Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1502 Ceratophyllum demersum HOM05D005751 ORTHO05D007198 4.2e-36 154.1 73 100.0
CDE02G0045 Ceratophyllum demersum HOM05D005751 ORTHO05D007198 5.2e-34 147.1 73 94.5
CANSAT56G3008 Cannabis sativa HOM05D005751 ORTHO05D007198 9.1e-31 136.3 72 87.5
PSO210G0920 Papaver somniferum HOM05D005751 ORTHO05D007198 2.0e-30 135.2 72 86.1
Zm00001eb032820 Zea mays HOM05D005751 ORTHO05D007198 2.0e-30 135.2 73 84.9
MBI05_g15475_MAGBIO Magnolia biondii HOM05D005751 ORTHO05D007198 2.7e-30 134.8 72 87.5
PSO210G7392 Papaver somniferum HOM05D005751 ORTHO05D007198 3.5e-30 134.4 72 86.1
Ciclev10009538m.g Citrus clementina HOM05D005751 ORTHO05D007198 1.7e-29 132.1 72 84.7
Glyma.13G106600 Glycine max HOM05D005751 ORTHO05D007198 1.7e-29 132.1 72 83.3
MD15G1211500 Malus domestica HOM05D005751 ORTHO05D007198 1.7e-29 132.1 73 84.9
Lj4g0012446 Lotus japonicus HOM05D005751 ORTHO05D007198 2.2e-29 131.7 72 81.9
Cpa.g.sc28.129 Carica papaya HOM05D005751 ORTHO05D007198 2.9e-29 131.3 72 83.3
Nitab4.5_0006861g0030 Nicotiana tabacum HOM05D005751 ORTHO05D007198 2.9e-29 131.3 72 83.3
Oeu051302.1 Olea europaea HOM05D005751 ORTHO05D007198 2.9e-29 131.3 72 83.3
Prupe.7G205300 Prunus persica HOM05D005751 ORTHO05D007198 2.9e-29 131.3 72 83.3
QL02p061913 Quercus lobata HOM05D005751 ORTHO05D007198 2.9e-29 131.3 72 83.3
Sc18g0002310 Simmondsia chinensis HOM05D005751 ORTHO05D007198 2.9e-29 131.3 72 84.7
Aqoxy7G04004 Aquilegia oxysepala HOM05D005751 ORTHO05D007198 3.8e-29 131.0 73 80.8
arahy.Tifrunner.gnm1.ann1.9N5J50 Arachis hypogaea HOM05D005751 ORTHO05D007198 3.8e-29 131.0 72 84.7
arahy.Tifrunner.gnm1.ann1.ZDQ9N1 Arachis hypogaea HOM05D005751 ORTHO05D007198 3.8e-29 131.0 72 84.7
Dinv36789 Davidia involucrata HOM05D005751 ORTHO05D007198 3.8e-29 131.0 72 81.9
Nitab4.5_0001519g0150 Nicotiana tabacum HOM05D005751 ORTHO05D007198 5.0e-29 130.6 72 81.9
Os07g0160400 Oryza sativa ssp. japonica HOM05D005751 ORTHO05D007198 5.0e-29 130.6 73 82.2
TAR624G1021 Trochodendron aralioides HOM05D005751 ORTHO05D007198 5.0e-29 130.6 72 81.9
CiPaw.03G211900 Carya illinoinensis HOM05D005751 ORTHO05D007198 6.5e-29 130.2 72 81.9
AUR62009007 Chenopodium quinoa HOM05D005751 ORTHO05D007198 6.5e-29 130.2 73 82.2
AUR62023295 Chenopodium quinoa HOM05D005751 ORTHO05D007198 6.5e-29 130.2 73 82.2
AUR62044275 Chenopodium quinoa HOM05D005751 ORTHO05D007198 6.5e-29 130.2 73 82.2
Cc06_g11700 Coffea canephora HOM05D005751 ORTHO05D007198 6.5e-29 130.2 72 81.9
CsaV3_1G040650 Cucumis sativus L. HOM05D005751 ORTHO05D007198 6.5e-29 130.2 72 81.9
DCAR_028277 Daucus carota HOM05D005751 ORTHO05D007198 6.5e-29 130.2 72 81.9
ECA234G1336 Erigeron canadensis HOM05D005751 ORTHO05D007198 6.5e-29 130.2 72 81.9
