Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1759 Ceratophyllum demersum HOM05D004529 ORTHO05D005884 5.7e-84 314.3 170 100.0
CDE08G0908 Ceratophyllum demersum HOM05D004529 ORTHO05D005884 9.4e-71 270.4 158 93.7
MBI06_g11152_MAGBIO Magnolia biondii HOM05D004529 ORTHO05D005884 3.3e-39 165.6 170 50.0
Sabra04G0046400 Salix brachista HOM05D004529 ORTHO05D005884 7.3e-39 164.5 164 52.4
Dinv06405 Davidia involucrata HOM05D004529 ORTHO05D005884 9.5e-39 164.1 161 52.8
Dinv11730 Davidia involucrata HOM05D004529 ORTHO05D005884 2.8e-38 162.5 162 53.1
MBI03_g26653_MAGBIO Magnolia biondii HOM05D004529 ORTHO05D005884 1.1e-37 160.6 163 53.4
Duzib177G0816 Durio zibethinus HOM05D004529 ORTHO05D005884 1.4e-37 160.2 162 51.2
Actinidia34683 Actinidia chinensis HOM05D004529 ORTHO05D005884 5.2e-37 158.3 160 53.8
Potri.004G068700 Populus trichocarpa HOM05D004529 ORTHO05D005884 5.2e-37 158.3 164 50.6
TWI81G0141 Tripterygium wilfordii HOM05D004529 ORTHO05D005884 1.5e-36 156.8 165 50.9
Gohir.A13G153800 Gossypium hirsutum HOM05D004529 ORTHO05D005884 1.7e-35 153.3 172 45.3
Thecc.05G197800 Theobroma cacao HOM05D004529 ORTHO05D005884 1.7e-35 153.3 167 47.3
CDE05G3012 Ceratophyllum demersum HOM05D004529 ORTHO05D005884 2.2e-35 152.9 163 50.9
Atru.chr9.71 Acer truncatum HOM05D004529 ORTHO05D005884 8.3e-35 151.0 163 49.1
Haze_18337 Corylus avellana HOM05D004529 ORTHO05D005884 1.4e-34 150.2 166 50.0
TAR629G0199 Trochodendron aralioides HOM05D004529 ORTHO05D005884 1.4e-34 150.2 162 52.5
Gohir.D13G158400 Gossypium hirsutum HOM05D004529 ORTHO05D005884 1.9e-34 149.8 172 45.3
Gorai.013G179100 Gossypium raimondii HOM05D004529 ORTHO05D005884 1.9e-34 149.8 172 45.3
TAR629G2105 Trochodendron aralioides HOM05D004529 ORTHO05D005884 1.9e-34 149.8 162 52.5
Ciclev10018551m.g Citrus clementina HOM05D004529 ORTHO05D005884 3.2e-34 149.1 165 47.9
Lalb_Chr14g0370211 Lupinus albus HOM05D004529 ORTHO05D005884 3.2e-34 149.1 165 47.3
Rhsim08G0124700 Rhododendron simsii HOM05D004529 ORTHO05D005884 3.2e-34 149.1 162 51.9
Potri.017G152601 Populus trichocarpa HOM05D004529 ORTHO05D005884 9.2e-34 147.5 165 50.9
Prupe.5G240600 Prunus persica HOM05D004529 ORTHO05D005884 1.2e-33 147.1 165 47.9
QL10p034152 Quercus lobata HOM05D004529 ORTHO05D005884 1.2e-33 147.1 167 47.3
Sabra17G0125600 Salix brachista HOM05D004529 ORTHO05D005884 1.6e-33 146.7 165 49.7
Medtr6g077930 Medicago truncatula HOM05D004529 ORTHO05D005884 2.1e-33 146.4 165 47.9
FAN08G2030 Fragaria x ananassa HOM05D004529 ORTHO05D005884 3.5e-33 145.6 165 49.7
MD06G1235900 Malus domestica HOM05D004529 ORTHO05D005884 3.5e-33 145.6 171 47.4
FvH4_5g18040 Fragaria vesca HOM05D004529 ORTHO05D005884 4.6e-33 145.2 165 49.7
FAN18G3802 Fragaria x ananassa HOM05D004529 ORTHO05D005884 4.6e-33 145.2 165 49.7
