Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1765 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 1.3e-127 459.9 254 100.0
CDE07G1740 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 3.9e-105 385.2 281 79.0
MBI05_g37047_MAGBIO Magnolia biondii HOM05D003628 ORTHO05D004253 8.7e-12 75.1 262 30.9
Dinv27142 Davidia involucrata HOM05D003628 ORTHO05D004253 1.6e-10 70.9 98 52.0
Sc19g0002160 Simmondsia chinensis HOM05D003628 ORTHO05D004253 1.8e-09 67.4 70 60.0
Lalb_Chr03g0036821 Lupinus albus HOM05D003628 ORTHO05D004253 2.0e-08 63.9 197 32.5
Hma1.2p1_1241F.1_g269760 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 2.6e-08 63.5 220 32.7
arahy.Tifrunner.gnm1.ann1.STBA65 Arachis hypogaea HOM05D003628 ORTHO05D004253 4.5e-08 62.8 264 30.7
HPP92_026453 Vanilla planifolia HOM05D003628 ORTHO05D004253 7.6e-08 62.0 60 58.3
Sed0002438 Sechium edule HOM05D003628 ORTHO05D004253 9.9e-08 61.6 255 31.8
TAR362G1171 Trochodendron aralioides HOM05D003628 ORTHO05D004253 9.9e-08 61.6 135 37.8
Duzib212G0614 Durio zibethinus HOM05D003628 ORTHO05D004253 2.2e-07 60.5 70 57.1
TAR633G2428 Trochodendron aralioides HOM05D003628 ORTHO05D004253 2.2e-07 60.5 99 43.4
HPP92_014197 Vanilla planifolia HOM05D003628 ORTHO05D004253 2.2e-07 60.5 75 49.3
ClCG06G007410 Citrullus lanatus HOM05D003628 ORTHO05D004253 2.9e-07 60.1 170 35.9
Eucgr.H00111 Eucalyptus grandis HOM05D003628 ORTHO05D004253 2.9e-07 60.1 179 35.2
Glyma.10G128300 Glycine max HOM05D003628 ORTHO05D004253 2.9e-07 60.1 263 28.1
Glyma.20G079600 Glycine max HOM05D003628 ORTHO05D004253 2.9e-07 60.1 262 27.5
Lj6A641G44 Lonicera japonica HOM05D003628 ORTHO05D004253 4.9e-07 59.3 159 39.0
Ciclev10004333m.g Citrus clementina HOM05D003628 ORTHO05D004253 6.4e-07 58.9 222 32.0
CANSAT78G2050 Cannabis sativa HOM05D003628 ORTHO05D004253 8.4e-07 58.5 126 38.9
Atru.chr4.1847 Acer truncatum HOM05D003628 ORTHO05D004253 1.4e-06 57.8 138 39.1
Potri.008G174800 Populus trichocarpa HOM05D003628 ORTHO05D004253 1.9e-06 57.4 249 28.5
Gohir.A02G025400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.2e-06 56.6 209 30.6
Gorai.005G036000 Gossypium raimondii HOM05D003628 ORTHO05D004253 4.2e-06 56.2 234 28.6
Manes.15G048200 Manihot esculenta HOM05D003628 ORTHO05D004253 4.2e-06 56.2 252 29.0
RcHm_v2.0_Chr4g0396341 Rosa chinensis HOM05D003628 ORTHO05D004253 4.2e-06 56.2 134 38.8
CsaV3_2G012280 Cucumis sativus L. HOM05D003628 ORTHO05D004253 5.5e-06 55.8 251 29.1
Gorai.011G164000 Gossypium raimondii HOM05D003628 ORTHO05D004253 5.5e-06 55.8 128 42.2
Sed0008500 Sechium edule HOM05D003628 ORTHO05D004253 5.5e-06 55.8 239 29.7
Phvul.007G238700 Phaseolus vulgaris HOM05D003628 ORTHO05D004253 7.1e-06 55.5 166 31.3


User provided reference genes

Program Settings