Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1463 Ceratophyllum demersum HOM05D004288 ORTHO05D004997 6.1e-82 307.4 150 100.0
CDE06G1799 Ceratophyllum demersum HOM05D004288 ORTHO05D004997 5.4e-54 214.5 150 76.0
Atru.chr13.813 Acer truncatum HOM05D004288 ORTHO05D004997 3.6e-13 79.0 78 55.1
Actinidia10187 Actinidia chinensis HOM05D004288 ORTHO05D004997 1.0e-12 77.4 110 40.9
Actinidia22683 Actinidia chinensis HOM05D004288 ORTHO05D004997 3.0e-12 75.9 113 42.5
CiPaw.07G176600 Carya illinoinensis HOM05D004288 ORTHO05D004997 6.7e-12 74.7 70 48.6
Aqoxy6G02704 Aquilegia oxysepala HOM05D004288 ORTHO05D004997 1.1e-11 73.9 74 54.1
Ciclev10002881m.g Citrus clementina HOM05D004288 ORTHO05D004997 1.1e-11 73.9 69 50.7
CiPaw.08G113500 Carya illinoinensis HOM05D004288 ORTHO05D004997 4.3e-11 72.0 66 53.0
Rhsim06G0060800 Rhododendron simsii HOM05D004288 ORTHO05D004997 4.3e-11 72.0 68 51.5
RcHm_v2.0_Chr6g0309361 Rosa chinensis HOM05D004288 ORTHO05D004997 4.3e-11 72.0 65 56.9
Cfa013675 Carpinus fangiana HOM05D004288 ORTHO05D004997 5.7e-11 71.6 70 45.7
GSVIVG01009362001 Vitis vinifera HOM05D004288 ORTHO05D004997 7.4e-11 71.2 45 71.1
Thecc.08G091000 Theobroma cacao HOM05D004288 ORTHO05D004997 9.7e-11 70.9 45 71.1
vmacro21447 Vaccinium macrocarpon HOM05D004288 ORTHO05D004997 1.3e-10 70.5 63 52.4
FvH4_2g33280 Fragaria vesca HOM05D004288 ORTHO05D004997 1.7e-10 70.1 55 60.0
FAN24G2538 Fragaria x ananassa HOM05D004288 ORTHO05D004997 1.7e-10 70.1 55 60.0
CiPaw.08G049000 Carya illinoinensis HOM05D004288 ORTHO05D004997 3.7e-10 68.9 71 46.5
Dinv44970 Davidia involucrata HOM05D004288 ORTHO05D004997 3.7e-10 68.9 111 37.8
FAN27G1232 Fragaria x ananassa HOM05D004288 ORTHO05D004997 3.7e-10 68.9 57 57.9
Potri.014G017600 Populus trichocarpa HOM05D004288 ORTHO05D004997 3.7e-10 68.9 77 49.4
PSO541G1266 Papaver somniferum HOM05D004288 ORTHO05D004997 4.8e-10 68.6 69 52.2
Peaxi162Scf00081g01322 Petunia axillaris HOM05D004288 ORTHO05D004997 4.8e-10 68.6 46 65.2
EL10As7g23804 Beta vulgaris HOM05D004288 ORTHO05D004997 8.2e-10 67.8 96 40.6
CiPaw.13G085100 Carya illinoinensis HOM05D004288 ORTHO05D004997 8.2e-10 67.8 71 46.5
Duzib041G0778 Durio zibethinus HOM05D004288 ORTHO05D004997 8.2e-10 67.8 45 68.9
Duzib116G0008 Durio zibethinus HOM05D004288 ORTHO05D004997 8.2e-10 67.8 45 68.9
Hma1.2p1_0210F.1_g089620 Hydrangea macrophylla HOM05D004288 ORTHO05D004997 8.2e-10 67.8 72 47.2
Prupe.1G424700 Prunus persica HOM05D004288 ORTHO05D004997 8.2e-10 67.8 65 50.8
