Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1657 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 3.1e-101 371.7 175 100.0
CDE07G1453 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 3.4e-84 315.1 161 90.1
TAR381G0050 Trochodendron aralioides HOM05D006792 ORTHO05D008489 5.4e-53 211.5 159 62.3
TAR625G1025 Trochodendron aralioides HOM05D006792 ORTHO05D008489 5.4e-53 211.5 160 63.1
Nn5g30170 Nelumbo nucifera HOM05D006792 ORTHO05D008489 5.0e-51 204.9 167 59.3
Dinv35992 Davidia involucrata HOM05D006792 ORTHO05D008489 1.5e-50 203.4 160 61.2
QL02p006151 Quercus lobata HOM05D006792 ORTHO05D008489 6.1e-49 198.0 162 61.1
CSS0036679 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 4.4e-47 191.8 160 61.2
CSS0036769 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 9.8e-47 190.7 160 61.2
Haze_17574 Corylus avellana HOM05D006792 ORTHO05D008489 9.8e-47 190.7 162 54.9
ClCG08G015590 Citrullus lanatus HOM05D006792 ORTHO05D008489 1.3e-46 190.3 160 57.5
Sed0017537 Sechium edule HOM05D006792 ORTHO05D008489 1.7e-46 189.9 161 58.4
Actinidia15267 Actinidia chinensis HOM05D006792 ORTHO05D008489 3.7e-46 188.7 157 59.2
Thecc.08G014600 Theobroma cacao HOM05D006792 ORTHO05D008489 3.7e-46 188.7 158 61.4
Aqoxy5G01393 Aquilegia oxysepala HOM05D006792 ORTHO05D008489 1.8e-45 186.4 166 56.0
CiPaw.15G064100 Carya illinoinensis HOM05D006792 ORTHO05D008489 1.8e-45 186.4 157 55.4
Lj4A777T61 Lonicera japonica HOM05D006792 ORTHO05D008489 1.8e-45 186.4 154 61.0
CsaV3_2G028180 Cucumis sativus L. HOM05D006792 ORTHO05D008489 3.1e-45 185.7 159 59.1
MELO3C010894.2 Cucumis melo HOM05D006792 ORTHO05D008489 4.1e-45 185.3 159 58.5
Prupe.1G390300 Prunus persica HOM05D006792 ORTHO05D008489 1.2e-44 183.7 163 55.2
CANSAT56G4245 Cannabis sativa HOM05D006792 ORTHO05D008489 3.5e-44 182.2 163 55.8
Potri.014G035300 Populus trichocarpa HOM05D006792 ORTHO05D008489 3.5e-44 182.2 158 55.7
MD15G1036100 Malus domestica HOM05D006792 ORTHO05D008489 4.5e-44 181.8 159 57.2
GSVIVG01009569001 Vitis vinifera HOM05D006792 ORTHO05D008489 5.9e-44 181.4 157 55.4
Duzib041G0477 Durio zibethinus HOM05D006792 ORTHO05D008489 1.3e-43 180.3 158 57.0
Cfa018502 Carpinus fangiana HOM05D006792 ORTHO05D008489 2.3e-43 179.5 157 54.1
Manes.10G083100 Manihot esculenta HOM05D006792 ORTHO05D008489 2.9e-43 179.1 164 54.3
Atru.chr13.615 Acer truncatum HOM05D006792 ORTHO05D008489 6.6e-43 177.9 153 58.2
Sabra14G0025200 Salix brachista HOM05D006792 ORTHO05D008489 6.6e-43 177.9 158 54.4
Ciclev10002498m.g Citrus clementina HOM05D006792 ORTHO05D008489 1.1e-42 177.2 158 55.1
Lalb_Chr06g0172721 Lupinus albus HOM05D006792 ORTHO05D008489 1.1e-42 177.2 163 55.2
Rhsim06G0045800 Rhododendron simsii HOM05D006792 ORTHO05D008489 2.5e-42 176.0 169 55.0
RcHm_v2.0_Chr6g0299831 Rosa chinensis HOM05D006792 ORTHO05D008489 3.3e-42 175.6 155 54.8
PSO170G4587 Papaver somniferum HOM05D006792 ORTHO05D008489 7.2e-42 174.5 161 54.0
Cpa.g.sc376.3 Carica papaya HOM05D006792 ORTHO05D008489 2.1e-41 172.9 158 53.2
Hund23634 Selenicereus undatus HOM05D006792 ORTHO05D008489 2.1e-41 172.9 168 53.6
Gohir.A06G015700 Gossypium hirsutum HOM05D006792 ORTHO05D008489 3.6e-41 172.2 158 56.3
Gohir.D06G013900 Gossypium hirsutum HOM05D006792 ORTHO05D008489 4.7e-41 171.8 158 56.3
Peaxi162Scf00324g00610 Petunia axillaris HOM05D006792 ORTHO05D008489 4.7e-41 171.8 158 56.3
Aa31LG5G9340 Aethionema arabicum HOM05D006792 ORTHO05D008489 1.4e-40 170.2 153 56.2
