Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1640 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 1.0e-66 256.5 125 100.0
CDE02G2427 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 5.0e-61 237.7 125 92.8
Nn6g31911 Nelumbo nucifera HOM05D006134 ORTHO05D007671 2.2e-56 222.2 125 81.6
TAR376G1190 Trochodendron aralioides HOM05D006134 ORTHO05D007671 4.8e-56 221.1 125 83.2
Lalb_Chr10g0093471 Lupinus albus HOM05D006134 ORTHO05D007671 5.0e-53 211.1 125 77.6
Lalb_Chr10g0093491 Lupinus albus HOM05D006134 ORTHO05D007671 5.0e-53 211.1 125 77.6
Atru.chr9.1880 Acer truncatum HOM05D006134 ORTHO05D007671 6.5e-53 210.7 125 77.6
TAR628G0583 Trochodendron aralioides HOM05D006134 ORTHO05D007671 6.5e-53 210.7 125 79.2
ATR0730G227 Amborella trichopoda HOM05D006134 ORTHO05D007671 8.5e-53 210.3 125 77.6
arahy.Tifrunner.gnm1.ann1.PD8D7M Arachis hypogaea HOM05D006134 ORTHO05D007671 8.5e-53 210.3 125 77.6
Cpa.g.sc182.12 Carica papaya HOM05D006134 ORTHO05D007671 8.5e-53 210.3 125 78.4
Ciclev10029589m.g Citrus clementina HOM05D006134 ORTHO05D007671 8.5e-53 210.3 125 77.6
MELO3C008634.2 Cucumis melo HOM05D006134 ORTHO05D007671 1.5e-52 209.5 125 76.8
Glyma.11G156931 Glycine max HOM05D006134 ORTHO05D007671 1.5e-52 209.5 125 77.6
CSS0027024 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 2.5e-52 208.8 125 76.8
CANSAT80G1040 Cannabis sativa HOM05D006134 ORTHO05D007671 2.5e-52 208.8 125 76.0
arahy.Tifrunner.gnm1.ann1.A6PCA1 Arachis hypogaea HOM05D006134 ORTHO05D007671 3.2e-52 208.4 125 76.8
Cc02_g30030 Coffea canephora HOM05D006134 ORTHO05D007671 3.2e-52 208.4 125 78.4
CSS0024749 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 5.5e-52 207.6 125 77.6
CSS0037732 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 5.5e-52 207.6 125 77.6
Haze_00699 Corylus avellana HOM05D006134 ORTHO05D007671 5.5e-52 207.6 125 77.6
Psat5g110600 Pisum sativum HOM05D006134 ORTHO05D007671 5.5e-52 207.6 125 76.0
AUR62021421 Chenopodium quinoa HOM05D006134 ORTHO05D007671 7.2e-52 207.2 125 76.0
Manes.11G097800 Manihot esculenta HOM05D006134 ORTHO05D007671 7.2e-52 207.2 125 76.0
VMungo1080G1627 Vigna mungo HOM05D006134 ORTHO05D007671 7.2e-52 207.2 125 76.0
CsaV3_2G009990 Cucumis sativus L. HOM05D006134 ORTHO05D007671 1.2e-51 206.5 125 76.0
Dinv21074 Davidia involucrata HOM05D006134 ORTHO05D007671 1.6e-51 206.1 125 75.2
EL10Ac9g21342 Beta vulgaris HOM05D006134 ORTHO05D007671 2.7e-51 205.3 125 76.0
ECA247G3382 Erigeron canadensis HOM05D006134 ORTHO05D007671 2.7e-51 205.3 125 76.0
Sed0025018 Sechium edule HOM05D006134 ORTHO05D007671 2.7e-51 205.3 125 76.8
HanXRQChr12g0383651 Helianthus annuus HOM05D006134 ORTHO05D007671 4.7e-51 204.5 125 75.2
CiPaw.10G137600 Carya illinoinensis HOM05D006134 ORTHO05D007671 6.1e-51 204.1 125 76.8
