Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1800 Ceratophyllum demersum HOM05D006243 ORTHO05D007688 4.3e-232 807.7 443 100.0
TAR629G1693 Trochodendron aralioides HOM05D006243 ORTHO05D007688 7.3e-115 418.3 461 60.1
GSVIVG01030779001 Vitis vinifera HOM05D006243 ORTHO05D007688 7.3e-115 418.3 453 60.3
Nn4g24254 Nelumbo nucifera HOM05D006243 ORTHO05D007688 7.8e-109 398.3 452 59.7
Prupe.3G161300 Prunus persica HOM05D006243 ORTHO05D007688 7.8e-109 398.3 461 57.9
MD09G1263800 Malus domestica HOM05D006243 ORTHO05D007688 1.7e-108 397.1 458 58.1
CSS0038083 Camellia sinensis var. sinensis HOM05D006243 ORTHO05D007688 2.5e-107 393.3 321 73.2
Cfa007817 Carpinus fangiana HOM05D006243 ORTHO05D007688 4.3e-107 392.5 458 57.9
Ciclev10011587m.g Citrus clementina HOM05D006243 ORTHO05D007688 4.3e-107 392.5 462 57.8
Manes.01G117900 Manihot esculenta HOM05D006243 ORTHO05D007688 9.6e-107 391.3 392 64.5
CiPaw.03G071500 Carya illinoinensis HOM05D006243 ORTHO05D007688 1.6e-106 390.6 367 66.5
MD17G1259100 Malus domestica HOM05D006243 ORTHO05D007688 2.1e-106 390.2 374 65.2
Actinidia06497 Actinidia chinensis HOM05D006243 ORTHO05D007688 2.8e-106 389.8 361 67.0
Aqoxy3G00051 Aquilegia oxysepala HOM05D006243 ORTHO05D007688 2.8e-106 389.8 381 65.1
Haze_14258 Corylus avellana HOM05D006243 ORTHO05D007688 3.6e-106 389.4 460 57.4
ATR0317G069 Amborella trichopoda HOM05D006243 ORTHO05D007688 2.4e-105 386.7 331 69.2
Potri.017G129100 Populus trichocarpa HOM05D006243 ORTHO05D007688 2.4e-105 386.7 458 56.3
CANSAT64G2718 Cannabis sativa HOM05D006243 ORTHO05D007688 3.1e-105 386.3 396 61.9
Os05g0148700 Oryza sativa ssp. japonica HOM05D006243 ORTHO05D007688 3.1e-105 386.3 445 56.6
Sabra17G0107600 Salix brachista HOM05D006243 ORTHO05D007688 5.2e-105 385.6 378 63.5
Rhsim10G0177000 Rhododendron simsii HOM05D006243 ORTHO05D007688 6.8e-105 385.2 368 66.8
Thecc.04G115200 Theobroma cacao HOM05D006243 ORTHO05D007688 8.9e-105 384.8 378 65.9
ClCG05G011500 Citrullus lanatus HOM05D006243 ORTHO05D007688 1.5e-104 384.0 374 64.7
Gohir.A07G078300 Gossypium hirsutum HOM05D006243 ORTHO05D007688 1.5e-104 384.0 373 66.2
Cc07_g13520 Coffea canephora HOM05D006243 ORTHO05D007688 2.0e-104 383.6 421 60.1
RcHm_v2.0_Chr3g0493131 Rosa chinensis HOM05D006243 ORTHO05D007688 2.0e-104 383.6 375 65.6
FAN28G0309 Fragaria x ananassa HOM05D006243 ORTHO05D007688 7.6e-104 381.7 450 58.0
Gorai.001G088700 Gossypium raimondii HOM05D006243 ORTHO05D007688 9.9e-104 381.3 372 65.9
TWI53G0799 Tripterygium wilfordii HOM05D006243 ORTHO05D007688 9.9e-104 381.3 453 56.1
Cpa.g.sc67.47 Carica papaya HOM05D006243 ORTHO05D007688 1.3e-103 380.9 380 63.7
