Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1884 Ceratophyllum demersum HOM05D044379 ORTHO05D003520 1.3e-224 782.7 404 100.0
CDE08G1412 Ceratophyllum demersum HOM05D044379 ORTHO05D003520 3.7e-190 668.3 401 85.5
Nn2g10861 Nelumbo nucifera HOM05D003726 ORTHO05D003520 9.8e-34 148.7 440 32.0
Nn2g13146 Nelumbo nucifera HOM05D003726 ORTHO05D003520 1.6e-28 131.3 439 32.8
MBI03_g31834_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 4.9e-25 119.8 454 29.7
Cfa011708 Carpinus fangiana HOM05D003726 ORTHO05D003520 1.1e-24 118.6 417 29.7
TAR369G0146 Trochodendron aralioides HOM05D003726 ORTHO05D003520 2.4e-24 117.5 417 28.1
MBI03_g32367_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 4.1e-24 116.7 452 29.6
CiPaw.13G076400 Carya illinoinensis HOM05D003726 ORTHO05D003520 2.7e-23 114.0 442 27.4
Aqoxy4G02538 Aquilegia oxysepala HOM05D003726 ORTHO05D003520 3.3e-21 107.1 417 28.1
QL01p038574 Quercus lobata HOM05D003726 ORTHO05D003520 2.1e-20 104.4 438 29.5
Dinv28651 Davidia involucrata HOM05D003726 ORTHO05D003520 1.8e-19 101.3 429 27.0
Potri.009G046900 Populus trichocarpa HOM05D003726 ORTHO05D003520 4.0e-19 100.1 442 26.9
CSS0031801 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 4.4e-18 96.7 365 31.5
TAR623G0590 Trochodendron aralioides HOM05D003726 ORTHO05D003520 7.6e-18 95.9 410 29.5
Hma1.2p1_0962F.1_g241820 Hydrangea macrophylla HOM05D003726 ORTHO05D003520 9.9e-18 95.5 403 28.0
Sabra09G0034300 Salix brachista HOM05D003726 ORTHO05D003520 2.9e-17 94.0 436 27.5
CiPaw.14G058500 Carya illinoinensis HOM05D003726 ORTHO05D003520 3.8e-17 93.6 433 28.9
Haze_24339 Corylus avellana HOM05D003726 ORTHO05D003520 8.4e-17 92.4 405 27.7
Thecc.09G299900 Theobroma cacao HOM05D003726 ORTHO05D003520 1.9e-16 91.3 423 27.4
Cpa.g.sc112.4 Carica papaya HOM05D003726 ORTHO05D003520 1.2e-15 88.6 437 26.5
Haze_21015 Corylus avellana HOM05D003726 ORTHO05D003520 2.1e-15 87.8 400 27.2
CSS0008670 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 4.6e-15 86.7 370 30.0
Ciclev10011806m.g Citrus clementina HOM05D003726 ORTHO05D003520 3.9e-14 83.6 414 28.0
Cfa017195 Carpinus fangiana HOM05D003726 ORTHO05D003520 5.1e-14 83.2 400 26.8
Gorai.009G091100 Gossypium raimondii HOM05D003726 ORTHO05D003520 2.5e-13 80.9 420 27.9
Gohir.D05G088900 Gossypium hirsutum HOM05D003726 ORTHO05D003520 3.3e-13 80.5 426 27.5
COL.COLO4_19173 Corchorus olitorius HOM05D003726 ORTHO05D003520 4.3e-13 80.1 416 29.1
TPR.G13333 Trifolium pratense HOM05D003726 ORTHO05D003520 1.6e-12 78.2 407 26.5
Lalb_Chr18g0050991 Lupinus albus HOM05D003726 ORTHO05D003520 2.1e-12 77.8 432 25.2
Duzib168G1865 Durio zibethinus HOM05D003726 ORTHO05D003520 2.8e-12 77.4 431 26.2
Gohir.A05G087800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 3.6e-12 77.0 420 27.9
Dinv03102 Davidia involucrata HOM05D003726 ORTHO05D003520 8.1e-12 75.9 308 28.2
Medtr3g464300 Medicago truncatula HOM05D003726 ORTHO05D003520 1.1e-11 75.5 438 26.3
TPR.G15189 Trifolium pratense HOM05D003726 ORTHO05D003520 1.1e-11 75.5 438 26.7
