Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1482 Ceratophyllum demersum HOM05D006526 ORTHO05D003215 3.4e-77 291.6 148 100.0
CDE06G2358 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 1.8e-17 93.2 69 72.5
CDE05G2481 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 6.0e-13 78.2 66 60.6
CDE05G0752 Ceratophyllum demersum HOM05D006526 ORTHO05D008496 1.3e-12 77.0 62 62.9
Lsat_1_v5_gn_2_93080 Lactuca sativa HOM05D006526 ORTHO05D008496 5.6e-11 71.6 94 44.7
PGR042G1209 Punica granatum HOM05D006526 ORTHO05D008496 3.6e-10 68.9 62 56.5
HanXRQChr14g0450751 Helianthus annuus HOM05D006526 ORTHO05D008496 4.7e-10 68.6 62 58.1
Potri.001G330100 Populus trichocarpa HOM05D006526 ORTHO05D008496 4.7e-10 68.6 62 56.5
Prupe.3G306300 Prunus persica HOM05D006526 ORTHO05D008496 6.2e-10 68.2 69 56.5
Atru.chr6.2570 Acer truncatum HOM05D006526 ORTHO05D008496 8.1e-10 67.8 62 54.8
Actinidia36203 Actinidia chinensis HOM05D006526 ORTHO05D008496 8.1e-10 67.8 58 60.3
Rhsim10G0006300 Rhododendron simsii HOM05D006526 ORTHO05D008496 8.1e-10 67.8 75 50.7
vmacro05958 Vaccinium macrocarpon HOM05D006526 ORTHO05D008496 8.1e-10 67.8 69 52.2
arahy.Tifrunner.gnm1.ann1.4N5YWB Arachis hypogaea HOM05D006526 ORTHO05D008496 1.1e-09 67.4 64 50.0
arahy.Tifrunner.gnm1.ann1.C96CVE Arachis hypogaea HOM05D006526 ORTHO05D008496 1.1e-09 67.4 64 50.0
CiPaw.03G055600 Carya illinoinensis HOM05D006526 ORTHO05D008496 1.1e-09 67.4 67 53.7
Migut.K01466 Erythranthe guttata HOM05D006526 ORTHO05D008496 1.1e-09 67.4 74 48.6
Sabra16G0211400 Salix brachista HOM05D006526 ORTHO05D008496 1.1e-09 67.4 62 56.5
SGA_v2.0_scaffold47G17596 Striga asiatica HOM05D006526 ORTHO05D008496 1.1e-09 67.4 63 55.6
QL02p071428 Quercus lobata HOM05D006526 ORTHO05D008496 1.8e-09 66.6 63 54.0
SalBow7G1947 Salvia bowleyana HOM05D006526 ORTHO05D008496 2.4e-09 66.2 76 48.7
Haze_14876 Corylus avellana HOM05D006526 ORTHO05D008496 3.1e-09 65.9 74 50.0
Actinidia05903 Actinidia chinensis HOM05D006526 ORTHO05D008496 4.0e-09 65.5 58 58.6
Aqoxy3G01551 Aquilegia oxysepala HOM05D006526 ORTHO05D008496 4.0e-09 65.5 59 57.6
COL.COLO4_13261 Corchorus olitorius HOM05D006526 ORTHO05D008496 4.0e-09 65.5 62 54.8
ECA238G1207 Erigeron canadensis HOM05D006526 ORTHO05D008496 4.0e-09 65.5 113 41.6
CSS0005086 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 5.2e-09 65.1 59 55.9
CAN.G473.100 Capsicum annuum HOM05D006526 ORTHO05D008496 5.2e-09 65.1 58 55.2
Cfa007227 Carpinus fangiana HOM05D006526 ORTHO05D008496 5.2e-09 65.1 74 50.0
Dinv33336 Davidia involucrata HOM05D006526 ORTHO05D008496 5.2e-09 65.1 58 55.2
TAR629G1757 Trochodendron aralioides HOM05D006526 ORTHO05D008496 5.2e-09 65.1 76 46.1
HPP92_001419 Vanilla planifolia HOM05D005553 ORTHO05D008496 8.9e-09 64.3 68 50.0
MSTRG.3258 Avicennia marina HOM05D006526 ORTHO05D008496 1.2e-08 63.9 76 47.4
AUR62017828 Chenopodium quinoa HOM05D006526 ORTHO05D008496 1.2e-08 63.9 76 50.0
Eucgr.J02351 Eucalyptus grandis HOM05D006526 ORTHO05D008496 1.2e-08 63.9 64 53.1
FvH4_6g53521 Fragaria vesca HOM05D006526 ORTHO05D008496 1.2e-08 63.9 64 53.1
Lalb_Chr14g0363401 Lupinus albus HOM05D006526 ORTHO05D008496 1.2e-08 63.9 60 51.7
Solyc02g094150.4 Solanum lycopersicum HOM05D006526 ORTHO05D008496 1.2e-08 63.9 58 53.4
Sopen02g038780 Solanum pennellii HOM05D006526 ORTHO05D008496 1.2e-08 63.9 58 53.4