BcaC06g32375 Brassica carinata HOM05D006792 ORTHO05D008489 1.4e-40 170.2 161 52.8
C09p70370 Brassica napus HOM05D006792 ORTHO05D008489 1.4e-40 170.2 161 52.8
HPP92_009608 Vanilla planifolia HOM05D006792 ORTHO05D008489 1.4e-40 170.2 160 53.8
AUR62016018 Chenopodium quinoa HOM05D006792 ORTHO05D008489 2.3e-40 169.5 184 49.5
Nitab4.5_0000074g0180 Nicotiana tabacum HOM05D006792 ORTHO05D008489 2.3e-40 169.5 152 55.3
Nitab4.5_0009129g0010 Nicotiana tabacum HOM05D006792 ORTHO05D008489 2.3e-40 169.5 152 56.6
Lj5g0003340 Lotus japonicus HOM05D006792 ORTHO05D008489 4.0e-40 168.7 161 52.8
FvH4_2g40760 Fragaria vesca HOM05D006792 ORTHO05D008489 8.9e-40 167.5 159 53.5
Solyc10g006520.3 Solanum lycopersicum HOM05D006792 ORTHO05D008489 1.2e-39 167.2 157 54.8
Sopen10g002470 Solanum pennellii HOM05D006792 ORTHO05D008489 1.2e-39 167.2 157 54.8
CAN.G1110.13 Capsicum annuum HOM05D006792 ORTHO05D008489 1.5e-39 166.8 157 53.5
FAN15G1697 Fragaria x ananassa HOM05D006792 ORTHO05D008489 2.0e-39 166.4 156 53.8
THA.LOC104803789 Tarenaya hassleriana HOM05D006792 ORTHO05D008489 2.0e-39 166.4 163 51.5
Sc02g0006830 Simmondsia chinensis HOM05D006792 ORTHO05D008489 2.6e-39 166.0 161 54.0
BolC9t59782H Brassica oleracea HOM05D006792 ORTHO05D008489 3.4e-39 165.6 161 51.6
vmacro21565 Vaccinium macrocarpon HOM05D006792 ORTHO05D008489 3.4e-39 165.6 165 53.3
Lsat_1_v5_gn_4_124401 Lactuca sativa HOM05D006792 ORTHO05D008489 4.4e-39 165.2 156 52.6
TWI36G0635 Tripterygium wilfordii HOM05D006792 ORTHO05D008489 4.4e-39 165.2 162 51.9
A10p29960 Brassica napus HOM05D006792 ORTHO05D008489 5.7e-39 164.9 152 53.9
Cc10_g03850 Coffea canephora HOM05D006792 ORTHO05D008489 7.5e-39 164.5 166 50.0
AUR62021223 Chenopodium quinoa HOM05D006792 ORTHO05D008489 9.8e-39 164.1 181 47.0
BraA10t45035Z Brassica rapa HOM05D006792 ORTHO05D008489 1.3e-38 163.7 152 53.3
Medtr1g075100 Medicago truncatula HOM05D006792 ORTHO05D008489 1.3e-38 163.7 155 52.3
PGR031G1590 Punica granatum HOM05D006792 ORTHO05D008489 1.3e-38 163.7 158 53.8
PGSC0003DMG400014433 Solanum tuberosum HOM05D006792 ORTHO05D008489 2.2e-38 162.9 157 53.5
Eucgr.L00645 Eucalyptus grandis HOM05D006792 ORTHO05D008489 2.9e-38 162.5 158 53.8
FAN27G1218 Fragaria x ananassa HOM05D006792 ORTHO05D008489 2.9e-38 162.5 159 53.5
TPR.G28895 Trifolium pratense HOM05D006792 ORTHO05D008489 3.7e-38 162.2 165 49.7
ATR0225G026 Amborella trichopoda HOM05D006792 ORTHO05D008489 4.9e-38 161.8 160 53.8
Carub.0006s0578 Capsella rubella HOM05D006792 ORTHO05D008489 6.4e-38 161.4 153 50.3
Carub.0006s0531 Capsella rubella HOM05D006792 ORTHO05D008489 8.3e-38 161.0 153 50.3
EL10Ac3g05711 Beta vulgaris HOM05D006792 ORTHO05D008489 1.1e-37 160.6 175 50.3
PGR031G1503 Punica granatum HOM05D006792 ORTHO05D008489 1.1e-37 160.6 158 53.8
HanXRQChr09g0268121 Helianthus annuus HOM05D006792 ORTHO05D008489 1.4e-37 160.2 152 52.6
Migut.C00611 Erythranthe guttata HOM05D006792 ORTHO05D008489 1.8e-37 159.8 162 53.1
AL6G16520 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 3.2e-37 159.1 153 52.3
AL6G16990 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 3.2e-37 159.1 153 51.0
Ah.07g209080 Amaranthus hybridus HOM05D006792 ORTHO05D008489 1.2e-36 157.1 163 50.9
BcaC06g32576 Brassica carinata HOM05D006792 ORTHO05D008489 2.0e-36 156.4 153 52.3
Oeu040900.1 Olea europaea HOM05D006792 ORTHO05D008489 2.7e-36 156.0 151 51.7
