Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1632 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 4.2e-119 431.4 226 100.0
CDE02G1129 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 5.1e-72 275.0 222 62.6
Ciclev10032669m.g Citrus clementina HOM05D001304 ORTHO05D008890 2.6e-68 262.7 225 61.3
CDE09G0600 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 1.7e-67 260.0 222 61.3
TAR622G1249 Trochodendron aralioides HOM05D001304 ORTHO05D008890 2.2e-67 259.6 228 63.2
Dinv11009 Davidia involucrata HOM05D001304 ORTHO05D008890 3.8e-67 258.8 229 60.7
CsaV3_2G025190 Cucumis sativus L. HOM05D001304 ORTHO05D008890 1.4e-66 256.9 228 61.4
Haze_12318 Corylus avellana HOM05D001304 ORTHO05D008890 2.4e-66 256.1 225 60.4
Cfa009288 Carpinus fangiana HOM05D001304 ORTHO05D008890 5.5e-66 255.0 227 60.8
MSTRG.7966 Avicennia marina HOM05D001304 ORTHO05D008890 1.6e-65 253.4 221 60.2
Oeu020321.1 Olea europaea HOM05D001304 ORTHO05D008890 1.6e-65 253.4 229 59.4
TWI36G0586 Tripterygium wilfordii HOM05D001304 ORTHO05D008890 1.6e-65 253.4 223 60.1
Manes.12G017100 Manihot esculenta HOM05D001304 ORTHO05D008890 7.9e-65 251.1 225 60.0
PGR119G0865 Punica granatum HOM05D001304 ORTHO05D008890 2.3e-64 249.6 229 58.5
Cc11_g16390 Coffea canephora HOM05D001304 ORTHO05D008890 6.7e-64 248.1 219 58.9
Potri.010G053600 Populus trichocarpa HOM05D001304 ORTHO05D008890 8.7e-64 247.7 237 59.1
VMungo1383G0240 Vigna mungo HOM05D001304 ORTHO05D008890 1.1e-63 247.3 232 58.2
Glyma.11G246700 Glycine max HOM05D001304 ORTHO05D008890 1.5e-63 246.9 235 54.0
RcHm_v2.0_Chr4g0431911 Rosa chinensis HOM05D001304 ORTHO05D008890 3.3e-63 245.7 228 54.4
Eucgr.H04690 Eucalyptus grandis HOM05D001304 ORTHO05D008890 9.6e-63 244.2 229 57.2
Aqoxy5G03572 Aquilegia oxysepala HOM05D001304 ORTHO05D008890 1.6e-62 243.4 225 59.1
A07p32450 Brassica napus HOM05D001304 ORTHO05D008890 2.1e-62 243.0 223 57.4
BraA07t30869Z Brassica rapa HOM05D001304 ORTHO05D008890 2.1e-62 243.0 223 57.4
Nitab4.5_0000041g0390 Nicotiana tabacum HOM05D001304 ORTHO05D008890 2.1e-62 243.0 227 58.6
Prupe.1G237600 Prunus persica HOM05D001304 ORTHO05D008890 2.1e-62 243.0 230 55.7
arahy.Tifrunner.gnm1.ann1.VHC2JK Arachis hypogaea HOM05D001304 ORTHO05D008890 2.8e-62 242.7 230 56.5
CiPaw.05G174500 Carya illinoinensis HOM05D001304 ORTHO05D008890 2.8e-62 242.7 179 64.8
FAN17G2678 Fragaria x ananassa HOM05D001304 ORTHO05D008890 3.7e-62 242.3 227 55.1
FvH4_4g24830 Fragaria vesca HOM05D001304 ORTHO05D008890 4.8e-62 241.9 223 55.6
FAN07G1515 Fragaria x ananassa HOM05D001304 ORTHO05D008890 4.8e-62 241.9 223 55.6
FAN12G0763 Fragaria x ananassa HOM05D001304 ORTHO05D008890 4.8e-62 241.9 223 55.6
FAN22G1346 Fragaria x ananassa HOM05D001304 ORTHO05D008890 4.8e-62 241.9 223 55.6
Thhalv10019020m.g Eutrema salsugineum HOM05D001304 ORTHO05D008890 6.2e-62 241.5 227 55.9
Sed0004969 Sechium edule HOM05D001304 ORTHO05D008890 6.2e-62 241.5 233 57.1
PGSC0003DMG400017453 Solanum tuberosum HOM05D001304 ORTHO05D008890 6.2e-62 241.5 225 57.8
SGA_v2.0_scaffold484G52361 Striga asiatica HOM05D001304 ORTHO05D008890 1.1e-61 240.7 229 56.8
BcaC08g46187 Brassica carinata HOM05D001304 ORTHO05D008890 1.4e-61 240.4 226 55.8
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 1.4e-61 240.4 226 55.8
SalBow2G0118 Salvia bowleyana HOM05D001304 ORTHO05D008890 1.4e-61 240.4 228 55.3