Ah.08g221410 Amaranthus hybridus HOM05D003726 ORTHO05D003520 1.4e-11 75.1 385 27.0
DCAR_005887 Daucus carota HOM05D003726 ORTHO05D003520 1.4e-11 75.1 426 27.2
Glyma.11G174300 Glycine max HOM05D003726 ORTHO05D003520 5.3e-11 73.2 442 23.8
Manes.02G118700 Manihot esculenta HOM05D003726 ORTHO05D003520 1.2e-10 72.0 446 24.4
Atru.chr8.2256 Acer truncatum HOM05D003726 ORTHO05D003520 3.4e-10 70.5 413 27.1
Glyma.07G151200 Glycine max HOM05D003726 ORTHO05D003520 4.4e-10 70.1 430 26.5
Prupe.6G056200 Prunus persica HOM05D003726 ORTHO05D003520 7.6e-10 69.3 408 26.2
EL10Ac7g16184 Beta vulgaris HOM05D003726 ORTHO05D003520 9.9e-10 68.9 443 24.6
RcHm_v2.0_Chr5g0069911 Rosa chinensis HOM05D003726 ORTHO05D003520 9.9e-10 68.9 401 26.9
COL.COLO4_14518 Corchorus olitorius HOM05D003726 ORTHO05D003520 8.4e-09 65.9 398 26.6
Lj3g0010607 Lotus japonicus HOM05D003726 ORTHO05D003520 8.4e-09 65.9 431 23.2
TWI31G1278 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 1.9e-08 64.7 420 23.1
Nitab4.5_0000261g0020 Nicotiana tabacum HOM05D003726 ORTHO05D003520 2.4e-08 64.3 409 25.2
Cc01_g14320 Coffea canephora HOM05D003726 ORTHO05D003520 3.2e-08 63.9 424 28.3
Glyma.18G062100 Glycine max HOM05D003726 ORTHO05D003520 3.2e-08 63.9 444 23.9
DCAR_024016 Daucus carota HOM05D003726 ORTHO05D003520 4.2e-08 63.5 171 33.3
Duzib170G0773 Durio zibethinus HOM05D003726 ORTHO05D003520 5.4e-08 63.2 330 26.4
GSVIVG01011170001 Vitis vinifera HOM05D003726 ORTHO05D003520 5.4e-08 63.2 404 26.7
Glyma.18G202500 Glycine max HOM05D003726 ORTHO05D003520 7.1e-08 62.8 430 25.8
Nitab4.5_0002020g0040 Nicotiana tabacum HOM05D003726 ORTHO05D003520 1.2e-07 62.0 412 25.7
Rhsim13G0068300 Rhododendron simsii HOM05D003726 ORTHO05D003520 2.1e-07 61.2 358 26.0
Ca_14944_v3 Cicer arietinum L. HOM05D003726 ORTHO05D003520 2.7e-07 60.8 384 24.5
Sed0002259 Sechium edule HOM05D003726 ORTHO05D003520 2.7e-07 60.8 424 25.9
Thecc.05G014300 Theobroma cacao HOM05D003726 ORTHO05D003520 2.7e-07 60.8 414 27.3
FAN16G2238 Fragaria x ananassa HOM05D003726 ORTHO05D003520 3.5e-07 60.5 405 26.7
Lj1P136T16 Lonicera japonica HOM05D003726 ORTHO05D003520 3.5e-07 60.5 323 27.9
PSO339G6116 Papaver somniferum HOM05D003726 ORTHO05D003520 3.5e-07 60.5 427 21.8
Actinidia23884 Actinidia chinensis HOM05D003726 ORTHO05D003520 4.6e-07 60.1 422 25.4
ClCG03G000690 Citrullus lanatus HOM05D003726 ORTHO05D003520 6.0e-07 59.7 399 25.3
Lalb_Chr04g0252221 Lupinus albus HOM05D003726 ORTHO05D003520 6.0e-07 59.7 429 27.0
Lj6g0007419 Lotus japonicus HOM05D003726 ORTHO05D003520 7.8e-07 59.3 410 26.1
FAN21G3554 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.0e-06 58.9 402 26.1
CSS0035019 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 2.3e-06 57.8 405 24.0
CANSAT54G2733 Cannabis sativa HOM05D003726 ORTHO05D003520 2.3e-06 57.8 202 30.7
FAN25G1890 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.3e-06 57.8 405 26.2
Manes.09G107700 Manihot esculenta HOM05D003726 ORTHO05D003520 2.3e-06 57.8 419 24.3


User provided reference genes

Program Settings