DCAR_008785 Daucus carota HOM05D006792 ORTHO05D008489 4.6e-36 155.2 157 50.3
AT5G06430 Arabidopsis thaliana HOM05D006792 ORTHO05D008489 5.9e-36 154.8 154 51.3
Gorai.010G016600 Gossypium raimondii HOM05D006792 ORTHO05D008489 7.8e-36 154.5 146 54.8
SGA_v2.0_scaffold217G42431 Striga asiatica HOM05D006792 ORTHO05D008489 7.8e-36 154.5 162 52.5
Glyma.20G204600 Glycine max HOM05D006792 ORTHO05D008489 1.7e-35 153.3 155 51.0
SGA_v2.0_scaffold127G34009 Striga asiatica HOM05D006792 ORTHO05D008489 2.3e-35 152.9 164 51.8
Sp6g36430 Schrenkiella parvula HOM05D006792 ORTHO05D008489 2.9e-35 152.5 152 50.0
arahy.Tifrunner.gnm1.ann1.LP5K48 Arachis hypogaea HOM05D006792 ORTHO05D008489 3.9e-35 152.1 152 49.3
Thhalv10014748m.g Eutrema salsugineum HOM05D006792 ORTHO05D008489 5.0e-35 151.8 152 50.7
Duzib093G1402 Durio zibethinus HOM05D006792 ORTHO05D008489 8.6e-35 151.0 148 52.7
MSTRG.1327 Avicennia marina HOM05D006792 ORTHO05D008489 1.9e-34 149.8 148 52.0
Phvul.L001959 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 2.5e-34 149.4 153 49.7
arahy.Tifrunner.gnm1.ann1.LDJ6K5 Arachis hypogaea HOM05D006792 ORTHO05D008489 3.3e-34 149.1 155 50.3
Psat6g128400 Pisum sativum HOM05D006792 ORTHO05D008489 4.3e-34 148.7 170 48.2
ECA232G0465 Erigeron canadensis HOM05D006792 ORTHO05D008489 1.6e-33 146.7 156 50.6
unitig_19.g30007 Utricularia gibba HOM05D006792 ORTHO05D008489 2.6e-31 139.4 159 47.8
COL.COLO4_26447 Corchorus olitorius HOM05D006792 ORTHO05D008489 3.4e-31 139.0 125 56.8
SalBow1G1949 Salvia bowleyana HOM05D006792 ORTHO05D008489 7.5e-31 137.9 158 46.2
SalBow6G5080 Salvia bowleyana HOM05D006792 ORTHO05D008489 1.3e-30 137.1 155 47.1
VMungo0720G1195 Vigna mungo HOM05D006792 ORTHO05D008489 4.9e-30 135.2 174 43.1
CARHR285910 Cardamine hirsuta HOM05D006792 ORTHO05D008489 1.1e-29 134.0 131 52.7
Eucgr.E03397 Eucalyptus grandis HOM05D006792 ORTHO05D008489 1.6e-28 130.2 147 47.6
Ca_09830_v3 Cicer arietinum L. HOM05D002720 ORTHO05D002901 1.9e-26 123.2 131 52.7
unitig_8.g5015 Utricularia gibba HOM05D006792 ORTHO05D008489 4.3e-26 122.1 151 45.0
Glyma.09G029200 Glycine max HOM05D006792 ORTHO05D008489 2.0e-23 113.2 63 77.8
SMO184G0001 Selaginella moellendorffii HOM05D006792 ORTHO05D008489 2.6e-23 112.8 78 66.7
Os11g0592900 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 7.5e-23 111.3 157 40.1
Mapoly0072s0021 Marchantia polymorpha HOM05D006792 ORTHO05D008489 9.8e-23 110.9 204 33.8
CARHR206180 Cardamine hirsuta HOM05D006792 ORTHO05D008489 4.1e-21 105.5 121 46.3
QL03p014147 Quercus lobata HOM05D006792 ORTHO05D008489 2.7e-20 102.8 116 50.9
Zm00001eb167650 Zea mays HOM05D006792 ORTHO05D008489 1.0e-19 100.9 158 40.5
Rhsim06G0045400 Rhododendron simsii HOM05D000500 ORTHO05D000367 3.0e-19 99.4 77 62.3
Pp3c14_7090 Physcomitrium patens HOM05D006792 ORTHO05D008489 4.3e-18 95.5 78 56.4
CBR_g61518 Chara braunii HOM05D006792 ORTHO05D008489 2.3e-16 89.7 77 53.2
Phvul.008G161700 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 5.2e-16 88.6 73 58.9
Phvul.004G112200 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 6.8e-16 88.2 129 41.1
Rhsim06G0045200 Rhododendron simsii HOM05D000500 ORTHO05D000367 6.4e-14 81.6 57 70.2
Os11g0597500 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 1.2e-09 67.4 141 31.9
Os11g0597601 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 3.4e-07 59.3 54 51.9


User provided reference genes

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