CDE04G1843 Ceratophyllum demersum HOM05D004288 ORTHO05D004997 1.1e-09 67.4 53 58.5
Haze_22316 Corylus avellana HOM05D004288 ORTHO05D004997 1.1e-09 67.4 68 47.1
PSO675G1665 Papaver somniferum HOM05D004288 ORTHO05D004997 1.4e-09 67.0 103 39.8
TAR376G0993 Trochodendron aralioides HOM05D004288 ORTHO05D004997 1.4e-09 67.0 74 51.4
Actinidia38098 Actinidia chinensis HOM05D004288 ORTHO05D004997 1.8e-09 66.6 127 37.0
MELO3C016806.2 Cucumis melo HOM05D004288 ORTHO05D004997 1.8e-09 66.6 66 51.5
MBI16_g22811_MAGBIO Magnolia biondii HOM05D004288 ORTHO05D004997 1.8e-09 66.6 118 39.0
Nitab4.5_0011511g0010 Nicotiana tabacum HOM05D004288 ORTHO05D004997 1.8e-09 66.6 70 50.0
PGSC0003DMG400021529 Solanum tuberosum HOM05D004288 ORTHO05D004997 1.8e-09 66.6 60 56.7
TWI12G0116 Tripterygium wilfordii HOM05D004288 ORTHO05D004997 1.8e-09 66.6 73 47.9
Sed0012219 Sechium edule HOM05D004288 ORTHO05D004997 2.4e-09 66.2 86 43.0
Solyc12g088410.3 Solanum lycopersicum HOM05D004288 ORTHO05D004997 2.4e-09 66.2 124 38.7
CiPaw.04G152800 Carya illinoinensis HOM05D004288 ORTHO05D004997 3.1e-09 65.9 71 45.1
Eucgr.F00116 Eucalyptus grandis HOM05D004288 ORTHO05D004997 3.1e-09 65.9 47 57.4
FAN20G2816 Fragaria x ananassa HOM05D004288 ORTHO05D004997 3.1e-09 65.9 57 56.1
MD15G1071700 Malus domestica HOM05D004288 ORTHO05D004997 3.1e-09 65.9 65 50.8
Sabra14G0011500 Salix brachista HOM05D004288 ORTHO05D004997 3.1e-09 65.9 77 50.6
MELO3C032376.2 Cucumis melo HOM05D004288 ORTHO05D004997 4.1e-09 65.5 47 59.6
FAN15G0972 Fragaria x ananassa HOM05D004288 ORTHO05D004997 4.1e-09 65.5 57 56.1
Phvul.001G026500 Phaseolus vulgaris HOM05D004288 ORTHO05D004997 4.1e-09 65.5 72 52.8
CANSAT25G2350 Cannabis sativa HOM05D004288 ORTHO05D004997 5.3e-09 65.1 78 41.0
CsaV3_4G034910 Cucumis sativus L. HOM05D004288 ORTHO05D003449 5.3e-09 65.1 87 43.7
Gohir.A05G208400 Gossypium hirsutum HOM05D004288 ORTHO05D004997 6.9e-09 64.7 80 45.0
QL12p037641 Quercus lobata HOM05D004288 ORTHO05D004997 6.9e-09 64.7 74 40.5
CAN.G107.3 Capsicum annuum HOM05D004288 ORTHO05D004997 9.1e-09 64.3 72 51.4
Rhsim07G0221200 Rhododendron simsii HOM05D004288 ORTHO05D004997 9.1e-09 64.3 72 45.8
SalBow6G1935 Salvia bowleyana HOM05D004288 ORTHO05D004997 9.1e-09 64.3 46 60.9
SalBow8G0960 Salvia bowleyana HOM05D004288 ORTHO05D004997 9.1e-09 64.3 46 60.9
PGSC0003DMG401011559 Solanum tuberosum HOM05D004288 ORTHO05D004997 9.1e-09 64.3 79 46.8
