Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1801 Ceratophyllum demersum HOM05D006727 ORTHO05D008408 5.1e-139 497.7 239 100.0
PGR004G2541 Punica granatum HOM05D006727 ORTHO05D008408 7.7e-87 324.3 195 76.9
Manes.09G116800 Manihot esculenta HOM05D006727 ORTHO05D008408 3.8e-86 322.0 182 79.7
GSVIVG01030200001 Vitis vinifera HOM05D006727 ORTHO05D008408 3.6e-84 315.5 182 76.9
Gorai.011G128700 Gossypium raimondii HOM05D006727 ORTHO05D008408 4.7e-84 315.1 186 74.7
Hund03725 Selenicereus undatus HOM05D006727 ORTHO05D008408 6.1e-84 314.7 181 76.2
Gohir.A10G149900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 8.0e-84 314.3 186 74.7
arahy.Tifrunner.gnm1.ann1.SP3HKJ Arachis hypogaea HOM05D006727 ORTHO05D008408 1.0e-83 313.9 168 82.1
arahy.Tifrunner.gnm1.ann1.U8U4T8 Arachis hypogaea HOM05D006727 ORTHO05D008408 1.4e-83 313.5 168 81.5
Dinv11373 Davidia involucrata HOM05D006727 ORTHO05D008408 1.8e-83 313.2 181 78.5
Gohir.D10G116900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 2.3e-83 312.8 186 74.2
Cfa017053 Carpinus fangiana HOM05D006727 ORTHO05D008408 3.0e-83 312.4 183 77.6
TAR220G0001 Trochodendron aralioides HOM05D006727 ORTHO05D008408 4.0e-83 312.0 196 74.5
COL.COLO4_16540 Corchorus olitorius HOM05D006727 ORTHO05D008408 8.9e-83 310.8 171 77.8
Thecc.04G153700 Theobroma cacao HOM05D006727 ORTHO05D008408 8.9e-83 310.8 168 80.4
TWI53G1665 Tripterygium wilfordii HOM05D006727 ORTHO05D008408 1.2e-82 310.5 188 73.4
Lj1g0012647 Lotus japonicus HOM05D006727 ORTHO05D008408 2.6e-82 309.3 171 78.9
Prupe.6G291700 Prunus persica HOM05D006727 ORTHO05D008408 2.6e-82 309.3 187 73.8
QL07p032522 Quercus lobata HOM05D006727 ORTHO05D008408 2.6e-82 309.3 182 76.9
CSS0002185 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 3.4e-82 308.9 183 75.4
Dinv25328 Davidia involucrata HOM05D006727 ORTHO05D008408 3.4e-82 308.9 181 77.9
Glyma.18G215000 Glycine max HOM05D006727 ORTHO05D008408 4.4e-82 308.5 186 75.8
Aqoxy4G02378 Aquilegia oxysepala HOM05D006727 ORTHO05D008408 5.7e-82 308.1 183 76.5
Lalb_Chr19g0124021 Lupinus albus HOM05D006727 ORTHO05D008408 5.7e-82 308.1 187 72.7
PSO017G7044 Papaver somniferum HOM05D006727 ORTHO05D008408 5.7e-82 308.1 182 75.8
Peaxi162Scf00732g00434 Petunia axillaris HOM05D006727 ORTHO05D008408 5.7e-82 308.1 183 74.3
Duzib212G0227 Durio zibethinus HOM05D006727 ORTHO05D008408 7.5e-82 307.8 183 73.8
FAN02G0358 Fragaria x ananassa HOM05D006727 ORTHO05D008408 9.8e-82 307.4 168 80.4
Nitab4.5_0000950g0010 Nicotiana tabacum HOM05D006727 ORTHO05D008408 9.8e-82 307.4 183 74.3
MD12G1186200 Malus domestica HOM05D006727 ORTHO05D008408 1.3e-81 307.0 176 77.8
Atru.chr8.2386 Acer truncatum HOM05D006727 ORTHO05D008408 1.7e-81 306.6 188 71.8
Glyma.09G276200 Glycine max HOM05D006727 ORTHO05D008408 1.7e-81 306.6 171 80.1
Potri.016G134700 Populus trichocarpa HOM05D006727 ORTHO05D008408 1.7e-81 306.6 177 75.7
CSS0012941 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 2.2e-81 306.2 183 74.3
CiPaw.09G219900 Carya illinoinensis HOM05D006727 ORTHO05D008408 4.9e-81 305.1 176 77.3
RcHm_v2.0_Chr3g0460801 Rosa chinensis HOM05D006727 ORTHO05D008408 4.9e-81 305.1 187 73.3
CANSAT35G0523 Cannabis sativa HOM05D006727 ORTHO05D008408 1.8e-80 303.1 168 80.4
MD04G1172900 Malus domestica HOM05D006727 ORTHO05D008408 1.8e-80 303.1 183 73.8
Medtr7g072680 Medicago truncatula HOM05D006727 ORTHO05D008408 1.8e-80 303.1 172 78.5
