Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1491 Ceratophyllum demersum HOM05D004604 ORTHO05D005744 5.0e-34 147.1 70 100.0
CDE03G0502 Ceratophyllum demersum HOM05D004604 ORTHO05D005744 1.8e-23 112.1 64 82.8
Gohir.A10G235000 Gossypium hirsutum HOM05D004604 ORTHO05D005744 5.9e-11 70.5 58 55.2
AL3G22760 Arabidopsis lyrata HOM05D004604 ORTHO05D005744 7.7e-11 70.1 60 56.7
Gorai.011G285800 Gossypium raimondii HOM05D004604 ORTHO05D005744 7.7e-11 70.1 58 55.2
Thecc.10G020600 Theobroma cacao HOM05D004604 ORTHO05D005744 7.7e-11 70.1 58 55.2
Sabra10G0146600 Salix brachista HOM05D004604 ORTHO05D005744 1.0e-10 69.7 55 58.2
COL.COLO4_25696 Corchorus olitorius HOM05D004604 ORTHO05D005744 1.3e-10 69.3 51 58.8
MD07G1220300 Malus domestica HOM05D004604 ORTHO05D005744 1.3e-10 69.3 55 58.2
Lj6g0016498 Lotus japonicus HOM05D004604 ORTHO05D005744 2.9e-10 68.2 64 46.9
Glyma.18G028600 Glycine max HOM05D004604 ORTHO05D005744 3.8e-10 67.8 54 51.9
Nn2g11459 Nelumbo nucifera HOM05D004604 ORTHO05D005744 6.5e-10 67.0 66 53.0
Carub.0003s1055 Capsella rubella HOM05D004604 ORTHO05D005744 8.5e-10 66.6 60 58.3
CiPaw.02G191600 Carya illinoinensis HOM05D004604 ORTHO05D005744 8.5e-10 66.6 54 53.7
Phvul.001G241900 Phaseolus vulgaris HOM05D004604 ORTHO05D005744 8.5e-10 66.6 54 48.1
CARHR085800 Cardamine hirsuta HOM05D004604 ORTHO05D005744 1.1e-09 66.2 60 58.3
Psat5g126400 Pisum sativum HOM05D004604 ORTHO05D005744 1.1e-09 66.2 60 48.3
TPR.G2507 Trifolium pratense HOM05D004604 ORTHO05D005744 1.1e-09 66.2 64 50.0
Potri.010G190100 Populus trichocarpa HOM05D004604 ORTHO05D005744 1.5e-09 65.9 49 59.2
TWI73G0703 Tripterygium wilfordii HOM05D004604 ORTHO05D005744 1.5e-09 65.9 57 50.9
Cfa001330 Carpinus fangiana HOM05D004604 ORTHO05D005744 1.9e-09 65.5 61 50.8
Aqoxy4G02603 Aquilegia oxysepala HOM05D004604 ORTHO05D005744 2.5e-09 65.1 67 50.7
Dinv17981 Davidia involucrata HOM05D004604 ORTHO05D005744 2.5e-09 65.1 64 45.3
Migut.F01373 Erythranthe guttata HOM05D004604 ORTHO05D005744 2.5e-09 65.1 49 57.1
VMungo1383G0266 Vigna mungo HOM05D004604 ORTHO05D005744 2.5e-09 65.1 54 50.0
Ca_15268_v3 Cicer arietinum L. HOM05D004604 ORTHO05D005744 3.2e-09 64.7 60 48.3
Oeu048694.1 Olea europaea HOM05D004604 ORTHO05D005744 3.2e-09 64.7 55 52.7
CSS0014761 Camellia sinensis var. sinensis HOM05D004604 ORTHO05D005744 4.2e-09 64.3 63 46.0
Aa31LG3G4550 Aethionema arabicum HOM05D004604 ORTHO05D005744 7.2e-09 63.5 62 48.4
Lj1C953T18 Lonicera japonica HOM05D004604 ORTHO05D005744 7.2e-09 63.5 49 53.1
Prupe.2G248700 Prunus persica HOM05D004604 ORTHO05D005744 7.2e-09 63.5 62 50.0
RcHm_v2.0_Chr1g0369991 Rosa chinensis HOM05D004604 ORTHO05D005744 7.2e-09 63.5 49 55.1