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 6.1e-51 204.1 125 74.4
Lsat_1_v5_gn_1_25060 Lactuca sativa HOM05D006134 ORTHO05D007671 6.1e-51 204.1 124 75.0
Phvul.005G034200 Phaseolus vulgaris HOM05D006134 ORTHO05D007671 6.1e-51 204.1 125 75.2
Solyc06g007480.3 Solanum lycopersicum HOM05D006134 ORTHO05D007671 6.1e-51 204.1 125 76.8
PGSC0003DMG400020551 Solanum tuberosum HOM05D006134 ORTHO05D007671 8.0e-51 203.8 125 76.8
Aqoxy5G01105 Aquilegia oxysepala HOM05D006134 ORTHO05D007671 1.4e-50 203.0 125 75.2
CAN.G181.11 Capsicum annuum HOM05D006134 ORTHO05D007671 1.8e-50 202.6 125 76.0
Peaxi162Scf00359g00813 Petunia axillaris HOM05D006134 ORTHO05D007671 1.8e-50 202.6 125 75.2
Ah.01g023220 Amaranthus hybridus HOM05D006134 ORTHO05D007671 2.3e-50 202.2 125 74.4
Ca_17958_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 2.3e-50 202.2 125 73.6
Sopen06g002390 Solanum pennellii HOM05D006134 ORTHO05D007671 2.3e-50 202.2 125 76.0
GSVIVG01023976001 Vitis vinifera HOM05D006134 ORTHO05D007671 2.3e-50 202.2 125 74.4
SGA_v2.0_scaffold207G41895 Striga asiatica HOM05D006134 ORTHO05D007671 4.0e-50 201.4 125 76.8
Lj6g0003235 Lotus japonicus HOM05D006134 ORTHO05D007671 6.7e-50 200.7 125 72.8
Medtr3g082190 Medicago truncatula HOM05D006134 ORTHO05D007671 6.7e-50 200.7 125 73.6
Oeu055649.1 Olea europaea HOM05D006134 ORTHO05D007671 6.7e-50 200.7 125 76.8
QL11p052022 Quercus lobata HOM05D006134 ORTHO05D007671 1.2e-49 199.9 124 72.6
QL11p052248 Quercus lobata HOM05D006134 ORTHO05D007671 1.2e-49 199.9 124 72.6
Hund14365 Selenicereus undatus HOM05D006134 ORTHO05D007671 1.5e-49 199.5 125 73.6
FAN04G0013 Fragaria x ananassa HOM05D006134 ORTHO05D007671 2.0e-49 199.1 125 74.4
FAN08G0898 Fragaria x ananassa HOM05D006134 ORTHO05D007671 2.0e-49 199.1 125 74.4
Nitab4.5_0000101g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 2.0e-49 199.1 125 74.4
Mapoly0028s0104 Marchantia polymorpha HOM05D006134 ORTHO05D007671 2.6e-49 198.7 122 72.1
PSO210G5022 Papaver somniferum HOM05D006134 ORTHO05D007671 2.6e-49 198.7 125 75.2
AUR62010905 Chenopodium quinoa HOM05D006134 ORTHO05D007671 3.3e-49 198.4 137 69.3
PSO170G0646 Papaver somniferum HOM05D006134 ORTHO05D007671 4.4e-49 198.0 125 75.2
TWI79G0531 Tripterygium wilfordii HOM05D006134 ORTHO05D007671 4.4e-49 198.0 125 72.0
FvH4_5g23580 Fragaria vesca HOM05D006134 ORTHO05D007671 7.5e-49 197.2 125 73.6
FAN18G0426 Fragaria x ananassa HOM05D006134 ORTHO05D007671 7.5e-49 197.2 125 73.6
FAN18G3769 Fragaria x ananassa HOM05D006134 ORTHO05D007671 7.5e-49 197.2 125 73.6
RcHm_v2.0_Chr7g0212881 Rosa chinensis HOM05D006134 ORTHO05D007671 9.7e-49 196.8 125 73.6
Nitab4.5_0000890g0130 Nicotiana tabacum HOM05D006134 ORTHO05D007671 2.8e-48 195.3 132 72.0