Manes.16G099500 Manihot esculenta HOM05D005751 ORTHO05D007198 6.5e-29 130.2 72 81.9
Solyc07g040950.3 Solanum lycopersicum HOM05D005751 ORTHO05D007198 6.5e-29 130.2 72 81.9
Sopen07g020020 Solanum pennellii HOM05D005751 ORTHO05D007198 6.5e-29 130.2 72 81.9
Aa31LG3G12940 Aethionema arabicum HOM05D005751 ORTHO05D007198 8.5e-29 129.8 73 80.8
Glyma.17G052700 Glycine max HOM05D005751 ORTHO05D007198 8.5e-29 129.8 72 83.3
Lalb_Chr12g0199911 Lupinus albus HOM05D005751 ORTHO05D007198 8.5e-29 129.8 72 80.6
MSTRG.19491 Avicennia marina HOM05D005751 ORTHO05D007198 1.1e-28 129.4 72 81.9
MELO3C015494.2 Cucumis melo HOM05D005751 ORTHO05D007198 1.1e-28 129.4 72 81.9
HanXRQChr12g0354491 Helianthus annuus HOM05D005751 ORTHO05D007198 1.1e-28 129.4 73 79.5
Medtr4g125860 Medicago truncatula HOM05D005751 ORTHO05D007198 1.1e-28 129.4 72 79.2
PGSC0003DMG400010712 Solanum tuberosum HOM05D005751 ORTHO05D007198 1.1e-28 129.4 72 81.9
TWI34G0035 Tripterygium wilfordii HOM05D005751 ORTHO05D007198 1.1e-28 129.4 72 80.6
GSVIVG01015161001 Vitis vinifera HOM05D005751 ORTHO05D007198 1.1e-28 129.4 72 81.9
EL10Ac8g19167 Beta vulgaris HOM05D005751 ORTHO05D007198 1.5e-28 129.0 72 81.9
Haze_25944 Corylus avellana HOM05D005751 ORTHO05D007198 1.5e-28 129.0 72 81.9
Actinidia39706 Actinidia chinensis HOM05D005751 ORTHO05D007198 1.9e-28 128.6 72 81.9
AT5G57040 Arabidopsis thaliana HOM05D005751 ORTHO05D007198 1.9e-28 128.6 73 80.8
Duzib168G1813 Durio zibethinus HOM05D005751 ORTHO05D007198 1.9e-28 128.6 72 80.6
AL8G32950 Arabidopsis lyrata HOM05D005751 ORTHO05D007198 2.5e-28 128.3 73 80.8
BcaB01g04441 Brassica carinata HOM05D005751 ORTHO05D007198 2.5e-28 128.3 73 80.8
CAN.G235.10 Capsicum annuum HOM05D005751 ORTHO05D007198 2.5e-28 128.3 72 80.6
Cfa003053 Carpinus fangiana HOM05D005751 ORTHO05D007198 2.5e-28 128.3 72 81.9
Ca_21296_v3 Cicer arietinum L. HOM05D005751 ORTHO05D007198 2.5e-28 128.3 72 79.2
Hma1.2p1_0169F.1_g074820 Hydrangea macrophylla HOM05D005751 ORTHO05D007198 2.5e-28 128.3 72 80.6
Hma1.2p1_0169F.1_g074830 Hydrangea macrophylla HOM05D005751 ORTHO05D007198 2.5e-28 128.3 72 80.6
Hund08697 Selenicereus undatus HOM05D005751 ORTHO05D007198 2.5e-28 128.3 72 81.9
Carub.0008s1755 Capsella rubella HOM05D005751 ORTHO05D007198 3.2e-28 127.9 73 79.5
COL.COLO4_18163 Corchorus olitorius HOM05D005751 ORTHO05D007198 3.2e-28 127.9 72 80.6
A10p14370 Brassica napus HOM05D005751 ORTHO05D007198 4.2e-28 127.5 73 79.5
Duzib150G0581 Durio zibethinus HOM05D005751 ORTHO05D007198 4.2e-28 127.5 72 80.6
Lsat_1_v5_gn_5_143221 Lactuca sativa HOM05D005751 ORTHO05D007198 4.2e-28 127.5 72 79.2
SGA_v2.0_scaffold91G28064 Striga asiatica HOM05D005751 ORTHO05D007198 4.2e-28 127.5 72 80.6
BcaC04g20019 Brassica carinata HOM05D005751 ORTHO05D007198 5.5e-28 127.1 73 79.5