CSS0009464 Camellia sinensis var. sinensis HOM05D006526 ORTHO05D008496 1.5e-08 63.5 58 55.2
CANSAT64G1234 Cannabis sativa HOM05D006526 ORTHO05D008496 1.5e-08 63.5 71 52.1
TWI56G1218 Tripterygium wilfordii HOM05D006526 ORTHO05D008496 1.5e-08 63.5 62 56.5
Ciclev10015967m.g Citrus clementina HOM05D006526 ORTHO05D008496 2.0e-08 63.2 62 50.0
Manes.15G161000 Manihot esculenta HOM05D006526 ORTHO05D008496 2.0e-08 63.2 62 51.6
PSO017G5829 Papaver somniferum HOM05D006526 ORTHO05D008496 2.0e-08 63.2 56 60.7
GSVIVG01033093001 Vitis vinifera HOM05D006526 ORTHO05D008496 2.0e-08 63.2 67 49.3
Nitab4.5_0002050g0140 Nicotiana tabacum HOM05D006526 ORTHO05D008496 2.6e-08 62.8 58 53.4
Phvul.001G093500 Phaseolus vulgaris HOM05D006526 ORTHO05D008496 2.6e-08 62.8 63 55.6
RcHm_v2.0_Chr2g0175561 Rosa chinensis HOM05D006526 ORTHO05D008496 2.6e-08 62.8 94 42.6
Thecc.04G036000 Theobroma cacao HOM05D006526 ORTHO05D008496 2.6e-08 62.8 64 51.6
VMungo1383G1669 Vigna mungo HOM05D006526 ORTHO05D008496 2.6e-08 62.8 63 55.6
ATR0561G126 Amborella trichopoda HOM05D006526 ORTHO05D008496 3.4e-08 62.4 57 56.1
Gohir.D09G036900 Gossypium hirsutum HOM05D006526 ORTHO05D008496 3.4e-08 62.4 62 51.6
Gorai.006G042000 Gossypium raimondii HOM05D006526 ORTHO05D008496 3.4e-08 62.4 62 51.6
Lj1g0010270 Lotus japonicus HOM05D006526 ORTHO05D008496 3.4e-08 62.4 71 49.3
Nitab4.5_0010204g0040 Nicotiana tabacum HOM05D006526 ORTHO05D008496 3.4e-08 62.4 58 53.4
Oeu005097.1 Olea europaea HOM05D006526 ORTHO05D008496 3.4e-08 62.4 58 55.2
Glyma.19G091200 Glycine max HOM05D006526 ORTHO05D008496 4.4e-08 62.0 61 52.5
Psat3g163920 Pisum sativum HOM05D006526 ORTHO05D008496 4.4e-08 62.0 64 50.0
PSO478G2106 Papaver somniferum HOM05D006526 ORTHO05D008496 5.8e-08 61.6 56 58.9
FAN09G0514 Fragaria x ananassa HOM05D002875 ORTHO05D003215 9.9e-08 60.8 64 51.6
AL3G10210 Arabidopsis lyrata HOM05D006526 ORTHO05D008496 1.3e-07 60.5 80 43.8
Duzib147G1379 Durio zibethinus HOM05D006526 ORTHO05D008496 1.3e-07 60.5 62 48.4
Glyma.16G056500 Glycine max HOM05D006526 ORTHO05D008496 1.7e-07 60.1 63 50.8
Lju41C52G13 Lonicera japonica HOM05D002875 ORTHO05D003215 2.2e-07 59.7 80 46.2
FAN05G0398 Fragaria x ananassa HOM05D002875 ORTHO05D003215 3.8e-07 58.9 61 50.8
Peaxi162Scf00420g00560 Petunia axillaris HOM05D006526 ORTHO05D008496 3.8e-07 58.9 71 45.1
TPR.G14866 Trifolium pratense HOM05D006526 ORTHO05D008496 3.8e-07 58.9 91 40.7
AagrBONN_evm.TU.Sc2ySwM_228.1921 Anthoceros agrestis HOM05D006526 ORTHO05D008496 4.9e-07 58.5 58 60.3
ClCG05G013530 Citrullus lanatus HOM05D006526 ORTHO05D008496 8.4e-07 57.8 63 54.0
AT3G01920 Arabidopsis thaliana HOM05D006526 ORTHO05D008496 1.1e-06 57.4 60 48.3
Hma1.2p1_1278F.1_g272280 Hydrangea macrophylla HOM05D006526 ORTHO05D008496 1.1e-06 57.4 58 51.7
Os08g0531300 Oryza sativa ssp. japonica HOM05D006526 ORTHO05D008496 1.9e-06 56.6 58 53.4
MD09G1010800 Malus domestica HOM05D006526 ORTHO05D008496 2.4e-06 56.2 66 51.5
Medtr6g045617 Medicago truncatula HOM05D006526 ORTHO05D008496 2.4e-06 56.2 99 39.4
Medtr7g034590 Medicago truncatula HOM05D006526 ORTHO05D008496 2.4e-06 56.2 91 39.6
Sc16g0003120 Simmondsia chinensis HOM05D006526 ORTHO05D008496 3.2e-06 55.8 60 50.0


User provided reference genes

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