Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1589 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 0.0e+00 1244.6 697 100.0
MBI13_g24960_MAGBIO Magnolia biondii HOM05D006963 ORTHO05D008783 1.7e-142 510.8 636 51.6
Manes.04G012900 Manihot esculenta HOM05D006963 ORTHO05D008783 1.1e-136 491.5 618 49.8
TAR369G1146 Trochodendron aralioides HOM05D006963 ORTHO05D008783 1.5e-135 487.6 604 50.2
Duzib168G1517 Durio zibethinus HOM05D006963 ORTHO05D008783 5.9e-135 485.7 618 49.5
Thecc.09G298600 Theobroma cacao HOM05D006963 ORTHO05D008783 2.9e-134 483.4 621 49.4
Dinv16225 Davidia involucrata HOM05D006963 ORTHO05D008783 3.8e-134 483.0 628 49.5
MD03G1129000 Malus domestica HOM05D006963 ORTHO05D008783 5.0e-134 482.6 640 48.6
ClCG02G021610 Citrullus lanatus HOM05D006963 ORTHO05D008783 6.5e-134 482.3 621 47.7
Potri.009G005300 Populus trichocarpa HOM05D006963 ORTHO05D008783 6.5e-134 482.3 620 49.0
MELO3C026954.2 Cucumis melo HOM05D006963 ORTHO05D008783 1.4e-133 481.1 623 47.4
Gorai.013G259300 Gossypium raimondii HOM05D006963 ORTHO05D008783 5.5e-133 479.2 622 49.8
COL.COLO4_19194 Corchorus olitorius HOM05D006963 ORTHO05D008783 9.3e-133 478.4 615 48.5
Prupe.6G112700 Prunus persica HOM05D006963 ORTHO05D008783 1.6e-132 477.6 636 48.9
CsaV3_6G014380 Cucumis sativus L. HOM05D006963 ORTHO05D008783 1.3e-131 474.6 618 47.2
PSO339G1013 Papaver somniferum HOM05D006963 ORTHO05D008783 3.0e-131 473.4 626 47.9
Gohir.A13G223800 Gossypium hirsutum HOM05D006963 ORTHO05D008783 3.9e-131 473.0 622 48.7
Sed0000311 Sechium edule HOM05D006963 ORTHO05D008783 3.9e-131 473.0 621 47.2
Aqoxy1G01103 Aquilegia oxysepala HOM05D006963 ORTHO05D008783 8.7e-131 471.9 636 48.0
FAN25G3586 Fragaria x ananassa HOM05D006963 ORTHO05D008783 3.3e-130 469.9 632 48.6
Atru.chr3.3517 Acer truncatum HOM05D006963 ORTHO05D008783 4.3e-130 469.5 617 47.6
PSO063G0444 Papaver somniferum HOM05D006963 ORTHO05D008783 9.7e-130 468.4 711 44.4
CANSAT64G0534 Cannabis sativa HOM05D006963 ORTHO05D008783 2.2e-129 467.2 709 44.4
RcHm_v2.0_Chr5g0056861 Rosa chinensis HOM05D006963 ORTHO05D008783 4.8e-129 466.1 616 48.9
Atru.chr3.3511 Acer truncatum HOM05D006963 ORTHO05D008783 8.2e-129 465.3 617 47.3
Rhsim01G0210700 Rhododendron simsii HOM05D006963 ORTHO05D008783 9.1e-128 461.8 619 47.3
FvH4_3g30640 Fragaria vesca HOM05D006963 ORTHO05D008783 1.2e-127 461.5 632 48.3
GSVIVG01031463001 Vitis vinifera HOM05D006963 ORTHO05D008783 1.2e-127 461.5 615 46.2
FAN11G1352 Fragaria x ananassa HOM05D006963 ORTHO05D008783 2.0e-127 460.7 632 48.3
Solyc06g074810.3 Solanum lycopersicum HOM05D006963 ORTHO05D008783 2.0e-127 460.7 636 46.4
Sopen06g031250 Solanum pennellii HOM05D006963 ORTHO05D008783 2.0e-127 460.7 636 46.4
PGSC0003DMG400007133 Solanum tuberosum HOM05D006963 ORTHO05D008783 2.0e-127 460.7 643 45.6
Eucgr.J00389 Eucalyptus grandis HOM05D006963 ORTHO05D008783 2.6e-127 460.3 630 47.8
Nitab4.5_0003155g0020 Nicotiana tabacum HOM05D006963 ORTHO05D008783 1.0e-126 458.4 653 44.9