SGA_v2.0_scaffold80G25864 Striga asiatica HOM05D006134 ORTHO05D007671 2.8e-48 195.3 125 74.4
HanXRQChr10g0314981 Helianthus annuus HOM05D006134 ORTHO05D007671 8.2e-48 193.7 125 72.8
FAN13G0082 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.1e-47 193.4 125 72.0
SalBow3G4511 Salvia bowleyana HOM05D006134 ORTHO05D007671 1.4e-47 193.0 125 73.6
Eucgr.F02572 Eucalyptus grandis HOM05D006134 ORTHO05D007671 1.8e-47 192.6 125 72.0
Dinv31631 Davidia involucrata HOM05D006134 ORTHO05D007671 7.0e-47 190.7 125 72.8
unitig_52.g17376 Utricularia gibba HOM05D006134 ORTHO05D007671 7.0e-47 190.7 125 72.8
Pp3c14_10610 Physcomitrium patens HOM05D006134 ORTHO05D007671 9.1e-47 190.3 122 69.7
Pp3c14_10611 Physcomitrium patens HOM05D006134 ORTHO05D007671 9.1e-47 190.3 122 69.7
Sc08g0002730 Simmondsia chinensis HOM05D006134 ORTHO05D007671 1.2e-46 189.9 125 74.4
PGR042G1126 Punica granatum HOM05D006134 ORTHO05D007671 2.0e-46 189.1 125 71.2
SMO367G0732 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 2.0e-46 189.1 124 69.4
MSTRG.5438 Avicennia marina HOM05D006134 ORTHO05D007671 5.9e-46 187.6 125 71.2
Gohir.D01G010100 Gossypium hirsutum HOM05D006134 ORTHO05D007671 5.9e-46 187.6 125 72.8
Gorai.002G012200 Gossypium raimondii HOM05D006134 ORTHO05D007671 5.9e-46 187.6 125 72.8
Oeu002964.1 Olea europaea HOM05D006134 ORTHO05D007671 5.9e-46 187.6 125 72.0
Duzib052G0391 Durio zibethinus HOM05D006134 ORTHO05D007671 1.3e-45 186.4 125 71.2
Sp7g37280 Schrenkiella parvula HOM05D006134 ORTHO05D007671 2.2e-45 185.7 125 72.0
Aa31LG6G16690 Aethionema arabicum HOM05D006134 ORTHO05D007671 3.8e-45 184.9 125 70.4
MD12G1003500 Malus domestica HOM05D006134 ORTHO05D007671 5.0e-45 184.5 103 80.6
Gohir.A01G010500 Gossypium hirsutum HOM05D006134 ORTHO05D007671 6.5e-45 184.1 125 72.0
ClCG11G010360 Citrullus lanatus HOM05D006134 ORTHO05D007671 1.1e-44 183.3 108 76.9
Migut.N01297 Erythranthe guttata HOM05D006134 ORTHO05D007671 1.1e-44 183.3 125 71.2
Potri.016G127200 Populus trichocarpa HOM05D006134 ORTHO05D007671 1.1e-44 183.3 125 70.4
Thecc.02G130200 Theobroma cacao HOM05D006134 ORTHO05D007671 1.1e-44 183.3 125 69.6
THA.LOC104807806 Tarenaya hassleriana HOM05D006134 ORTHO05D007671 1.5e-44 183.0 125 69.6
COL.COLO4_32379 Corchorus olitorius HOM05D006134 ORTHO05D007671 1.9e-44 182.6 125 68.0
Thhalv10026572m.g Eutrema salsugineum HOM05D006134 ORTHO05D007671 4.2e-44 181.4 125 68.8
Os04g0274400 Oryza sativa ssp. japonica HOM05D006134 ORTHO05D007671 1.2e-43 179.9 125 64.8
HanXRQChr07g0198481 Helianthus annuus HOM05D006134 ORTHO05D007671 2.3e-42 175.6 125 67.2
AUR62013003 Chenopodium quinoa HOM05D006134 ORTHO05D007671 3.0e-42 175.3 103 76.7
Duzib248G0743 Durio zibethinus HOM05D006134 ORTHO05D007671 4.0e-42 174.9 150 60.0