Ca_27163_v3 Cicer arietinum L. HOM05D004529 ORTHO05D005884 1.0e-32 144.1 165 48.5
FAN04G1556 Fragaria x ananassa HOM05D004529 ORTHO05D005884 1.3e-32 143.7 165 48.5
Lj2g0011080 Lotus japonicus HOM05D004529 ORTHO05D005884 1.3e-32 143.7 165 47.9
arahy.Tifrunner.gnm1.ann1.FEKM9F Arachis hypogaea HOM05D004529 ORTHO05D005884 1.7e-32 143.3 165 47.9
MD14G1242900 Malus domestica HOM05D004529 ORTHO05D005884 2.3e-32 142.9 166 47.6
RcHm_v2.0_Chr7g0177561 Rosa chinensis HOM05D004529 ORTHO05D005884 2.3e-32 142.9 166 48.2
Lj5A167G40 Lonicera japonica HOM05D004529 ORTHO05D005884 3.0e-32 142.5 162 48.1
Psat0s1805g0040 Pisum sativum HOM05D004529 ORTHO05D005884 3.9e-32 142.1 165 46.7
arahy.Tifrunner.gnm1.ann1.1UV8VN Arachis hypogaea HOM05D004529 ORTHO05D005884 5.1e-32 141.7 165 47.9
RcHm_v2.0_Chr7g0177041 Rosa chinensis HOM05D004529 ORTHO05D005884 6.6e-32 141.4 167 47.9
vmacro17741 Vaccinium macrocarpon HOM05D004529 ORTHO05D005884 8.6e-32 141.0 162 50.6
Duzib128G0682 Durio zibethinus HOM05D004529 ORTHO05D005884 1.1e-31 140.6 167 46.7
PGR083G0180 Punica granatum HOM05D004529 ORTHO05D005884 1.9e-31 139.8 160 48.1
VMungo0464G0747 Vigna mungo HOM05D004529 ORTHO05D005884 1.9e-31 139.8 165 45.5
TPR.G19877 Trifolium pratense HOM05D004529 ORTHO05D005884 3.3e-31 139.0 165 47.3
Lalb_Chr24g0398601 Lupinus albus HOM05D004529 ORTHO05D005884 4.3e-31 138.7 165 46.7
ClCG01G014790 Citrullus lanatus HOM05D004529 ORTHO05D005884 5.6e-31 138.3 160 47.5
Glyma.16G212800 Glycine max HOM05D004529 ORTHO05D005884 7.3e-31 137.9 164 45.1
COL.COLO4_08720 Corchorus olitorius HOM05D004529 ORTHO05D005884 2.8e-30 136.0 203 39.9
Glyma.09G164300 Glycine max HOM05D004529 ORTHO05D005884 3.6e-30 135.6 165 44.8
GSVIVG01024252001 Vitis vinifera HOM05D004529 ORTHO05D005884 6.2e-30 134.8 162 45.7
Phvul.004G138850 Phaseolus vulgaris HOM05D004529 ORTHO05D005884 1.4e-29 133.7 165 44.2
ATR0618G236 Amborella trichopoda HOM05D004529 ORTHO05D005884 1.8e-29 133.3 161 49.1
CsaV3_1G007540 Cucumis sativus L. HOM05D004529 ORTHO05D005884 2.3e-29 132.9 157 47.8
VMungo0464G1978 Vigna mungo HOM05D004529 ORTHO05D005884 2.3e-29 132.9 162 45.1
CAN.G929.20 Capsicum annuum HOM05D004529 ORTHO05D005884 4.0e-29 132.1 161 47.8
Lalb_Chr22g0354001 Lupinus albus HOM05D004529 ORTHO05D005884 4.0e-29 132.1 166 45.2
MBI02_g39755_MAGBIO Magnolia biondii HOM05D004529 ORTHO05D005884 4.0e-29 132.1 154 48.1
Nitab4.5_0003040g0050 Nicotiana tabacum HOM05D004529 ORTHO05D005884 4.0e-29 132.1 162 46.9
FvH4_5g18430 Fragaria vesca HOM05D004529 ORTHO05D005884 8.9e-29 131.0 169 45.0
FAN18G1654 Fragaria x ananassa HOM05D004529 ORTHO05D005884 8.9e-29 131.0 169 45.0
CANSAT64G3027 Cannabis sativa HOM05D004529 ORTHO05D005884 1.2e-28 130.6 159 44.0
Peaxi162Scf00171g00234 Petunia axillaris HOM05D004529 ORTHO05D005884 1.2e-28 130.6 181 43.6
