1.4e-14 85.1 63 61.9
AL8G40740 Arabidopsis lyrata HOM05D000219 ORTHO05D006860 1.8e-14 84.7 63 61.9
AT5G63620 Arabidopsis thaliana HOM05D000219 ORTHO05D006860 1.8e-14 84.7 63 61.9
BcaB02g09744 Brassica carinata HOM05D000219 ORTHO05D006860 1.8e-14 84.7 63 61.9
BcaC01g02616 Brassica carinata HOM05D000219 ORTHO05D006860 1.8e-14 84.7 63 61.9
A06p30240 Brassica napus HOM05D000219 ORTHO05D006860 1.8e-14 84.7 63 61.9
C03p62820 Brassica napus HOM05D000219 ORTHO05D006860 1.8e-14 84.7 63 61.9
BolC3t18536H Brassica oleracea HOM05D000219 ORTHO05D006860 1.8e-14 84.7 63 61.9
Carub.0008s2438 Capsella rubella HOM05D000219 ORTHO05D006860 1.8e-14 84.7 63 61.9
ClCG04G003090 Citrullus lanatus HOM05D000219 ORTHO05D006860 1.8e-14 84.7 62 61.3
TWI79G1643 Tripterygium wilfordii HOM05D000219 ORTHO05D006860 1.8e-14 84.7 62 62.9
Ca_17594_v3 Cicer arietinum L. HOM05D000219 ORTHO05D006860 2.4e-14 84.3 63 60.3
ECA232G1642 Erigeron canadensis HOM05D000219 ORTHO05D006860 2.4e-14 84.3 60 66.7
Psat7g041480 Pisum sativum HOM05D000219 ORTHO05D006860 2.4e-14 84.3 63 61.9
FvH4_1g25480 Fragaria vesca HOM05D000219 ORTHO05D006860 3.1e-14 84.0 63 58.7
FAN26G2023 Fragaria x ananassa HOM05D000219 ORTHO05D006860 3.1e-14 84.0 63 58.7
FAN28G2501 Fragaria x ananassa HOM05D000219 ORTHO05D006860 3.1e-14 84.0 63 58.7
Glyma.08G004800 Glycine max HOM05D000219 ORTHO05D006860 3.1e-14 84.0 63 63.5
QL10p038869 Quercus lobata HOM05D000219 ORTHO05D006860 3.1e-14 84.0 62 62.9
CARHR277500 Cardamine hirsuta HOM05D000219 ORTHO05D006860 4.0e-14 83.6 63 60.3
Ciclev10025619m.g Citrus clementina HOM05D000219 ORTHO05D006860 4.0e-14 83.6 63 60.3
Potri.004G138700 Populus trichocarpa HOM05D000219 ORTHO05D006860 4.0e-14 83.6 63 61.9
Sabra19G0009100 Salix brachista HOM05D000219 ORTHO05D006860 4.0e-14 83.6 63 63.5
THA.LOC104800311 Tarenaya hassleriana HOM05D000219 ORTHO05D006860 4.0e-14 83.6 63 61.9
Cpa.g.sc47.14 Carica papaya HOM05D000219 ORTHO05D006860 5.2e-14 83.2 63 58.7
Lj4g0001086 Lotus japonicus HOM05D000219 ORTHO05D006860 5.2e-14 83.2 62 61.3
Medtr8g095220 Medicago truncatula HOM05D000219 ORTHO05D006860 5.2e-14 83.2 63 60.3
Potri.T010600 Populus trichocarpa HOM05D000219 ORTHO05D006860 5.2e-14 83.2 63 61.9
unitig_62.g23446 Utricularia gibba HOM05D000219 ORTHO05D006860 5.2e-14 83.2 63 60.3
Glyma.05G197400 Glycine max HOM05D000219 ORTHO05D006860 6.9e-14 82.8 63 61.9
Phvul.002G277900 Phaseolus vulgaris HOM05D000219 ORTHO05D006860 6.9e-14 82.8 63 60.3
Sabra19G0003100 Salix brachista HOM05D000219 ORTHO05D006860 9.0e-14 82.4 63 61.9
Sabra19G0007500 Salix brachista HOM05D000219 ORTHO05D006860 9.0e-14 82.4 63 61.9
Sabra19G0007700 Salix brachista HOM05D000219 ORTHO05D006860 9.0e-14 82.4 63 61.9
