Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1812 Ceratophyllum demersum HOM05D005968 ORTHO05D007158 1.0e-47 193.0 89 100.0
GSVIVG01023605001 Vitis vinifera HOM05D005968 ORTHO05D007158 3.2e-38 161.4 89 79.8
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 5.5e-38 160.6 89 78.7
Lalb_Chr12g0198701 Lupinus albus HOM05D005968 ORTHO05D007158 5.5e-38 160.6 89 78.7
TPR.G24874 Trifolium pratense HOM05D005968 ORTHO05D007158 9.4e-38 159.8 89 76.4
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 1.2e-37 159.5 89 76.4
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 1.6e-37 159.1 89 75.3
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 1.6e-37 159.1 89 76.4
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 3.6e-37 157.9 89 77.5
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 3.6e-37 157.9 89 78.7
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 6.1e-37 157.1 89 76.4
Medtr4g130840 Medicago truncatula HOM05D005968 ORTHO05D007158 6.1e-37 157.1 89 75.3
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 6.1e-37 157.1 89 76.4
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 8.0e-37 156.8 89 76.4
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 8.0e-37 156.8 89 76.4
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 1.0e-36 156.4 89 76.4
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 1.0e-36 156.4 89 76.4
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 1.4e-36 156.0 89 76.4
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 2.3e-36 155.2 89 76.4
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 3.0e-36 154.8 89 74.2
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 3.0e-36 154.8 89 75.3
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 3.9e-36 154.5 89 75.3
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 6.7e-36 153.7 89 74.2
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 8.8e-36 153.3 89 76.4
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 8.8e-36 153.3 89 76.4
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 1.1e-35 152.9 89 75.3
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 1.1e-35 152.9 89 71.9
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 1.1e-35 152.9 89 77.5
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 1.1e-35 152.9 89 73.0
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.5e-35 152.5 89 74.2
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 1.5e-35 152.5 89 73.0
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 1.5e-35 152.5 89 74.2
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 2.0e-35 152.1 89 75.3
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 2.0e-35 152.1 89 74.2
ClCG06G012410 Citrullus lanatus HOM05D005968 ORTHO05D007158 4.4e-35 151.0 89 73.0
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 4.4e-35 151.0 82 78.0
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 5.7e-35 150.6 89 75.3
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 5.7e-35 150.6 89 71.9
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 1.7e-34 149.1 89 74.2
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 2.2e-34 148.7 82 79.3
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 2.8e-34 148.3 89 71.9
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 2.8e-34 148.3 89 70.8
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 2.8e-34 148.3 89 73.0
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 3.7e-34 147.9 83 75.9
MELO3C010224.2 Cucumis melo HOM05D005968 ORTHO05D007158 3.7e-34 147.9 89 71.9
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 3.7e-34 147.9 89 69.7
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 3.7e-34 147.9 89 73.0
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 4.8e-34 147.5 108 63.9
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 6.3e-34 147.1 89 69.7
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 6.3e-34 147.1 89 69.7
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 6.3e-34 147.1 88 69.3
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 6.3e-34 147.1 89 73.0
RcHm_v2.0_Chr2g0085621 Rosa chinensis HOM05D005968 ORTHO05D007158 6.3e-34 147.1 89 71.9
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 8.2e-34 146.7 89 67.4
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 1.1e-33 146.4 89 68.5
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 1.4e-33 146.0 89 68.5
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 1.4e-33 146.0 89 68.5
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 1.4e-33 146.0 89 68.5
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 1.4e-33 146.0 89 71.9
Dinv43246 Davidia involucrata HOM05D005968 ORTHO05D007158 1.4e-33 146.0 89 71.9
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 1.4e-33 146.0 85 74.1
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 1.8e-33 145.6 89 70.8
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 2.4e-33 145.2 89 73.0
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 4.1e-33 144.4 85 72.9
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 4.1e-33 144.4 85 72.9
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 4.1e-33 144.4 89 69.7
Aa31LG2G19470 Aethionema arabicum HOM05D005968 ORTHO05D007158 5.3e-33 144.1 89 69.7
Cc06_g14960 Coffea canephora HOM05D005968 ORTHO05D007158 5.3e-33 144.1 89 69.7
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 5.3e-33 144.1 89 69.7
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 5.3e-33 144.1 89 68.5
Sopen07g001730 Solanum pennellii HOM05D005968 ORTHO05D007158 7.0e-33 143.7 89 68.5
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 7.0e-33 143.7 89 68.5
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 9.1e-33 143.3 89 67.4
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 9.1e-33 143.3 89 68.5
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 1.2e-32 142.9 89 67.4
Oeu038141.1 Olea europaea HOM05D005968 ORTHO05D007158 1.6e-32 142.5 89 70.8
Solyc07g005620.2 Solanum lycopersicum HOM05D005968 ORTHO05D007158 1.6e-32 142.5 89 67.4
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 2.0e-32 142.1 89 68.5
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 3.5e-32 141.4 89 66.3
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 5.9e-32 140.6 89 69.7
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 7.7e-32 140.2 89 66.3
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 1.1e-30 136.3 89 66.3
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 1.1e-30 136.3 89 66.3
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 1.5e-30 136.0 89 70.8
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 3.2e-30 134.8 93 66.7
HPP92_004698 Vanilla planifolia HOM05D005968 ORTHO05D007158 3.2e-30 134.8 90 68.9
Os05g0279600 Oryza sativa ssp. japonica HOM05D005968 ORTHO05D007158 5.5e-30 134.0 89 64.0
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 2.3e-28 128.6 73 75.3
Cpa.g.sc46.156 Carica papaya HOM05D005968 ORTHO05D007158 8.8e-28 126.7 109 56.9
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 1.3e-26 122.9 91 61.5
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 1.7e-26 122.5 88 59.1
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 3.7e-26 121.3 82 65.9
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 3.7e-26 121.3 133 45.9
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 4.1e-25 117.9 163 39.9
Eucgr.C02541 Eucalyptus grandis HOM05D005968 ORTHO05D007158 3.0e-20 101.7 71 63.4
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 2.7e-16 88.6 71 52.1
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 2.9e-15 85.1 49 75.5
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 3.8e-15 84.7 49 73.5
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 1.1e-14 83.2 59 64.4
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 7.2e-14 80.5 48 68.8
arahy.Tifrunner.gnm1.ann1.QXT71M Arachis hypogaea HOM05D005968 ORTHO05D007158 9.5e-14 80.1 46 73.9
TAR636G0142 Trochodendron aralioides HOM05D002374 ORTHO05D003594 2.8e-13 78.6 43 81.4
arahy.Tifrunner.gnm1.ann1.VCSM30 Arachis hypogaea HOM05D005968 ORTHO05D007158 1.4e-12 76.3 47 66.0
Lsat_1_v5_gn_4_18741 Lactuca sativa HOM05D005968 ORTHO05D007158 1.7e-10 69.3 45 66.7
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 2.2e-10 68.9 56 55.4
arahy.Tifrunner.gnm1.ann1.HGKJ8P Arachis hypogaea HOM05D005968 ORTHO05D007158 1.1e-09 66.6 40 67.5
Oeu038782.2 Olea europaea HOM05D005968 ORTHO05D007158 1.5e-06 56.2 62 48.4


User provided reference genes

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