Haze_23703 Corylus avellana HOM05D006963 ORTHO05D008783 5.0e-126 456.1 625 47.5
FAN21G1782 Fragaria x ananassa HOM05D006963 ORTHO05D008783 5.0e-126 456.1 629 47.7
Glyma.12G178700 Glycine max HOM05D006963 ORTHO05D008783 1.1e-125 454.9 630 45.9
QL01p015018 Quercus lobata HOM05D006963 ORTHO05D008783 3.2e-125 453.4 626 46.6
FAN16G1993 Fragaria x ananassa HOM05D006963 ORTHO05D008783 5.5e-125 452.6 628 47.8
Glyma.13G322000 Glycine max HOM05D006963 ORTHO05D008783 5.5e-125 452.6 627 46.6
Lalb_Chr24g0394941 Lupinus albus HOM05D006963 ORTHO05D008783 5.5e-125 452.6 612 46.6
Cfa010289 Carpinus fangiana HOM05D006963 ORTHO05D008783 2.1e-124 450.7 624 47.0
CiPaw.13G122900 Carya illinoinensis HOM05D006963 ORTHO05D008783 2.1e-124 450.7 620 46.8
Cc01_g10290 Coffea canephora HOM05D006963 ORTHO05D008783 3.6e-124 449.9 656 45.4
Gohir.D13G228600 Gossypium hirsutum HOM05D006963 ORTHO05D008783 7.9e-124 448.7 622 48.2
vmacro14391 Vaccinium macrocarpon HOM05D006963 ORTHO05D008783 1.0e-123 448.4 629 45.6
Phvul.005G130400 Phaseolus vulgaris HOM05D006963 ORTHO05D008783 3.9e-123 446.4 615 46.2
Ciclev10027698m.g Citrus clementina HOM05D006963 ORTHO05D008783 6.7e-123 445.7 619 45.4
MSTRG.18703 Avicennia marina HOM05D006963 ORTHO05D008783 1.1e-122 444.9 630 46.3
SEGI_09379 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 3.3e-122 443.4 778 40.2
arahy.Tifrunner.gnm1.ann1.5C5N68 Arachis hypogaea HOM05D006963 ORTHO05D008783 4.4e-122 443.0 619 45.2
arahy.Tifrunner.gnm1.ann1.10EEU4 Arachis hypogaea HOM05D006963 ORTHO05D008783 9.7e-122 441.8 619 45.1
HanXRQChr11g0346501 Helianthus annuus HOM05D006963 ORTHO05D008783 1.3e-121 441.4 619 46.5
Sabra09G0002400 Salix brachista HOM05D006963 ORTHO05D008783 2.2e-121 440.7 619 47.3
Sabra04G0147300 Salix brachista HOM05D006963 ORTHO05D008783 8.2e-121 438.7 614 45.8
Aa31LG5G7960 Aethionema arabicum HOM05D006963 ORTHO05D008783 1.1e-120 438.3 641 45.4
AL4G21950 Arabidopsis lyrata HOM05D006963 ORTHO05D008783 6.9e-120 435.6 629 45.2
Psat5g253040 Pisum sativum HOM05D006963 ORTHO05D008783 2.6e-119 433.7 623 46.4
Ca_01706_v3 Cicer arietinum L. HOM05D006963 ORTHO05D008783 1.3e-118 431.4 622 46.6
Lj3g0023334 Lotus japonicus HOM05D006963 ORTHO05D008783 2.2e-118 430.6 615 45.4
ECA248G2820 Erigeron canadensis HOM05D006963 ORTHO05D008783 8.5e-118 428.7 616 45.6
PGR119G1224 Punica granatum HOM05D006963 ORTHO05D008783 1.4e-117 427.9 617 44.2
EL10Ac9g22623 Beta vulgaris HOM05D006963 ORTHO05D008783 4.2e-117 426.4 629 45.3
VMungo1080G0719 Vigna mungo HOM05D006963 ORTHO05D008783 9.4e-117 425.2 615 45.4
Medtr2g084285 Medicago truncatula HOM05D006963 ORTHO05D008783 6.1e-116 422.5 617 44.7
DCAR_018766 Daucus carota HOM05D006963 ORTHO05D008783 2.3e-115 420.6 628 45.5
CAN.G1432.10 Capsicum annuum HOM05D006963 ORTHO05D008783 1.7e-113 414.5 663 40.1
Sc06g0010790 Simmondsia chinensis HOM05D006963 ORTHO05D008783 1.4e-112 411.4 618 44.8
ATR0329G003 Amborella trichopoda HOM05D006963 ORTHO05D008783 1.8e-112 411.0 684 42.3