Cpa.g.sc21.102 Carica papaya HOM05D004288 ORTHO05D004997 1.2e-08 63.9 46 63.0
Gohir.D05G211900 Gossypium hirsutum HOM05D004288 ORTHO05D004997 1.2e-08 63.9 78 39.7
Gorai.009G218500 Gossypium raimondii HOM05D004288 ORTHO05D004997 1.2e-08 63.9 78 39.7
Solyc04g078010.4 Solanum lycopersicum HOM05D004288 ORTHO05D004997 1.2e-08 63.9 91 41.8
Sopen12g030390 Solanum pennellii HOM05D004288 ORTHO05D004997 1.2e-08 63.9 58 56.9
MD08G1087000 Malus domestica HOM05D004288 ORTHO05D004997 1.5e-08 63.5 46 60.9
Sed0026714 Sechium edule HOM05D004288 ORTHO05D004997 1.5e-08 63.5 48 60.4
Peaxi162Scf00160g00120 Petunia axillaris HOM05D004288 ORTHO05D004997 2.0e-08 63.2 83 43.4
Sc02g0007800 Simmondsia chinensis HOM05D003189 ORTHO05D003449 2.0e-08 63.2 69 50.7
TAR628G0045 Trochodendron aralioides HOM05D004288 ORTHO05D004997 2.0e-08 63.2 67 53.7
Migut.C00495 Erythranthe guttata HOM05D004288 ORTHO05D004997 2.6e-08 62.8 46 63.0
Nn1g04602 Nelumbo nucifera HOM05D004288 ORTHO05D004997 2.6e-08 62.8 108 39.8
Sed0005367 Sechium edule HOM05D004288 ORTHO05D004997 2.6e-08 62.8 111 36.0
Sopen04g031610 Solanum pennellii HOM05D004288 ORTHO05D004997 2.6e-08 62.8 86 41.9
SGA_v2.0_scaffold14G06935 Striga asiatica HOM05D004288 ORTHO05D004997 2.6e-08 62.8 73 45.2
TAR636G2516 Trochodendron aralioides HOM05D004288 ORTHO05D004997 2.6e-08 62.8 66 50.0
ClCG05G020460 Citrullus lanatus HOM05D004288 ORTHO05D004997 3.4e-08 62.4 66 50.0
Hma1.2p1_0819F.1_g223820 Hydrangea macrophylla HOM05D004288 ORTHO05D004997 3.4e-08 62.4 64 46.9
SalBow7G4748 Salvia bowleyana HOM05D004288 ORTHO05D004997 4.5e-08 62.0 40 62.5
Nitab4.5_0000569g0070 Nicotiana tabacum HOM05D004288 ORTHO05D004997 7.7e-08 61.2 52 55.8
GSVIVG01037855001 Vitis vinifera HOM05D004288 ORTHO05D004997 7.7e-08 61.2 55 56.4
ClCG05G020480 Citrullus lanatus HOM05D004288 ORTHO05D004997 1.0e-07 60.8 66 47.0
TWI56G0562 Tripterygium wilfordii HOM05D004288 ORTHO05D004997 1.0e-07 60.8 44 59.1
CANSAT54G1812 Cannabis sativa HOM05D004288 ORTHO05D004997 1.3e-07 60.5 37 67.6
Nitab4.5_0000934g0110 Nicotiana tabacum HOM05D004288 ORTHO05D004997 1.3e-07 60.5 56 50.0
Ah.05g167180 Amaranthus hybridus HOM05D004288 ORTHO05D004997 1.7e-07 60.1 65 49.2
COL.COLO4_28524 Corchorus olitorius HOM05D004288 ORTHO05D004997 1.7e-07 60.1 43 65.1
Gohir.A06G023200 Gossypium hirsutum HOM05D004288 ORTHO05D004997 1.7e-07 60.1 81 46.9
Manes.18G045000 Manihot esculenta HOM05D004288 ORTHO05D004997 1.7e-07 60.1 69 49.3