FAN08G1550 Fragaria x ananassa HOM05D004529 ORTHO05D005884 1.5e-28 130.2 169 44.4
FAN13G2071 Fragaria x ananassa HOM05D004529 ORTHO05D005884 1.5e-28 130.2 169 44.4
Peaxi162Scf00643g00541 Petunia axillaris HOM05D004529 ORTHO05D005884 2.0e-28 129.8 161 44.1
Gohir.A13G089790 Gossypium hirsutum HOM05D004529 ORTHO05D005884 2.6e-28 129.4 152 45.4
PSO675G1505 Papaver somniferum HOM05D004529 ORTHO05D005884 2.6e-28 129.4 166 44.0
Cfa014498 Carpinus fangiana HOM05D004529 ORTHO05D005884 5.8e-28 128.3 150 47.3
Haze_13045 Corylus avellana HOM05D004529 ORTHO05D005884 5.8e-28 128.3 150 47.3
PSO541G4256 Papaver somniferum HOM05D004529 ORTHO05D005884 9.9e-28 127.5 166 43.4
Eucgr.H00653 Eucalyptus grandis HOM05D004529 ORTHO05D005884 1.3e-27 127.1 166 43.4
HPP92_022512 Vanilla planifolia HOM05D004529 ORTHO05D001371 2.2e-27 126.3 162 45.7
CSS0033935 Camellia sinensis var. sinensis HOM05D004529 ORTHO05D005884 1.1e-26 124.0 137 50.4
Cfa014497 Carpinus fangiana HOM05D004529 ORTHO05D005884 1.1e-26 124.0 153 47.7
PGSC0003DMG400010150 Solanum tuberosum HOM05D004529 ORTHO05D005884 1.1e-26 124.0 163 45.4
Nitab4.5_0000033g0370 Nicotiana tabacum HOM05D004529 ORTHO05D005884 1.4e-26 123.6 162 42.6
CDE02G0511 Ceratophyllum demersum HOM05D004529 ORTHO05D005884 2.1e-25 119.8 158 42.4
FAN13G3043 Fragaria x ananassa HOM05D004529 ORTHO05D005884 2.7e-25 119.4 149 45.6
TAR627G0950 Trochodendron aralioides HOM05D004529 ORTHO05D005884 2.7e-25 119.4 168 42.3
Solyc03g098630.4 Solanum lycopersicum HOM05D004529 ORTHO05D005884 4.6e-25 118.6 163 45.4
Sopen03g029340 Solanum pennellii HOM05D004529 ORTHO05D005884 4.6e-25 118.6 163 45.4
GSVIVG01000446001 Vitis vinifera HOM05D004529 ORTHO05D005884 7.8e-25 117.9 162 42.6
Nitab4.5_0000782g0040 Nicotiana tabacum HOM05D004529 ORTHO05D005884 1.0e-24 117.5 121 52.9
CAN.G65.75 Capsicum annuum HOM05D004529 ORTHO05D005884 5.1e-24 115.2 163 41.1
MD17G1087100 Malus domestica HOM05D004529 ORTHO05D005884 8.6e-24 114.4 150 42.7
Zm00001eb271850 Zea mays HOM05D004529 ORTHO05D005884 1.5e-23 113.6 155 40.6
RcHm_v2.0_Chr2g0161201 Rosa chinensis HOM05D004529 ORTHO05D005884 5.6e-23 111.7 166 39.2
Prupe.3G227600 Prunus persica HOM05D004529 ORTHO05D005884 7.3e-23 111.3 170 41.2
Dinv02574 Davidia involucrata HOM05D004529 ORTHO05D005884 2.8e-22 109.4 145 41.4
GSVIVG01029323001 Vitis vinifera HOM05D004529 ORTHO05D005884 2.8e-22 109.4 167 38.3
Gohir.D13G093200 Gossypium hirsutum HOM05D004529 ORTHO05D005884 4.7e-22 108.6 111 52.3
Dinv02572 Davidia involucrata HOM05D004529 ORTHO05D005884 8.1e-22 107.8 145 42.8
MELO3C035753.2 Cucumis melo HOM05D004529 ORTHO05D005884 1.1e-21 107.5 178 38.8
Thecc.02G167600 Theobroma cacao HOM05D004529 ORTHO05D005884 1.8e-21 106.7 173 39.3