FAN19G0552 Fragaria x ananassa HOM05D006243 ORTHO05D007688 1.7e-103 380.6 450 57.8
Atru.chr1.1900 Acer truncatum HOM05D006243 ORTHO05D007688 2.9e-103 379.8 455 58.7
Lalb_Chr10g0104381 Lupinus albus HOM05D006243 ORTHO05D007688 2.9e-103 379.8 374 63.4
Zm00001eb165460 Zea mays HOM05D006243 ORTHO05D007688 3.8e-103 379.4 407 60.0
Eucgr.J01597 Eucalyptus grandis HOM05D006243 ORTHO05D007688 4.9e-103 379.0 381 62.7
CsaV3_3G020810 Cucumis sativus L. HOM05D006243 ORTHO05D007688 1.9e-102 377.1 412 59.2
FvH4_1g28740 Fragaria vesca HOM05D006243 ORTHO05D007688 1.9e-102 377.1 450 57.6
EL10Ac2g03168 Beta vulgaris HOM05D006243 ORTHO05D007688 2.4e-102 376.7 356 66.9
HanXRQChr13g0418351 Helianthus annuus HOM05D006243 ORTHO05D007688 2.4e-102 376.7 323 69.7
Gohir.D07G083100 Gossypium hirsutum HOM05D006243 ORTHO05D007688 3.2e-102 376.3 372 65.1
FAN26G0580 Fragaria x ananassa HOM05D006243 ORTHO05D007688 5.4e-102 375.6 450 57.1
Lj4A263G87 Lonicera japonica HOM05D006243 ORTHO05D007688 7.1e-102 375.2 323 70.3
ECA246G3278 Erigeron canadensis HOM05D006243 ORTHO05D007688 1.6e-101 374.0 314 71.0
Duzib133G1335 Durio zibethinus HOM05D006243 ORTHO05D007688 2.1e-101 373.6 374 65.0
MELO3C020192.2 Cucumis melo HOM05D006243 ORTHO05D007688 1.3e-100 370.9 374 63.4
DCAR_014173 Daucus carota HOM05D006243 ORTHO05D007688 1.7e-100 370.5 374 62.3
arahy.Tifrunner.gnm1.ann1.Y3W4B5 Arachis hypogaea HOM05D006243 ORTHO05D007688 3.9e-100 369.4 323 70.0
Peaxi162Scf00305g00613 Petunia axillaris HOM05D006243 ORTHO05D007688 6.6e-100 368.6 415 58.1
PSO478G0940 Papaver somniferum HOM05D006243 ORTHO05D007688 3.3e-99 366.3 453 57.0
AUR62038703 Chenopodium quinoa HOM05D006243 ORTHO05D007688 5.6e-99 365.5 363 62.8
Lsat_1_v5_gn_3_64500 Lactuca sativa HOM05D006243 ORTHO05D007688 5.6e-99 365.5 399 56.9
Solyc11g011170.2 Solanum lycopersicum HOM05D006243 ORTHO05D007688 7.3e-99 365.2 398 59.0
Sc10g0004760 Simmondsia chinensis HOM05D006243 ORTHO05D007688 1.3e-98 364.4 377 61.8
PSO017G3733 Papaver somniferum HOM05D006243 ORTHO05D007688 2.1e-98 363.6 458 55.2
SalBow3G2874 Salvia bowleyana HOM05D006243 ORTHO05D007688 3.6e-98 362.8 334 68.3
CAN.G222.23 Capsicum annuum HOM05D006243 ORTHO05D007688 4.8e-98 362.5 396 59.8
Oeu012257.1 Olea europaea HOM05D006243 ORTHO05D007688 4.8e-98 362.5 320 70.3
Sopen11g005930 Solanum pennellii HOM05D006243 ORTHO05D007688 4.8e-98 362.5 398 58.5
vmacro07692 Vaccinium macrocarpon HOM05D006243 ORTHO05D007688 8.1e-98 361.7 397 57.7
MSTRG.23392 Avicennia marina HOM05D006243 ORTHO05D007688 1.1e-97 361.3 384 60.2
THA.LOC104805617 Tarenaya hassleriana HOM05D006243 ORTHO05D007688 1.4e-97 360.9 336 66.4