AL2G26400 Arabidopsis lyrata HOM05D001304 ORTHO05D008890 1.8e-61 240.0 227 55.9
BcaC08g46045 Brassica carinata HOM05D001304 ORTHO05D008890 1.8e-61 240.0 223 57.0
C06p38480 Brassica napus HOM05D001304 ORTHO05D008890 1.8e-61 240.0 223 57.0
MD13G1108600 Malus domestica HOM05D001304 ORTHO05D008890 1.8e-61 240.0 227 55.5
Sabra10G0017000 Salix brachista HOM05D001304 ORTHO05D008890 1.8e-61 240.0 233 58.8
Solyc05g014310.3 Solanum lycopersicum HOM05D001304 ORTHO05D008890 1.8e-61 240.0 227 57.7
BcaB03g15175 Brassica carinata HOM05D001304 ORTHO05D008890 2.4e-61 239.6 225 56.4
ATR0824G252 Amborella trichopoda HOM05D001304 ORTHO05D008890 3.1e-61 239.2 197 59.4
Carub.0002s1413 Capsella rubella HOM05D001304 ORTHO05D008890 3.1e-61 239.2 218 58.3
AT1G67700 Arabidopsis thaliana HOM05D001304 ORTHO05D008890 4.0e-61 238.8 230 54.8
Phvul.001G258300 Phaseolus vulgaris HOM05D001304 ORTHO05D008890 4.0e-61 238.8 227 56.4
COL.COLO4_23565 Corchorus olitorius HOM05D001304 ORTHO05D008890 5.3e-61 238.4 234 55.6
THA.LOC104825532 Tarenaya hassleriana HOM05D001304 ORTHO05D008890 5.3e-61 238.4 222 59.0
Actinidia15135 Actinidia chinensis HOM05D001304 ORTHO05D008890 6.9e-61 238.0 217 59.9
Sopen05g009420 Solanum pennellii HOM05D001304 ORTHO05D008890 9.0e-61 237.7 223 58.7
CANSAT01G0179 Cannabis sativa HOM05D001304 ORTHO05D008890 1.2e-60 237.3 234 55.1
Sp5g22690 Schrenkiella parvula HOM05D001304 ORTHO05D008890 2.6e-60 236.1 227 55.1
Atru.chr11.2216 Acer truncatum HOM05D001304 ORTHO05D008890 4.5e-60 235.3 201 62.7
Ca_16494_v3 Cicer arietinum L. HOM05D001304 ORTHO05D008890 2.9e-59 232.6 219 57.1
AUR62005553 Chenopodium quinoa HOM05D001304 ORTHO05D008890 3.8e-59 232.3 226 54.9
PSO782G0777 Papaver somniferum HOM05D001304 ORTHO05D008890 3.8e-59 232.3 224 56.2
CARHR060290 Cardamine hirsuta HOM05D001304 ORTHO05D008890 4.9e-59 231.9 233 52.8
Aa31LG4G12100 Aethionema arabicum HOM05D001304 ORTHO05D008890 8.4e-59 231.1 229 53.7
Gohir.D04G181000 Gossypium hirsutum HOM05D001304 ORTHO05D008890 8.4e-59 231.1 239 52.7
AUR62024180 Chenopodium quinoa HOM05D001304 ORTHO05D008890 1.1e-58 230.7 232 53.4
PSO063G7645 Papaver somniferum HOM05D001304 ORTHO05D008890 1.9e-58 229.9 224 55.8
unitig_8.g2912 Utricularia gibba HOM05D000468 ORTHO05D008890 1.9e-58 229.9 220 56.4
Rhsim12G0107100 Rhododendron simsii HOM05D001304 ORTHO05D008890 2.5e-58 229.6 226 54.0
Sc04g0009800 Simmondsia chinensis HOM05D001304 ORTHO05D008890 4.2e-58 228.8 222 55.4
Ah.02g130500 Amaranthus hybridus HOM05D001304 ORTHO05D008890 9.3e-58 227.6 214 54.2
Peaxi162Scf00128g00729 Petunia axillaris HOM05D001304 ORTHO05D008890 9.3e-58 227.6 229 55.0
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 6.0e-57 224.9 255 49.4
ECA233G5962 Erigeron canadensis HOM05D000468 ORTHO05D000548 2.3e-56 223.0 193 57.5
Migut.K00680 Erythranthe guttata HOM05D001304 ORTHO05D008890 2.3e-56 223.0 229 52.0
EL10As2g23248 Beta vulgaris HOM05D001304 ORTHO05D008890 3.0e-56 222.6 231 53.7
HPP92_004594 Vanilla planifolia HOM05D001304 ORTHO05D008890 6.7e-56 221.5 160 65.0
Lj6C819T3 Lonicera japonica HOM05D001304 ORTHO05D008890 1.9e-55 219.9 179 61.5
Nitab4.5_0001318g0090 Nicotiana tabacum HOM05D001304 ORTHO05D008890 1.9e-55 219.9 227 56.4
Gohir.A04G137800 Gossypium hirsutum HOM05D001304 ORTHO05D008890 1.4e-53 213.8 239 51.9
Gorai.012G174200 Gossypium raimondii HOM05D001304 ORTHO05D008890 1.8e-53 213.4 156 65.4
