Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 1.6e-88 329.3 163 100.0
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 1.3e-48 196.8 158 58.9
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 1.7e-48 196.4 160 58.1
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 1.7e-48 196.4 158 58.9
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 2.2e-48 196.1 163 58.9
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 3.7e-48 195.3 147 63.3
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 8.2e-48 194.1 147 63.3
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 9.1e-47 190.7 149 61.7
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 2.6e-46 189.1 149 61.1
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 3.5e-46 188.7 155 61.9
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 2.9e-45 185.7 162 56.2
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 2.9e-45 185.7 148 59.5
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 3.8e-45 185.3 147 63.3
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 3.8e-45 185.3 162 58.0
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 3.8e-45 185.3 147 63.3
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 6.5e-45 184.5 163 57.1
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 6.5e-45 184.5 152 57.9
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 8.5e-45 184.1 156 59.0
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 8.5e-45 184.1 159 56.6
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 1.1e-44 183.7 149 59.1
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 1.1e-44 183.7 143 59.4
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 1.5e-44 183.3 163 54.6
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 1.9e-44 183.0 144 58.3
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 1.9e-44 183.0 162 58.0
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 1.9e-44 183.0 154 59.1
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 1.9e-44 183.0 143 60.1
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 3.2e-44 182.2 151 61.6
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 4.2e-44 181.8 149 59.1
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 9.4e-44 180.6 152 56.6
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 9.4e-44 180.6 150 58.0
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 9.4e-44 180.6 156 59.0
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 1.2e-43 180.3 159 57.2
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 1.2e-43 180.3 149 58.4
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 1.6e-43 179.9 166 56.0
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 1.6e-43 179.9 162 55.6
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 2.1e-43 179.5 162 57.4
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 2.7e-43 179.1 160 56.9
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 2.7e-43 179.1 147 55.8
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 4.7e-43 178.3 159 56.6
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 4.7e-43 178.3 159 50.9
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 6.1e-43 177.9 149 57.7
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 8.0e-43 177.6 151 58.9
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 1.0e-42 177.2 150 56.7
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 1.4e-42 176.8 164 54.9
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 1.4e-42 176.8 152 56.6
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 1.8e-42 176.4 146 62.3
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 2.3e-42 176.0 169 56.2
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 2.3e-42 176.0 151 59.6
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 3.0e-42 175.6 141 59.6
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 4.0e-42 175.3 161 54.0
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 4.0e-42 175.3 151 58.3
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 5.2e-42 174.9 149 55.7
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 5.2e-42 174.9 151 56.3
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 6.8e-42 174.5 151 59.6
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 6.8e-42 174.5 182 49.5
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 6.8e-42 174.5 163 54.6
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 8.8e-42 174.1 151 58.9
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 8.8e-42 174.1 143 57.3
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 2.0e-41 172.9 161 56.5
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 3.4e-41 172.2 147 55.1
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 3.4e-41 172.2 151 58.9
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 4.4e-41 171.8 163 55.2
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 9.7e-41 170.6 162 56.2
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 2.2e-40 169.5 160 54.4
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 1.1e-39 167.2 156 54.5
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 5.3e-39 164.9 154 51.9
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 5.3e-39 164.9 144 57.6
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 9.1e-39 164.1 148 53.4
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 1.2e-38 163.7 155 51.6
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 1.2e-38 163.7 150 52.7
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 2.0e-38 162.9 154 50.6
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 7.7e-38 161.0 147 54.4
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 7.7e-38 161.0 154 50.6
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 7.7e-38 161.0 144 54.2
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 1.7e-37 159.8 147 52.4
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 2.2e-37 159.5 145 54.5
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 3.8e-37 158.7 143 53.1
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 1.1e-36 157.1 162 49.4
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 1.9e-36 156.4 154 50.0
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 7.2e-36 154.5 148 54.1
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 3.0e-34 149.1 148 53.4
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 5.2e-34 148.3 214 41.1
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 4.4e-33 145.2 143 51.7
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 8.3e-32 141.0 132 52.3
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 1.2e-30 137.1 157 48.4
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 8.0e-27 124.4 156 46.8
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 3.4e-25 119.0 120 47.5
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 4.9e-24 115.2 135 44.4
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 2.9e-21 105.9 136 41.2
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 2.5e-20 102.8 72 65.3
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 3.4e-17 92.4 96 52.1
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 8.3e-16 87.8 57 68.4
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 6.0e-14 81.6 107 42.1
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 6.6e-13 78.2 74 50.0
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 2.1e-11 73.2 118 37.3
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 4.7e-11 72.0 118 37.3
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 3.1e-10 69.3 60 55.0


User provided reference genes

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