Sabra19G0007900 Salix brachista HOM05D000219 ORTHO05D006860 9.0e-14 82.4 63 61.9
Sabra19G0008200 Salix brachista HOM05D000219 ORTHO05D006860 9.0e-14 82.4 63 61.9
Sabra19G0008600 Salix brachista HOM05D000219 ORTHO05D006860 9.0e-14 82.4 63 61.9
Rhsim09G0052000 Rhododendron simsii HOM05D000219 ORTHO05D006860 1.2e-13 82.0 63 60.3
TPR.G12844 Trifolium pratense HOM05D000219 ORTHO05D006860 1.2e-13 82.0 63 58.7
VMungo0251G2495 Vigna mungo HOM05D000219 ORTHO05D006860 1.2e-13 82.0 63 58.7
Aa31LG1G18290 Aethionema arabicum HOM05D000219 ORTHO05D006860 1.5e-13 81.6 62 61.3
arahy.Tifrunner.gnm1.ann1.4SGX54 Arachis hypogaea HOM05D000219 ORTHO05D006860 2.0e-13 81.3 62 61.3
arahy.Tifrunner.gnm1.ann1.8C4MGB Arachis hypogaea HOM05D000219 ORTHO05D006860 2.0e-13 81.3 62 61.3
Prupe.4G281800 Prunus persica HOM05D000219 ORTHO05D006860 2.0e-13 81.3 63 60.3
EL10Ac4g08974 Beta vulgaris HOM05D000219 ORTHO05D006860 2.6e-13 80.9 62 61.3
Lalb_Chr07g0184051 Lupinus albus HOM05D000219 ORTHO05D006860 2.6e-13 80.9 63 61.9
MD00G1129200 Malus domestica HOM05D000219 ORTHO05D006860 3.4e-13 80.5 63 57.1
CANSAT80G0242 Cannabis sativa HOM05D000219 ORTHO05D006860 5.8e-13 79.7 63 57.1
Sabra19G0052800 Salix brachista HOM05D000219 ORTHO05D006860 1.7e-12 78.2 63 57.1
Sabra11G0076000 Salix brachista HOM05D004685 ORTHO05D005412 2.9e-12 77.4 63 58.7
SEGI_31178 Sequoiadendron giganteum HOM05D000219 ORTHO05D006860 6.4e-12 76.3 63 55.6
Hma1.2p1_1805F.1_g303110 Hydrangea macrophylla HOM05D000592 ORTHO05D000900 8.4e-12 75.9 307 28.7
Hma1.2p1_0264F.1_g105920 Hydrangea macrophylla HOM05D000592 ORTHO05D000900 5.4e-11 73.2 307 28.3
SMO353G0118 Selaginella moellendorffii HOM05D000219 ORTHO05D006860 6.0e-10 69.7 61 50.8
Hund13435 Selenicereus undatus HOM05D000592 ORTHO05D000900 3.9e-09 67.0 348 24.4
TAR633G2344 Trochodendron aralioides HOM05D000592 ORTHO05D000900 1.1e-08 65.5 313 28.8
Dinv21860 Davidia involucrata HOM05D000592 ORTHO05D000900 1.5e-08 65.1 333 27.0
MD01G1170000 Malus domestica HOM05D000592 ORTHO05D000900 1.5e-08 65.1 327 26.6
Prupe.2G266000 Prunus persica HOM05D000592 ORTHO05D000900 2.5e-08 64.3 312 23.4
Manes.07G141800 Manihot esculenta HOM05D000592 ORTHO05D000900 3.3e-08 63.9 301 25.2
EL10Ac2g02670 Beta vulgaris HOM05D000592 ORTHO05D000900 4.3e-08 63.5 369 26.3
Mapoly0014s0120 Marchantia polymorpha HOM05D000219 ORTHO05D006860 5.6e-08 63.2 62 50.0
FAN06G2529 Fragaria x ananassa HOM05D000592 ORTHO05D000900 1.3e-07 62.0 338 24.6
PSO017G4207 Papaver somniferum HOM05D000592 ORTHO05D000900 3.6e-07 60.5 341 25.8
BraA09t36487Z Brassica rapa HOM05D000219 ORTHO05D006860 1.8e-06 58.2 46 58.7
FvH4_7g26161 Fragaria vesca HOM05D000592 ORTHO05D000900 6.9e-06 56.2 304 23.7


User provided reference genes

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