FAN05G4632 Fragaria x ananassa HOM05D006727 ORTHO05D008408 2.4e-80 302.8 172 78.5
FAN14G1566 Fragaria x ananassa HOM05D006727 ORTHO05D008408 3.1e-80 302.4 187 72.2
Phvul.008G083900 Phaseolus vulgaris HOM05D006727 ORTHO05D008408 3.1e-80 302.4 194 72.7
HPP92_001138 Vanilla planifolia HOM05D006727 ORTHO05D008408 4.1e-80 302.0 183 72.1
FAN05G1856 Fragaria x ananassa HOM05D006727 ORTHO05D008408 1.2e-79 300.4 172 77.9
Cc06_g00470 Coffea canephora HOM05D006727 ORTHO05D008408 1.6e-79 300.1 168 78.6
CsaV3_3G033190 Cucumis sativus L. HOM05D006727 ORTHO05D008408 1.6e-79 300.1 177 75.1
TPR.G26930 Trifolium pratense HOM05D006727 ORTHO05D008408 1.6e-79 300.1 172 76.2
MELO3C009112.2 Cucumis melo HOM05D006727 ORTHO05D008408 2.0e-79 299.7 177 75.7
Psat3g120440 Pisum sativum HOM05D006727 ORTHO05D008408 2.0e-79 299.7 172 77.3
FvH4_6g10100 Fragaria vesca HOM05D006727 ORTHO05D008408 3.5e-79 298.9 187 71.7
Rhsim05G0229700 Rhododendron simsii HOM05D006727 ORTHO05D008408 3.5e-79 298.9 182 75.3
EL10Ac7g17073 Beta vulgaris HOM05D006727 ORTHO05D008408 1.0e-78 297.4 177 75.1
HanXRQChr01g0000191 Helianthus annuus HOM05D006727 ORTHO05D008408 1.0e-78 297.4 182 74.2
Sed0012883 Sechium edule HOM05D006727 ORTHO05D008408 1.0e-78 297.4 177 75.1
ECA248G2137 Erigeron canadensis HOM05D006727 ORTHO05D008408 1.3e-78 297.0 170 78.8
Lsat_1_v5_gn_5_150061 Lactuca sativa HOM05D006727 ORTHO05D008408 3.8e-78 295.4 197 70.1
THA.LOC104823356 Tarenaya hassleriana HOM05D006727 ORTHO05D008408 5.0e-78 295.0 168 78.0
Migut.J00054 Erythranthe guttata HOM05D006727 ORTHO05D008408 1.5e-77 293.5 168 76.2
Sabra04G0152100 Salix brachista HOM05D006727 ORTHO05D008408 9.5e-77 290.8 198 66.2
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 2.1e-76 289.7 184 67.9
Ciclev10012697m.g Citrus clementina HOM05D006727 ORTHO05D008408 2.1e-76 289.7 177 73.4
Eucgr.K01278 Eucalyptus grandis HOM05D006727 ORTHO05D008408 2.8e-76 289.3 183 68.9
Nn2g10333 Nelumbo nucifera HOM05D006727 ORTHO05D008408 2.8e-76 289.3 167 75.4
Sc19g0002650 Simmondsia chinensis HOM05D006727 ORTHO05D008408 2.8e-76 289.3 177 71.2
MSTRG.18948 Avicennia marina HOM05D006727 ORTHO05D008408 6.1e-76 288.1 190 69.5
Zm00001eb281990 Zea mays HOM05D006727 ORTHO05D008408 6.1e-76 288.1 179 70.4
SGA_v2.0_scaffold373G50173 Striga asiatica HOM05D006727 ORTHO05D008408 3.0e-75 285.8 186 69.9
Os05g0168400 Oryza sativa ssp. japonica HOM05D006727 ORTHO05D008408 2.9e-73 279.3 174 69.5
AT3G51610 Arabidopsis thaliana HOM05D006727 ORTHO05D008408 3.7e-73 278.9 168 74.4
Carub.0005s1797 Capsella rubella HOM05D006727 ORTHO05D008408 3.7e-73 278.9 176 71.0
AL5G32050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 4.9e-73 278.5 176 71.0
CARHR161200 Cardamine hirsuta HOM05D006727 ORTHO05D008408 8.3e-73 277.7 176 71.0
Aa31sc296G30 Aethionema arabicum HOM05D006727 ORTHO05D008408 3.2e-72 275.8 176 70.5
BcaC09g50100 Brassica carinata HOM05D006727 ORTHO05D008408 5.4e-72 275.0 168 73.2
BcaNung00375 Brassica carinata HOM05D006727 ORTHO05D008408 5.4e-72 275.0 168 73.2
C01p28960 Brassica napus HOM05D006727 ORTHO05D008408 5.4e-72 275.0 168 73.2
BolC1t02827H Brassica oleracea HOM05D006727 ORTHO05D008408 5.4e-72 275.0 168 73.2
Haze_21159 Corylus avellana HOM05D006727 ORTHO05D008408 1.6e-71 273.5 148 81.8
Oeu026955.4 Olea europaea HOM05D006727 ORTHO05D008408 2.0e-71 273.1 238 57.1