AUR62018213 Chenopodium quinoa HOM05D006243 ORTHO05D007688 1.8e-97 360.5 365 62.2
Oeu032326.2 Olea europaea HOM05D006243 ORTHO05D007688 1.8e-97 360.5 398 59.8
PGSC0003DMG402015686 Solanum tuberosum HOM05D006243 ORTHO05D007688 5.3e-97 359.0 412 56.6
CARHR058210 Cardamine hirsuta HOM05D006243 ORTHO05D007688 1.5e-96 357.5 441 55.8
Migut.H02264 Erythranthe guttata HOM05D006243 ORTHO05D007688 2.0e-96 357.1 319 68.3
Carub.0002s1234 Capsella rubella HOM05D006243 ORTHO05D007688 7.6e-96 355.1 324 69.1
Aa31LG2G3000 Aethionema arabicum HOM05D006243 ORTHO05D007688 9.9e-96 354.8 338 66.3
AT1G66330 Arabidopsis thaliana HOM05D006243 ORTHO05D007688 1.3e-95 354.4 326 69.3
AL2G24050 Arabidopsis lyrata HOM05D006243 ORTHO05D007688 3.8e-95 352.8 322 70.2
BcaB03g15275 Brassica carinata HOM05D006243 ORTHO05D007688 3.8e-95 352.8 337 68.5
BcaB05g24167 Brassica carinata HOM05D006243 ORTHO05D007688 3.8e-95 352.8 354 64.1
Sp5g21350 Schrenkiella parvula HOM05D006243 ORTHO05D007688 3.8e-95 352.8 325 68.9
BraA02t06418Z Brassica rapa HOM05D006243 ORTHO05D007688 6.4e-95 352.1 442 56.1
LjContig00141g0011202 Lotus japonicus HOM05D006243 ORTHO05D007688 1.4e-94 350.9 461 53.6
BcaC03g14742 Brassica carinata HOM05D006243 ORTHO05D007688 2.4e-94 350.1 355 64.8
BolC2t08324H Brassica oleracea HOM05D006243 ORTHO05D007688 2.4e-94 350.1 355 64.8
Glyma.02G245300 Glycine max HOM05D006243 ORTHO05D007688 3.2e-94 349.7 448 53.1
COL.COLO4_10159 Corchorus olitorius HOM05D006243 ORTHO05D007688 5.4e-94 349.0 320 68.1
BraA07t30960Z Brassica rapa HOM05D006243 ORTHO05D007688 6.0e-93 345.5 347 66.0
Medtr5g078290 Medicago truncatula HOM05D006243 ORTHO05D007688 6.0e-93 345.5 384 59.1
BcaC08g46068 Brassica carinata HOM05D006243 ORTHO05D007688 1.0e-92 344.7 312 70.8
HPP92_027416 Vanilla planifolia HOM05D006243 ORTHO05D007688 1.0e-92 344.7 388 58.2
SEGI_26344 Sequoiadendron giganteum HOM05D006243 ORTHO05D007688 3.0e-92 343.2 322 64.3
A07p33290 Brassica napus HOM05D006243 ORTHO05D007688 1.5e-91 340.9 348 65.8
C06p39620 Brassica napus HOM05D006243 ORTHO05D007688 2.5e-91 340.1 313 70.6
BolC6t39055H Brassica oleracea HOM05D006243 ORTHO05D007688 2.5e-91 340.1 313 70.6
Phvul.008G235800 Phaseolus vulgaris HOM05D006243 ORTHO05D007688 3.3e-91 339.7 446 53.6
Lalb_Chr17g0346141 Lupinus albus HOM05D006243 ORTHO05D007688 2.8e-90 336.7 378 59.0
C02p21930 Brassica napus HOM05D006243 ORTHO05D007688 3.6e-90 336.3 298 70.5
A02p13590 Brassica napus HOM05D006243 ORTHO05D007688 6.2e-90 335.5 419 56.1
PGR004G2672 Punica granatum HOM05D006243 ORTHO05D007688 6.9e-89 332.0 327 64.2
TPR.G8275 Trifolium pratense HOM05D006243 ORTHO05D007688 1.2e-88 331.3 300 61.0