PSO384G4393 Papaver somniferum HOM05D004604 ORTHO05D005744 9.4e-09 63.2 65 52.3
TWI09G1217 Tripterygium wilfordii HOM05D004604 ORTHO05D005744 1.2e-08 62.8 60 50.0
Actinidia33931 Actinidia chinensis HOM05D004604 ORTHO05D005744 1.6e-08 62.4 49 53.1
FvH4_7g24330 Fragaria vesca HOM05D004604 ORTHO05D005744 1.6e-08 62.4 54 50.0
FAN01G3126 Fragaria x ananassa HOM05D004604 ORTHO05D005744 1.6e-08 62.4 54 50.0
FAN03G0827 Fragaria x ananassa HOM05D004604 ORTHO05D005744 1.6e-08 62.4 54 50.0
FAN06G3796 Fragaria x ananassa HOM05D004604 ORTHO05D005744 1.6e-08 62.4 54 50.0
FAN10G0865 Fragaria x ananassa HOM05D004604 ORTHO05D005744 1.6e-08 62.4 54 50.0
Lalb_Chr18g0052631 Lupinus albus HOM05D004604 ORTHO05D005744 1.6e-08 62.4 54 50.0
Medtr3g070310 Medicago truncatula HOM05D004604 ORTHO05D005744 1.6e-08 62.4 62 46.8
PSO339G5386 Papaver somniferum HOM05D004604 ORTHO05D005744 1.6e-08 62.4 65 52.3
GSVIVG01032843001 Vitis vinifera HOM05D004604 ORTHO05D005744 1.6e-08 62.4 64 48.4
arahy.Tifrunner.gnm1.ann1.E2DHW8 Arachis hypogaea HOM05D004604 ORTHO05D005744 2.1e-08 62.0 43 53.5
Lsat_1_v5_gn_2_122780 Lactuca sativa HOM05D004604 ORTHO05D005744 2.1e-08 62.0 66 47.0
PGR044G2346 Punica granatum HOM05D004604 ORTHO05D005744 2.1e-08 62.0 49 53.1
EL10Ac2g04814 Beta vulgaris HOM05D004604 ORTHO05D005744 2.7e-08 61.6 58 48.3
Sp3g09520 Schrenkiella parvula HOM05D004604 ORTHO05D005744 2.7e-08 61.6 60 50.0
Sed0013753 Sechium edule HOM05D004604 ORTHO05D005744 3.6e-08 61.2 61 52.5
Ciclev10030943m.g Citrus clementina HOM05D004604 ORTHO05D005744 4.7e-08 60.8 54 51.9
CANSAT35G0855 Cannabis sativa HOM05D004604 ORTHO05D005744 6.1e-08 60.5 49 55.1
Manes.10G013900 Manihot esculenta HOM05D004604 ORTHO05D005744 6.1e-08 60.5 54 53.7
Ah.16g103410 Amaranthus hybridus HOM05D004604 ORTHO05D005744 8.0e-08 60.1 57 45.6
TAR623G0226 Trochodendron aralioides HOM05D004604 ORTHO05D005744 8.0e-08 60.1 72 44.4
BcaC05g29392 Brassica carinata HOM05D004604 ORTHO05D005744 1.0e-07 59.7 56 53.6
A05p38060 Brassica napus HOM05D004604 ORTHO05D005744 1.0e-07 59.7 56 53.6
C05p56850 Brassica napus HOM05D004604 ORTHO05D005744 1.0e-07 59.7 56 53.6
BolC5t34349H Brassica oleracea HOM05D004604 ORTHO05D005744 1.0e-07 59.7 56 53.6
BraA05t22598Z Brassica rapa HOM05D004604 ORTHO05D005744 1.0e-07 59.7 56 53.6
Dinv34395 Davidia involucrata HOM05D004604 ORTHO05D005744 1.0e-07 59.7 66 45.5
MD01G1132500 Malus domestica HOM05D004604 ORTHO05D005744 1.4e-07 59.3 55 49.1
BcaB06g25636 Brassica carinata HOM05D004604 ORTHO05D005744 1.8e-07 58.9 56 53.6
Cc02_g06650 Coffea canephora HOM05D004604 ORTHO05D005744 1.8e-07 58.9 55 45.5