BolC9t57719H Brassica oleracea HOM05D005751 ORTHO05D007198 5.5e-28 127.1 73 79.5
BraA10t43528Z Brassica rapa HOM05D005751 ORTHO05D007198 5.5e-28 127.1 73 79.5
Thhalv10014727m.g Eutrema salsugineum HOM05D005751 ORTHO05D007198 5.5e-28 127.1 73 79.5
Peaxi162Scf00494g00510 Petunia axillaris HOM05D005751 ORTHO05D007198 5.5e-28 127.1 72 81.9
Phvul.003G134400 Phaseolus vulgaris HOM05D005751 ORTHO05D007198 5.5e-28 127.1 72 79.2
Sed0022874 Sechium edule HOM05D005751 ORTHO05D007198 5.5e-28 127.1 72 80.6
VMungo1215G3373 Vigna mungo HOM05D005751 ORTHO05D007198 5.5e-28 127.1 72 80.6
Eucgr.C03409 Eucalyptus grandis HOM05D005751 ORTHO05D007198 7.2e-28 126.7 72 77.8
Sp6g18760 Schrenkiella parvula HOM05D005751 ORTHO05D007198 7.2e-28 126.7 73 79.5
BcaC01g06463 Brassica carinata HOM05D005751 ORTHO05D007198 9.4e-28 126.3 73 79.5
A03p13000 Brassica napus HOM05D005751 ORTHO05D007198 9.4e-28 126.3 73 79.5
C03p15170 Brassica napus HOM05D005751 ORTHO05D007198 9.4e-28 126.3 73 79.5
BolC3t13958H Brassica oleracea HOM05D005751 ORTHO05D007198 9.4e-28 126.3 73 79.5
BraA03t10610Z Brassica rapa HOM05D005751 ORTHO05D007198 9.4e-28 126.3 73 79.5
Migut.J00571 Erythranthe guttata HOM05D005751 ORTHO05D007198 9.4e-28 126.3 72 80.6
ATR1153G002 Amborella trichopoda HOM05D005751 ORTHO05D007198 1.2e-27 125.9 72 79.2
BcaB08g36014 Brassica carinata HOM05D005751 ORTHO05D007198 1.2e-27 125.9 73 78.1
ClCG03G015400 Citrullus lanatus HOM05D005751 ORTHO05D007198 1.2e-27 125.9 72 80.6
Sabra06G0116100 Salix brachista HOM05D005751 ORTHO05D007198 1.2e-27 125.9 72 80.6
Potri.018G056200 Populus trichocarpa HOM05D005751 ORTHO05D007198 1.6e-27 125.6 72 79.2
FvH4_1g07980 Fragaria vesca HOM05D005751 ORTHO05D007198 2.1e-27 125.2 71 78.9
Gohir.A06G073900 Gossypium hirsutum HOM05D005751 ORTHO05D007198 2.7e-27 124.8 73 78.1
Thecc.09G083800 Theobroma cacao HOM05D005751 ORTHO05D007198 2.7e-27 124.8 72 79.2
CARHR270800 Cardamine hirsuta HOM05D005751 ORTHO05D007198 4.7e-27 124.0 73 76.7
THA.LOC104811753 Tarenaya hassleriana HOM05D005751 ORTHO05D007198 4.7e-27 124.0 73 75.3
vmacro17149 Vaccinium macrocarpon HOM05D005751 ORTHO05D007198 6.1e-27 123.6 71 77.5
Gohir.D06G072800 Gossypium hirsutum HOM05D005751 ORTHO05D007198 8.0e-27 123.2 73 76.7
unitig_0.g2267 Utricularia gibba HOM05D005751 ORTHO05D007198 8.0e-27 123.2 71 77.5
VMungo1215G1838 Vigna mungo HOM05D005751 ORTHO05D007198 8.0e-27 123.2 72 77.8
CSS0015550 Camellia sinensis var. sinensis HOM05D005751 ORTHO05D007198 2.3e-26 121.7 71 74.6
HPP92_020002 Vanilla planifolia HOM05D005751 ORTHO05D007198 3.0e-26 121.3 72 76.4
Mapoly0070s0082 Marchantia polymorpha HOM05D005751 ORTHO05D007198 4.0e-26 120.9 72 75.0
Rhsim05G0015000 Rhododendron simsii HOM05D005751 ORTHO05D007198 6.8e-26 120.2 71 77.5