Thhalv10010694m.g Eutrema salsugineum HOM05D006727 ORTHO05D008408 4.6e-71 271.9 176 70.5
A01p23320 Brassica napus HOM05D006727 ORTHO05D008408 5.0e-70 268.5 171 71.3
BraA01t02241Z Brassica rapa HOM05D006727 ORTHO05D008408 5.0e-70 268.5 171 71.3
unitig_749.g14090 Utricularia gibba HOM05D006727 ORTHO05D008408 7.3e-69 264.6 155 72.3
PSO170G4157 Papaver somniferum HOM05D006727 ORTHO05D008408 9.5e-69 264.2 148 78.4
vmacro20362 Vaccinium macrocarpon HOM05D006727 ORTHO05D008408 1.1e-67 260.8 190 66.3
FAN09G3050 Fragaria x ananassa HOM05D006727 ORTHO05D008408 4.1e-64 248.8 144 75.7
Ah.15g090120 Amaranthus hybridus HOM05D006727 ORTHO05D008408 7.0e-64 248.1 193 62.2
CAN.G119.2 Capsicum annuum HOM05D006727 ORTHO05D008408 7.0e-64 248.1 150 72.0
Sp5g10660 Schrenkiella parvula HOM05D006727 ORTHO05D008408 1.1e-61 240.7 149 71.8
Mapoly0003s0079 Marchantia polymorpha HOM05D006727 ORTHO05D008408 1.5e-61 240.4 170 60.6
SMO356G0277 Selaginella moellendorffii HOM05D006727 ORTHO05D008408 6.2e-60 235.0 179 56.4
Actinidia20787 Actinidia chinensis HOM05D006727 ORTHO05D008408 2.9e-57 226.1 130 80.0
TAR623G1271 Trochodendron aralioides HOM05D006727 ORTHO05D008408 3.2e-56 222.6 178 64.0
Ca_07756_v3 Cicer arietinum L. HOM05D006727 ORTHO05D008408 2.8e-52 209.5 127 74.8
Pp3c2_32200 Physcomitrium patens HOM05D006727 ORTHO05D008408 8.9e-51 204.5 183 50.3
ClCG10G022640 Citrullus lanatus HOM05D006727 ORTHO05D008408 1.4e-48 197.2 121 72.7
Nitab4.5_0000330g0040 Nicotiana tabacum HOM05D006727 ORTHO05D008408 2.3e-46 189.9 110 74.5
AUR62006372 Chenopodium quinoa HOM05D006727 ORTHO05D008408 3.9e-46 189.1 177 50.8
SHI12925 Sapria himalayana HOM05D006727 ORTHO05D008408 1.9e-45 186.8 133 63.2
AagrBONN_evm.TU.Sc2ySwM_344.2624 Anthoceros agrestis HOM05D006727 ORTHO05D008408 2.4e-43 179.9 153 51.6
Oeu060435.2 Olea europaea HOM05D006727 ORTHO05D008408 9.3e-40 167.9 89 80.9
Cre01.g049450 Chlamydomonas reinhardtii HOM05D006727 ORTHO05D008408 9.9e-34 147.9 173 37.6
Sopen03g037430 Solanum pennellii HOM05D006727 ORTHO05D008408 1.1e-32 144.4 85 75.3
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 1.9e-32 143.7 165 35.8
AagrBONN_evm.TU.Sc2ySwM_344.2622 Anthoceros agrestis HOM05D006727 ORTHO05D008408 7.1e-32 141.7 105 59.0
MCO09G625 Micromonas commoda HOM05D006727 ORTHO05D008408 2.8e-28 129.8 153 36.6
BraA09t39934Z Brassica rapa HOM05D006727 ORTHO05D008408 8.1e-28 128.3 119 56.3
A09p44730 Brassica napus HOM05D006727 ORTHO05D008408 6.9e-27 125.2 119 54.6
Solyc03g118520.4 Solanum lycopersicum HOM05D006727 ORTHO05D008408 2.9e-25 119.8 78 69.2
Sopen03g037400 Solanum pennellii HOM05D006727 ORTHO05D008408 1.2e-23 114.4 73 68.5
PSO017G2966 Papaver somniferum HOM05D004863 ORTHO05D005802 3.5e-23 112.8 72 69.4
SEGI_08771 Sequoiadendron giganteum HOM05D006727 ORTHO05D008408 1.0e-22 111.3 73 64.4
AL1G25050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 1.9e-16 90.5 51 74.5
AL8G15680 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 1.9e-16 90.5 51 74.5
CBR_g50885 Chara braunii HOM05D006727 ORTHO05D008408 8.7e-14 81.6 107 34.6
BolC8t50296H Brassica oleracea HOM05D006727 ORTHO05D008408 3.4e-10 69.7 63 54.0
MD12G1088300 Malus domestica HOM05D006727 ORTHO05D008408 4.2e-08 62.8 56 57.1
A03p48380 Brassica napus HOM05D023373 ORTHO05D024557 3.9e-06 56.2 93 40.9


User provided reference genes

Program Settings