Duzib251G0230 Durio zibethinus HOM05D001304 ORTHO05D008890 4.1e-53 212.2 155 65.8
Lalb_Chr08g0230761 Lupinus albus HOM05D001304 ORTHO05D008890 5.3e-53 211.8 146 68.5
Thecc.02G270700 Theobroma cacao HOM05D001304 ORTHO05D008890 5.3e-53 211.8 156 65.4
HanXRQChr08g0207321 Helianthus annuus HOM05D001304 ORTHO05D008890 1.5e-52 210.3 167 61.1
Lj6g0017703 Lotus japonicus HOM05D001304 ORTHO05D008890 1.7e-51 206.8 232 50.4
Hund06057 Selenicereus undatus HOM05D001304 ORTHO05D008890 3.8e-51 205.7 234 50.4
Os02g0600200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D008890 8.4e-51 204.5 177 56.5
Zm00001eb246340 Zea mays HOM05D001304 ORTHO05D008890 1.9e-50 203.4 189 54.5
Medtr3g086040 Medicago truncatula HOM05D001304 ORTHO05D008890 2.3e-48 196.4 199 52.8
CSS0032412 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D008721 2.5e-47 193.0 135 68.9
TPR.G33410 Trifolium pratense HOM05D001304 ORTHO05D008890 3.3e-47 192.6 127 66.9
Cpa.g.c30628.2 Carica papaya HOM05D001304 ORTHO05D008890 7.4e-47 191.4 226 47.3
GSVIVG01010306001 Vitis vinifera HOM05D001304 ORTHO05D008890 7.4e-47 191.4 140 66.4
Lsat_1_v5_gn_8_150960 Lactuca sativa HOM05D001304 ORTHO05D008890 2.4e-45 186.4 234 46.6
TAR629G1650 Trochodendron aralioides HOM05D001304 ORTHO05D008890 2.6e-44 183.0 137 65.7
vmacro16148 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 5.0e-43 178.7 135 63.0
Actinidia24567 Actinidia chinensis HOM05D001304 ORTHO05D008890 4.6e-41 172.2 217 47.5
AagrBONN_evm.TU.Sc2ySwM_368.469 Anthoceros agrestis HOM05D001304 ORTHO05D008890 9.7e-39 164.5 165 46.1
Hma1.2p1_0079F.1_g041530 Hydrangea macrophylla HOM05D001304 ORTHO05D008890 5.3e-37 158.7 225 44.4
Pp3c14_9580 Physcomitrium patens HOM05D001304 ORTHO05D008890 1.5e-36 157.1 170 46.5
SEGI_40444 Sequoiadendron giganteum HOM05D001304 ORTHO05D008890 2.0e-36 156.8 193 42.5
Psat5g093920 Pisum sativum HOM05D001304 ORTHO05D008890 1.7e-35 153.7 93 71.0
BolC6t38945H Brassica oleracea HOM05D001304 ORTHO05D008890 2.2e-35 153.3 119 63.0
MELO3C010716.2 Cucumis melo HOM05D001304 ORTHO05D008890 1.6e-33 147.1 140 57.9
Mapoly0101s0039 Marchantia polymorpha HOM05D001304 ORTHO05D008890 2.7e-33 146.4 185 40.0
CBR_g28672 Chara braunii HOM05D001304 ORTHO05D008890 1.3e-30 137.5 166 42.2
arahy.Tifrunner.gnm1.ann1.Q18UTF Arachis hypogaea HOM05D001304 ORTHO05D008890 4.1e-29 132.5 230 40.4
Cfa021197 Carpinus fangiana HOM05D001304 ORTHO05D008890 1.3e-27 127.5 136 52.2
DCAR_026486 Daucus carota HOM05D000468 ORTHO05D008890 1.5e-26 124.0 138 47.8
SMO367G0665 Selaginella moellendorffii HOM05D001304 ORTHO05D008890 4.0e-24 115.9 170 34.1
Duzib248G0877 Durio zibethinus HOM05D001304 ORTHO05D008890 1.5e-23 114.0 151 43.7
MBI06_g05241_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D008890 1.3e-22 110.9 87 59.8
Oeu009356.1 Olea europaea HOM05D001304 ORTHO05D008890 1.2e-15 87.8 57 71.9
ClCG08G017440 Citrullus lanatus HOM05D001304 ORTHO05D008890 5.9e-12 75.5 90 53.3
PRCOL_00000361 Prasinoderma coloniale HOM05D001304 ORTHO05D008890 1.7e-11 73.9 118 28.0
MCO01G115 Micromonas commoda HOM05D001304 ORTHO05D008890 1.4e-08 64.3 181 24.9
Cre03.g146167 Chlamydomonas reinhardtii HOM05D001304 ORTHO05D008890 1.5e-07 60.8 180 28.3
vmacro16147 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 1.5e-07 60.8 94 41.5


User provided reference genes

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