Carub.0007s0038 Capsella rubella HOM05D006134 ORTHO05D007671 1.2e-41 173.3 125 68.8
AUR62015152 Chenopodium quinoa HOM05D006134 ORTHO05D007671 2.6e-41 172.2 103 75.7
AUR62010013 Chenopodium quinoa HOM05D006134 ORTHO05D007671 4.4e-41 171.4 103 76.7
Rhsim11G0193500 Rhododendron simsii HOM05D006134 ORTHO05D007671 1.7e-40 169.5 172 51.7
vmacro02291 Vaccinium macrocarpon HOM05D006134 ORTHO05D007671 2.2e-40 169.1 204 46.1
CBR_g12196 Chara braunii HOM05D006134 ORTHO05D007671 3.7e-40 168.3 119 68.9
Prupe.7G004000 Prunus persica HOM05D006134 ORTHO05D007671 4.8e-40 167.9 125 64.0
Sed0020335 Sechium edule HOM05D006134 ORTHO05D007671 3.1e-39 165.2 123 63.4
AT4G38495 Arabidopsis thaliana HOM05D006134 ORTHO05D007671 5.4e-39 164.5 125 63.2
AL7G10360 Arabidopsis lyrata HOM05D006134 ORTHO05D007671 7.7e-38 160.6 120 64.2
A01p00050 Brassica napus HOM05D006134 ORTHO05D007671 1.9e-36 156.0 125 62.4
BcaNung01304 Brassica carinata HOM05D006134 ORTHO05D007671 3.3e-36 155.2 125 61.6
C01p00090 Brassica napus HOM05D006134 ORTHO05D007671 3.3e-36 155.2 125 61.6
Zm00001eb420290 Zea mays HOM05D006134 ORTHO05D007671 7.2e-36 154.1 113 59.3
BcaNung04221 Brassica carinata HOM05D006134 ORTHO05D007671 2.8e-35 152.1 125 64.0
Sabra16G0121200 Salix brachista HOM05D006134 ORTHO05D007671 8.3e-24 114.0 81 65.4
Sabra16G0122100 Salix brachista HOM05D006134 ORTHO05D007671 8.3e-24 114.0 81 65.4
SEGI_00696 Sequoiadendron giganteum HOM05D006134 ORTHO05D007671 1.7e-21 106.3 66 71.2
Prupe.4G038000 Prunus persica HOM05D006134 ORTHO05D007671 8.6e-21 104.0 108 50.0
BraA01t00010Z Brassica rapa HOM05D006134 ORTHO05D007671 8.0e-19 97.4 81 59.3
BolC1t00014H Brassica oleracea HOM05D006134 ORTHO05D007671 1.4e-18 96.7 81 58.0
A07p02890 Brassica napus HOM05D006134 ORTHO05D007671 9.8e-17 90.5 78 57.7
BraA07t28089Z Brassica rapa HOM05D006134 ORTHO05D007671 9.8e-17 90.5 78 57.7
Ca_02756_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 9.8e-17 90.5 58 69.0
Ca_02758_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 9.8e-17 90.5 58 69.0
Nitab4.5_0000165g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 9.8e-17 90.5 69 65.2
Ca_02994_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 4.9e-16 88.2 53 73.6
SHI24498 Sapria himalayana HOM05D006134 ORTHO05D007671 1.9e-12 76.3 58 58.6
TPR.G34385 Trifolium pratense HOM05D006134 ORTHO05D007671 4.3e-12 75.1 44 79.5
Sabra16G0121700 Salix brachista HOM05D006134 ORTHO05D007671 5.6e-12 74.7 45 75.6
CARHR294230 Cardamine hirsuta HOM05D006134 ORTHO05D007671 2.1e-11 72.8 79 51.9
EL10Ac8g18393 Beta vulgaris HOM05D006134 ORTHO05D007671 3.6e-11 72.0 48 75.0
SMO230G0118 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 8.3e-08 60.8 40 70.0


User provided reference genes

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