Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 7.2e-63 243.8 129 100.0
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 2.0e-25 119.4 87 69.0
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 1.0e-24 117.1 118 56.8
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 2.3e-24 115.9 88 65.9
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 2.9e-24 115.5 100 63.0
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 5.0e-24 114.8 92 67.4
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 5.0e-24 114.8 106 61.3
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 5.0e-24 114.8 106 61.3
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 8.6e-24 114.0 131 51.9
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 1.1e-23 113.6 87 64.4
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 1.9e-23 112.8 87 63.2
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 2.5e-23 112.5 86 67.4
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 2.5e-23 112.5 87 63.2
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 3.3e-23 112.1 100 62.0
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 4.3e-23 111.7 100 62.0
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 4.3e-23 111.7 86 64.0
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 9.5e-23 110.5 111 60.4
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 1.2e-22 110.2 127 48.8
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 2.8e-22 109.0 111 54.1
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 2.8e-22 109.0 106 56.6
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 3.6e-22 108.6 124 50.0
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 4.7e-22 108.2 110 55.5
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 1.0e-21 107.1 89 64.0
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 1.4e-21 106.7 89 60.7
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 2.3e-21 105.9 88 60.2
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 4.0e-21 105.1 88 67.0
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 5.2e-21 104.8 86 65.1
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 5.2e-21 104.8 125 48.0
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 6.8e-21 104.4 79 64.6
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 6.8e-21 104.4 102 55.9
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 6.8e-21 104.4 86 65.1
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 8.9e-21 104.0 125 49.6
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 8.9e-21 104.0 86 65.1
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 8.9e-21 104.0 106 56.6
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 1.5e-20 103.2 122 50.8
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 1.5e-20 103.2 130 47.7
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 1.5e-20 103.2 88 59.1
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 2.0e-20 102.8 123 52.0
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 2.0e-20 102.8 88 58.0
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 2.0e-20 102.8 86 64.0
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 2.0e-20 102.8 120 53.3
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 2.0e-20 102.8 100 61.0
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 3.4e-20 102.1 90 62.2
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 4.4e-20 101.7 126 49.2
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 4.4e-20 101.7 113 51.3
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 4.4e-20 101.7 82 67.1
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 4.4e-20 101.7 132 52.3
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 4.4e-20 101.7 133 51.9
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 5.7e-20 101.3 125 48.0
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 7.5e-20 100.9 75 65.3
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 9.8e-20 100.5 86 65.1
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 2.2e-19 99.4 125 48.8
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 2.2e-19 99.4 125 48.8
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 4.9e-19 98.2 125 46.4
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 4.9e-19 98.2 91 57.1
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 6.4e-19 97.8 79 67.1
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 6.4e-19 97.8 98 56.1
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 6.4e-19 97.8 86 61.6
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 8.3e-19 97.4 106 53.8
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 8.3e-19 97.4 120 47.5
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 1.1e-18 97.1 64 75.0
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 1.1e-18 97.1 64 75.0
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 1.1e-18 97.1 64 75.0
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 1.1e-18 97.1 64 75.0
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 1.8e-18 96.3 66 71.2
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 2.4e-18 95.9 86 60.5
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 3.2e-18 95.5 107 54.2
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 4.1e-18 95.1 82 62.2
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 4.1e-18 95.1 82 62.2
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 5.4e-18 94.7 112 52.7
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 5.4e-18 94.7 68 66.2
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 5.4e-18 94.7 103 52.4
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 7.0e-18 94.4 124 46.0
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 7.0e-18 94.4 80 57.5
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 7.0e-18 94.4 134 46.3
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 9.2e-18 94.0 125 45.6
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 1.2e-17 93.6 122 50.8
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 1.6e-17 93.2 87 57.5
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 3.5e-17 92.0 175 37.1
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 7.8e-17 90.9 88 54.5
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 1.0e-16 90.5 71 67.6
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.3e-16 90.1 76 57.9
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 1.3e-16 90.1 77 59.7
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 2.3e-16 89.4 61 72.1
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 2.3e-16 89.4 60 76.7
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 3.9e-16 88.6 113 49.6
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 6.6e-16 87.8 118 45.8
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 2.5e-15 85.9 83 54.2
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 4.3e-15 85.1 67 65.7
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 1.6e-14 83.2 95 51.6
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 4.7e-14 81.6 59 71.2
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 4.0e-13 78.6 78 56.4
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 4.0e-13 78.6 77 54.5
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 1.1e-10 70.5 67 49.3
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 1.1e-10 70.5 76 51.3
Pp3c17_8360 Physcomitrium patens HOM05D007571 ORTHO05D009439 2.7e-09 65.9 80 46.2
Cre02.g086100 Chlamydomonas reinhardtii HOM05D007571 ORTHO05D009439 3.9e-08 62.0 72 44.4


User provided reference genes

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