ECA238G1235 Erigeron canadensis HOM05D004604 ORTHO05D005744 1.8e-07 58.9 48 50.0
HanXRQChr14g0459851 Helianthus annuus HOM05D004604 ORTHO05D005744 2.3e-07 58.5 63 44.4
Aa31LG11G6730 Aethionema arabicum HOM05D004604 ORTHO05D005744 4.0e-07 57.8 48 52.1
Nitab4.5_0000802g0040 Nicotiana tabacum HOM05D004604 ORTHO05D005744 4.0e-07 57.8 49 51.0
Eucgr.J00226 Eucalyptus grandis HOM05D004604 ORTHO05D005744 5.2e-07 57.4 65 46.2
Glyma.11G228500 Glycine max HOM05D004604 ORTHO05D005744 5.2e-07 57.4 54 48.1
THA.LOC104816553 Tarenaya hassleriana HOM05D004604 ORTHO05D005744 5.2e-07 57.4 61 50.8
vmacro06977 Vaccinium macrocarpon HOM05D004604 ORTHO05D005744 5.2e-07 57.4 55 47.3
Eucgr.J00228 Eucalyptus grandis HOM05D004604 ORTHO05D005744 6.7e-07 57.0 63 47.6
Nitab4.5_0005174g0010 Nicotiana tabacum HOM05D004604 ORTHO05D005744 6.7e-07 57.0 49 51.0
ClCG11G006230 Citrullus lanatus HOM05D004604 ORTHO05D005744 8.8e-07 56.6 61 47.5
MELO3C008290.2 Cucumis melo HOM05D004604 ORTHO05D005744 8.8e-07 56.6 61 47.5
CsaV3_6G001760 Cucumis sativus L. HOM05D004604 ORTHO05D005744 8.8e-07 56.6 61 47.5
Peaxi162Scf00825g00019 Petunia axillaris HOM05D004604 ORTHO05D005744 8.8e-07 56.6 49 49.0
CAN.G17.11 Capsicum annuum HOM05D004604 ORTHO05D005744 1.5e-06 55.8 46 50.0
Lalb_Chr15g0084181 Lupinus albus HOM05D004604 ORTHO05D005744 1.5e-06 55.8 59 49.2
Atru.chr12.19 Acer truncatum HOM05D004604 ORTHO05D005744 2.0e-06 55.5 65 46.2
MSTRG.213 Avicennia marina HOM05D004604 ORTHO05D005744 2.0e-06 55.5 62 46.8
Rhsim03G0142100 Rhododendron simsii HOM05D004604 ORTHO05D005744 2.0e-06 55.5 49 49.0
Sp6g37190 Schrenkiella parvula HOM05D004604 ORTHO05D005744 2.0e-06 55.5 48 52.1
Haze_17214 Corylus avellana HOM05D004604 ORTHO05D005744 2.6e-06 55.1 78 38.5
ATR0618G256 Amborella trichopoda HOM05D004604 ORTHO05D005744 3.3e-06 54.7 64 43.8
SGA_v2.0_scaffold76G25082 Striga asiatica HOM05D004604 ORTHO05D005744 4.4e-06 54.3 55 47.3
Pp3c3_24950 Physcomitrium patens HOM05D004604 ORTHO05D005744 5.7e-06 53.9 54 51.9
Sopen06g017720 Solanum pennellii HOM05D004604 ORTHO05D005744 5.7e-06 53.9 64 40.6
TAR369G0014 Trochodendron aralioides HOM05D004604 ORTHO05D005744 5.7e-06 53.9 62 43.5
Solyc06g051760.3 Solanum lycopersicum HOM05D004604 ORTHO05D005744 7.5e-06 53.5 64 39.1
PGSC0003DMG400023817 Solanum tuberosum HOM05D004604 ORTHO05D005744 7.5e-06 53.5 46 50.0
AL6G15600 Arabidopsis lyrata HOM05D004604 ORTHO05D005744 9.7e-06 53.1 61 47.5
HanXRQChr14g0459841 Helianthus annuus HOM05D004604 ORTHO05D005744 9.7e-06 53.1 63 42.9
Zm00001eb348230 Zea mays HOM05D004604 ORTHO05D005744 9.7e-06 53.1 59 39.0


User provided reference genes

Program Settings