Pp3c3_33270 Physcomitrium patens HOM05D005751 ORTHO05D007198 8.8e-26 119.8 73 69.9
PGR102G3219 Punica granatum HOM05D005751 ORTHO05D007198 4.4e-25 117.5 72 72.2
SalBow6G2198 Salvia bowleyana HOM05D005751 ORTHO05D007198 5.7e-25 117.1 79 70.9
Ah.09g227980 Amaranthus hybridus HOM05D005751 ORTHO05D007198 2.2e-24 115.2 71 71.8
SMO356G0241 Selaginella moellendorffii HOM05D005751 ORTHO05D007198 2.2e-24 115.2 71 69.0
Pp3c4_10740 Physcomitrium patens HOM05D005751 ORTHO05D007198 1.1e-23 112.8 72 68.1
CBR_g3298 Chara braunii HOM05D005751 ORTHO05D007198 1.8e-23 112.1 72 65.3
Nn6g35546 Nelumbo nucifera HOM05D005751 ORTHO05D007198 2.7e-22 108.2 57 82.5
AagrBONN_evm.TU.Sc2ySwM_228.5761 Anthoceros agrestis HOM05D005751 ORTHO05D007198 8.9e-18 93.2 70 57.1
Cre10.g466500 Chlamydomonas reinhardtii HOM05D005751 ORTHO05D007198 8.9e-18 93.2 72 56.9
PRCOL_00003968 Prasinoderma coloniale HOM05D005751 ORTHO05D007198 2.0e-17 92.0 73 54.8
MCO05G344 Micromonas commoda HOM05D005751 ORTHO05D007198 2.2e-16 88.6 73 52.1
Mapoly0083s0052 Marchantia polymorpha HOM05D005751 ORTHO05D007198 1.8e-15 85.5 71 53.5
Psat0s1725g0120 Pisum sativum HOM05D005751 ORTHO05D007198 4.1e-15 84.3 50 74.0
MD02G1084200 Malus domestica HOM05D005751 ORTHO05D007198 4.6e-14 80.9 44 79.5
FAN28G0463 Fragaria x ananassa HOM05D005751 ORTHO05D007198 1.3e-13 79.3 44 75.0
RcHm_v2.0_Chr2g0093891 Rosa chinensis HOM05D005751 ORTHO05D007198 1.3e-13 79.3 44 75.0
RcHm_v2.0_Chr2g0094011 Rosa chinensis HOM05D005751 ORTHO05D007198 1.3e-13 79.3 44 75.0
Atru.chr7.1637 Acer truncatum HOM05D005751 ORTHO05D007198 1.7e-13 79.0 46 78.3
FAN23G0534 Fragaria x ananassa HOM05D005751 ORTHO05D007198 2.9e-13 78.2 71 59.2
FAN26G0267 Fragaria x ananassa HOM05D005751 ORTHO05D007198 2.9e-13 78.2 71 59.2
FAN26G0888 Fragaria x ananassa HOM05D005751 ORTHO05D007198 2.9e-13 78.2 71 59.2
Mapoly0078s0028 Marchantia polymorpha HOM05D005751 ORTHO05D007198 4.3e-12 74.3 71 46.5
Gohir.A07G143100 Gossypium hirsutum HOM05D005751 ORTHO05D007198 1.6e-11 72.4 45 64.4
AUR62029026 Chenopodium quinoa HOM05D005751 ORTHO05D007198 2.1e-11 72.0 41 75.6
Gorai.010G084800 Gossypium raimondii HOM05D005751 ORTHO05D007198 2.1e-11 72.0 44 68.2
C09p48710 Brassica napus HOM05D005751 ORTHO05D007198 4.7e-11 70.9 41 73.2
TPR.G20403 Trifolium pratense HOM05D005751 ORTHO05D007198 4.7e-11 70.9 37 78.4
SEGI_26166 Sequoiadendron giganteum HOM05D005751 ORTHO05D007198 1.0e-10 69.7 41 70.7
Gohir.A03G138566 Gossypium hirsutum HOM05D005751 ORTHO05D007198 1.2e-09 66.2 45 60.0
FAN19G0250 Fragaria x ananassa HOM05D005751 ORTHO05D007198 5.8e-09 63.9 33 78.8
BcaNung07292 Brassica carinata HOM05D005751 ORTHO05D007198 1.1e-07 59.7 35 71.4


User provided reference genes

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