DCAR_012811 Daucus carota HOM05D004288 ORTHO05D004997 2.2e-07 59.7 61 47.5
Hund14391 Selenicereus undatus HOM05D004288 ORTHO05D004997 2.2e-07 59.7 49 57.1
THA.LOC104825767 Tarenaya hassleriana HOM05D004288 ORTHO05D004997 2.2e-07 59.7 70 45.7
Glyma.14G087800 Glycine max HOM05D004288 ORTHO05D004997 2.9e-07 59.3 69 50.7
Aqoxy5G00895 Aquilegia oxysepala HOM05D003189 ORTHO05D003449 3.8e-07 58.9 47 59.6
Nitab4.5_0014410g0020 Nicotiana tabacum HOM05D004288 ORTHO05D004997 3.8e-07 58.9 45 55.6
THA.LOC104801605 Tarenaya hassleriana HOM05D004288 ORTHO05D004997 3.8e-07 58.9 71 39.4
Gohir.D06G020400 Gossypium hirsutum HOM05D004288 ORTHO05D004997 5.0e-07 58.5 81 46.9
MSTRG.1030 Avicennia marina HOM05D004288 ORTHO05D004997 6.5e-07 58.2 51 54.9
MSTRG.22227 Avicennia marina HOM05D004288 ORTHO05D004997 6.5e-07 58.2 115 34.8
CSS0041913 Camellia sinensis var. sinensis HOM05D004288 ORTHO05D004997 6.5e-07 58.2 51 49.0
Cc10_g05620 Coffea canephora HOM05D004288 ORTHO05D004997 6.5e-07 58.2 75 41.3
HanXRQChr01g0027971 Helianthus annuus HOM05D004288 ORTHO05D004997 6.5e-07 58.2 49 53.1
Carub.0006s0080 Capsella rubella HOM05D004288 ORTHO05D004997 8.5e-07 57.8 44 63.6
Gorai.010G024900 Gossypium raimondii HOM05D004288 ORTHO05D004997 8.5e-07 57.8 52 63.5
TAR381G1169 Trochodendron aralioides HOM05D004288 ORTHO05D004997 8.5e-07 57.8 60 46.7
HanXRQChr11g0341661 Helianthus annuus HOM05D004288 ORTHO05D004997 1.1e-06 57.4 73 42.5
AT5G01075 Arabidopsis thaliana HOM05D004288 ORTHO05D004997 1.4e-06 57.0 56 57.1
Os03g0206201 Oryza sativa ssp. japonica HOM05D004288 ORTHO05D004997 1.4e-06 57.0 70 41.4
Ciclev10029597m.g Citrus clementina HOM05D004288 ORTHO05D004997 2.5e-06 56.2 71 50.7
Thhalv10015166m.g Eutrema salsugineum HOM05D004288 ORTHO05D004997 2.5e-06 56.2 48 58.3
Glyma.17G236500 Glycine max HOM05D004288 ORTHO05D004997 2.5e-06 56.2 52 57.7
HanXRQChr09g0266571 Helianthus annuus HOM05D004288 ORTHO05D004997 2.5e-06 56.2 71 45.1
CSS0005181 Camellia sinensis var. sinensis HOM05D004288 ORTHO05D004997 3.2e-06 55.8 51 49.0
Lsat_1_v5_gn_4_130821 Lactuca sativa HOM05D004288 ORTHO05D004997 4.2e-06 55.5 45 60.0
Oeu057368.1 Olea europaea HOM05D004288 ORTHO05D004997 5.5e-06 55.1 81 40.7
ECA232G2356 Erigeron canadensis HOM05D004288 ORTHO05D004997 7.2e-06 54.7 45 57.8
SGA_v2.0_scaffold238G43969 Striga asiatica HOM05D004288 ORTHO05D004997 7.2e-06 54.7 36 63.9


User provided reference genes

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