TPR.G21046 Trifolium pratense HOM05D006963 ORTHO05D008783 5.9e-111 406.0 647 43.7
Hund08356 Selenicereus undatus HOM05D006963 ORTHO05D008783 5.5e-109 399.4 622 42.4
Ah.01g003350 Amaranthus hybridus HOM05D006963 ORTHO05D008783 1.0e-107 395.2 621 42.7
CSS0000606 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 1.8e-107 394.4 515 48.2
Migut.D02292 Erythranthe guttata HOM05D006963 ORTHO05D008783 1.8e-107 394.4 626 42.8
TWI79G0599 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 7.5e-106 389.0 612 42.8
Lsat_1_v5_gn_1_64681 Lactuca sativa HOM05D006963 ORTHO05D008783 1.7e-105 387.9 630 41.3
Zm00001eb190880 Zea mays HOM05D006963 ORTHO05D008783 2.2e-105 387.5 622 43.6
TWI79G0699 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 3.7e-105 386.7 623 41.9
Os02g0823800 Oryza sativa ssp. japonica HOM05D006963 ORTHO05D008783 4.1e-104 383.3 614 43.5
SGA_v2.0_scaffold27G11571 Striga asiatica HOM05D006963 ORTHO05D008783 4.1e-104 383.3 618 40.8
Nitab4.5_0001163g0050 Nicotiana tabacum HOM05D006963 ORTHO05D008783 1.0e-102 378.6 635 40.2
Oeu008360.1 Olea europaea HOM05D006963 ORTHO05D008783 1.2e-100 371.7 501 45.1
Peaxi162Scf00114g00812 Petunia axillaris HOM05D006963 ORTHO05D008783 1.7e-97 361.3 634 37.7
Cpa.g.sc1.5 Carica papaya HOM05D006963 ORTHO05D008783 2.2e-97 360.9 596 43.1
CARHR121070 Cardamine hirsuta HOM05D006963 ORTHO05D008783 1.2e-95 355.1 506 44.9
Lj2A1007T38 Lonicera japonica HOM05D006963 ORTHO05D008783 7.5e-90 335.9 420 51.2
HPP92_025769 Vanilla planifolia HOM05D006963 ORTHO05D008783 5.9e-87 326.2 414 51.0
AUR62029159 Chenopodium quinoa HOM05D006963 ORTHO05D008783 1.0e-86 325.5 482 47.5
Mapoly0011s0199 Marchantia polymorpha HOM05D006963 ORTHO05D008783 2.0e-79 301.2 636 36.2
AUR62014974 Chenopodium quinoa HOM05D006963 ORTHO05D008783 6.6e-78 296.2 527 42.9
AagrBONN_evm.TU.Sc2ySwM_344.4789 Anthoceros agrestis HOM05D006963 ORTHO05D008783 4.3e-77 293.5 612 37.3
Pp3c19_6480 Physcomitrium patens HOM05D006963 ORTHO05D008783 1.5e-69 268.5 651 35.3
unitig_899.g15359 Utricularia gibba HOM05D006963 ORTHO05D008783 2.1e-63 248.1 615 31.5
Actinidia20425 Actinidia chinensis HOM05D006963 ORTHO05D008783 1.6e-44 185.3 258 43.4
CBR_g8254 Chara braunii HOM05D006963 ORTHO05D008783 3.8e-25 120.9 406 27.8
Nn2g13854 Nelumbo nucifera HOM05D006963 ORTHO05D008783 1.7e-17 95.5 201 44.8
Dinv29380 Davidia involucrata HOM05D006963 ORTHO05D008783 1.1e-16 92.8 120 43.3
CSS0014134 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 4.6e-15 87.4 117 43.6
Psat0s1214g0160 Pisum sativum HOM05D006963 ORTHO05D008783 5.7e-13 80.5 86 47.7
Cc00_g22940 Coffea canephora HOM05D006963 ORTHO05D008783 1.3e-12 79.3 51 70.6
Oeu008361.1 Olea europaea HOM05D006963 ORTHO05D008783 1.4e-08 65.9 113 35.4
Pp3c7_26050 Physcomitrium patens HOM05D006963 ORTHO05D008783 6.1e-07 60.5 74 40.5
MD11G1148100 Malus domestica HOM05D006963 ORTHO05D008783 3.0e-06 58.2 118 37.3


User provided reference genes

Program Settings