Hund13108 Selenicereus undatus HOM05D006243 ORTHO05D007688 5.4e-86 322.4 253 68.8
arahy.Tifrunner.gnm1.ann1.SFD8TD Arachis hypogaea HOM05D006243 ORTHO05D007688 3.0e-84 316.6 313 64.5
Nitab4.5_0000201g0240 Nicotiana tabacum HOM05D006243 ORTHO05D007688 2.8e-82 310.1 408 53.4
unitig_736.g22596 Utricularia gibba HOM05D006243 ORTHO05D007688 1.5e-80 304.3 243 66.3
Glyma.14G215400 Glycine max HOM05D006243 ORTHO05D007688 5.1e-76 289.3 408 52.5
SGA_v2.0_scaffold108G30955 Striga asiatica HOM05D006243 ORTHO05D007688 2.8e-74 283.5 377 53.8
Sed0013436 Sechium edule HOM05D006243 ORTHO05D007688 4.8e-74 282.7 383 52.5
Ca_05826_v3 Cicer arietinum L. HOM05D006243 ORTHO05D007688 5.3e-73 279.3 451 48.3
Nitab4.5_0009518g0020 Nicotiana tabacum HOM05D006243 ORTHO05D007688 7.1e-70 268.9 408 49.5
Thhalv10018612m.g Eutrema salsugineum HOM05D006243 ORTHO05D007688 2.4e-65 253.8 371 52.0
Actinidia17213 Actinidia chinensis HOM05D006243 ORTHO05D007688 9.0e-65 251.9 191 70.7
Ah.10g032360 Amaranthus hybridus HOM05D006243 ORTHO05D007688 5.7e-59 232.6 154 78.6
MD17G1258600 Malus domestica HOM05D006243 ORTHO05D007688 5.3e-57 226.1 226 59.3
Mapoly0055s0114 Marchantia polymorpha HOM05D006243 ORTHO05D007688 5.5e-54 216.1 325 47.1
AagrBONN_evm.TU.Sc2ySwM_117.2468 Anthoceros agrestis HOM05D006243 ORTHO05D007688 2.7e-53 213.8 243 47.3
Pp3c5_8230 Physcomitrium patens HOM05D006243 ORTHO05D007688 1.1e-51 208.4 315 48.9
Pp3c16_1710 Physcomitrium patens HOM05D006243 ORTHO05D007688 3.3e-51 206.8 257 47.9
Pp3c25_7980 Physcomitrium patens HOM05D006243 ORTHO05D007688 8.2e-50 202.2 246 47.2
Psat2g047960 Pisum sativum HOM05D006243 ORTHO05D007688 7.7e-48 195.7 222 62.2
VMungo0647G1521 Vigna mungo HOM05D006243 ORTHO05D007688 1.9e-46 191.0 131 77.1
Dinv28209 Davidia involucrata HOM05D006243 ORTHO05D007688 4.8e-42 176.4 279 51.6
Lsat_1_v5_gn_2_20381 Lactuca sativa HOM05D006243 ORTHO05D007688 1.8e-36 157.9 120 69.2
SMO238G0021 Selaginella moellendorffii HOM05D006243 ORTHO05D007688 3.0e-36 157.1 267 36.7
VMungo0647G1427 Vigna mungo HOM05D006243 ORTHO05D007688 1.3e-34 151.8 334 43.1
CBR_g27960 Chara braunii HOM05D006243 ORTHO05D007688 4.2e-30 136.7 208 38.9
RcHm_v2.0_Chr7g0216651 Rosa chinensis HOM05D006243 ORTHO05D007688 3.0e-28 130.6 77 87.0
QL02p058075 Quercus lobata HOM05D006243 ORTHO05D007688 3.6e-21 107.1 235 45.1
Actinidia17214 Actinidia chinensis HOM05D006243 ORTHO05D007688 2.6e-19 100.9 142 55.6
Lsat_1_v5_gn_9_50281 Lactuca sativa HOM05D006243 ORTHO05D007688 9.2e-17 92.4 60 76.7
Lsat_1_v5_gn_9_64341 Lactuca sativa HOM05D000326 ORTHO05D000312 1.4e-09 68.6 101 46.5


User provided reference genes

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