Sopen06g028600 Solanum pennellii HOM05D004529 ORTHO05D005884 2.4e-21 106.3 141 41.8
PSO063G4972 Papaver somniferum HOM05D004529 ORTHO05D005884 4.0e-21 105.5 163 40.5
Sopen06g028620 Solanum pennellii HOM05D004529 ORTHO05D005884 5.2e-21 105.1 141 41.8
FAN09G3058 Fragaria x ananassa HOM05D004529 ORTHO05D005884 6.9e-21 104.8 158 39.2
FvH4_6g44320 Fragaria vesca HOM05D004529 ORTHO05D005884 1.2e-20 104.0 158 38.6
FAN02G0641 Fragaria x ananassa HOM05D004529 ORTHO05D005884 1.2e-20 104.0 159 40.3
FAN14G2835 Fragaria x ananassa HOM05D004529 ORTHO05D005884 1.2e-20 104.0 158 38.6
Hund01213 Selenicereus undatus HOM05D004529 ORTHO05D005884 1.2e-20 104.0 151 41.1
Sc21g0002160 Simmondsia chinensis HOM05D004529 ORTHO05D005884 1.2e-20 104.0 153 42.5
Zm00001eb198730 Zea mays HOM05D004529 ORTHO05D005884 1.5e-20 103.6 162 40.1
PSO782G2500 Papaver somniferum HOM05D004529 ORTHO05D005884 2.0e-20 103.2 163 39.3
DCAR_011683 Daucus carota HOM05D004529 ORTHO05D005884 1.3e-19 100.5 198 37.9
FAN05G1920 Fragaria x ananassa HOM05D004529 ORTHO05D005884 1.7e-19 100.1 158 38.0
Potri.013G149400 Populus trichocarpa HOM05D004529 ORTHO05D005884 1.9e-18 96.7 149 38.3
Sabra19G0119900 Salix brachista HOM05D004529 ORTHO05D005884 9.3e-18 94.4 177 32.2
Sabra19G0134100 Salix brachista HOM05D004529 ORTHO05D005884 9.3e-18 94.4 177 32.2
Sabra19G0119700 Salix brachista HOM05D004529 ORTHO05D005884 6.0e-17 91.7 177 31.1
Os08g0100600 Oryza sativa ssp. japonica HOM05D004529 ORTHO05D005884 1.0e-16 90.9 149 39.6
Sabra19G0134300 Salix brachista HOM05D004529 ORTHO05D005884 1.0e-16 90.9 177 31.6
Atru.chr6.3093 Acer truncatum HOM05D004529 ORTHO05D005884 3.0e-16 89.4 151 38.4
Mapoly0005s0070 Marchantia polymorpha HOM05D004529 ORTHO05D000444 3.9e-16 89.0 184 34.2
Potri.019G119100 Populus trichocarpa HOM05D004529 ORTHO05D005884 4.3e-15 85.5 179 34.1
RcHm_v2.0_Chr1g0318141 Rosa chinensis HOM05D004529 ORTHO05D005884 1.6e-14 83.6 124 40.3
SMO358G0009 Selaginella moellendorffii HOM05D004529 ORTHO05D005884 2.1e-14 83.2 159 35.2
Cpa.g.sc168.9 Carica papaya HOM05D004529 ORTHO05D005884 1.1e-13 80.9 118 37.3
Os06g0729500 Oryza sativa ssp. japonica HOM05D004529 ORTHO05D005884 6.9e-13 78.2 98 40.8
Phvul.L001671 Phaseolus vulgaris HOM05D004529 ORTHO05D005884 2.0e-12 76.6 121 37.2
Ciclev10018263m.g Citrus clementina HOM05D004529 ORTHO05D005884 2.7e-09 66.2 160 30.0
FAN18G3124 Fragaria x ananassa HOM05D004529 ORTHO05D013847 2.7e-09 66.2 65 53.8
FvH4_5g18461 Fragaria vesca HOM05D004529 ORTHO05D013847 7.9e-09 64.7 65 52.3
Potri.017G151740 Populus trichocarpa HOM05D004529 ORTHO05D005884 3.7e-06 55.8 61 50.8
PGSC0003DMG400045819 Solanum tuberosum HOM05D004529 ORTHO05D005884 6.2e-06 55.1 80 41.2


User provided reference genes

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