Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1456 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 2.3e-67 258.8 136 100.0
CDE02G2775 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 1.3e-27 126.7 64 98.4
Rhsim08G0032100 Rhododendron simsii HOM05D005052 ORTHO05D006226 2.6e-23 112.5 78 69.2
MBI05_g23388_MAGBIO Magnolia biondii HOM05D005052 ORTHO05D006226 4.5e-23 111.7 76 75.0
vmacro18426 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 7.6e-23 110.9 78 67.9
PSO541G6199 Papaver somniferum HOM05D005052 ORTHO05D006226 1.0e-22 110.5 74 75.7
PSO675G6089 Papaver somniferum HOM05D005052 ORTHO05D006226 1.0e-22 110.5 74 75.7
Nn5g28565 Nelumbo nucifera HOM05D005052 ORTHO05D006226 1.7e-22 109.8 73 71.2
Nn1g06262 Nelumbo nucifera HOM05D005052 ORTHO05D006226 5.0e-22 108.2 77 71.4
MD15G1242600 Malus domestica HOM05D005052 ORTHO05D006226 8.5e-22 107.5 73 71.2
TAR381G1626 Trochodendron aralioides HOM05D005052 ORTHO05D006226 1.4e-21 106.7 77 70.1
Manes.02G107200 Manihot esculenta HOM05D005052 ORTHO05D006226 1.9e-21 106.3 73 68.5
Sc03g0003700 Simmondsia chinensis HOM05D005052 ORTHO05D006226 1.9e-21 106.3 74 74.3
Cc07_g11060 Coffea canephora HOM05D005052 ORTHO05D006226 2.5e-21 105.9 73 68.5
EL10Ac6g15523 Beta vulgaris HOM05D005052 ORTHO05D006226 3.2e-21 105.5 76 72.4
CAN.G1274.31 Capsicum annuum HOM05D005052 ORTHO05D006226 4.2e-21 105.1 83 60.2
Lj2g0011110 Lotus japonicus HOM05D005052 ORTHO05D006226 5.5e-21 104.8 79 65.8
Nitab4.5_0008943g0020 Nicotiana tabacum HOM05D005052 ORTHO05D006226 5.5e-21 104.8 96 54.2
RcHm_v2.0_Chr2g0099021 Rosa chinensis HOM05D005052 ORTHO05D006226 5.5e-21 104.8 76 67.1
GSVIVG01018732001 Vitis vinifera HOM05D005052 ORTHO05D006226 5.5e-21 104.8 75 69.3
CiPaw.07G061100 Carya illinoinensis HOM05D005052 ORTHO05D006226 7.2e-21 104.4 73 68.5
Zm00001eb331970 Zea mays HOM05D005052 ORTHO05D006226 7.2e-21 104.4 64 81.2
Atru.chr3.855 Acer truncatum HOM05D005052 ORTHO05D006226 9.4e-21 104.0 94 55.3
Lalb_Chr09g0321611 Lupinus albus HOM05D005052 ORTHO05D006226 9.4e-21 104.0 129 50.4
Medtr5g022580 Medicago truncatula HOM05D005052 ORTHO05D006226 9.4e-21 104.0 88 62.5
Nitab4.5_0001892g0080 Nicotiana tabacum HOM05D005052 ORTHO05D006226 9.4e-21 104.0 81 59.3
HPP92_025909 Vanilla planifolia HOM05D005052 ORTHO05D006226 9.4e-21 104.0 73 71.2
COL.COLO4_22462 Corchorus olitorius HOM05D005052 ORTHO05D006226 1.2e-20 103.6 77 63.6
Dinv40116 Davidia involucrata HOM05D005052 ORTHO05D006226 1.2e-20 103.6 73 68.5
Os09g0539100 Oryza sativa ssp. japonica HOM05D005052 ORTHO05D006226 1.6e-20 103.2 75 68.0
Sopen02g028370 Solanum pennellii HOM05D005052 ORTHO05D006226 1.6e-20 103.2 73 63.0
PGSC0003DMG400003582 Solanum tuberosum HOM05D005052 ORTHO05D006226 1.6e-20 103.2 73 63.0
TPR.G10542 Trifolium pratense HOM05D005052 ORTHO05D006226 1.6e-20 103.2 121 51.2
Gorai.007G192400 Gossypium raimondii HOM05D005052 ORTHO05D006226 2.1e-20 102.8 73 63.0
Prupe.7G171600 Prunus persica HOM05D005052 ORTHO05D006226 2.1e-20 102.8 75 65.3
Thecc.01G014600 Theobroma cacao HOM05D005052 ORTHO05D006226 2.1e-20 102.8 73 65.8
Zm00001eb103800 Zea mays HOM05D005052 ORTHO05D006226 2.1e-20 102.8 64 79.7
Actinidia28717 Actinidia chinensis HOM05D005052 ORTHO05D006226 2.7e-20 102.4 74 68.9
Ah.03g149130 Amaranthus hybridus HOM05D005052 ORTHO05D006226 3.6e-20 102.1 88 61.4
Migut.C00533 Erythranthe guttata HOM05D005052 ORTHO05D006226 3.6e-20 102.1 71 66.2
Gohir.A11G173500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 3.6e-20 102.1 73 63.0
HPP92_025914 Vanilla planifolia HOM05D005052 ORTHO05D006226 3.6e-20 102.1 73 69.9
Dinv33662 Davidia involucrata HOM05D005052 ORTHO05D006226 4.6e-20 101.7 73 67.1
Potri.005G110900 Populus trichocarpa HOM05D005052 ORTHO05D006226 6.1e-20 101.3 75 66.7
Solyc02g083590.3 Solanum lycopersicum HOM05D005052 ORTHO05D006226 6.1e-20 101.3 73 61.6
CsaV3_3G000670 Cucumis sativus L. HOM05D005052 ORTHO05D006226 7.9e-20 100.9 79 60.8
Cpa.g.sc6.286 Carica papaya HOM05D005052 ORTHO05D006226 1.0e-19 100.5 75 64.0
ClCG10G000590 Citrullus lanatus HOM05D005052 ORTHO05D006226 1.0e-19 100.5 79 59.5
MELO3C013755.2 Cucumis melo HOM05D005052 ORTHO05D006226 1.0e-19 100.5 79 59.5
Lsat_1_v5_gn_3_125660 Lactuca sativa HOM05D005052 ORTHO05D006226 1.0e-19 100.5 87 59.8
Psat2g153160 Pisum sativum HOM05D005052 ORTHO05D006226 1.0e-19 100.5 121 48.8
Sed0003793 Sechium edule HOM05D005052 ORTHO05D006226 1.0e-19 100.5 77 62.3
HanXRQChr13g0424561 Helianthus annuus HOM05D005052 ORTHO05D006226 1.4e-19 100.1 90 55.6
QL06p051082 Quercus lobata HOM05D005052 ORTHO05D006226 1.4e-19 100.1 80 62.5
AUR62003338 Chenopodium quinoa HOM05D005052 ORTHO05D006226 1.8e-19 99.8 82 63.4
Eucgr.J02467 Eucalyptus grandis HOM05D005052 ORTHO05D006226 1.8e-19 99.8 72 63.9
Lj4A222T51 Lonicera japonica HOM05D005052 ORTHO05D006226 1.8e-19 99.8 99 57.6
Peaxi162Scf00328g00523 Petunia axillaris HOM05D005052 ORTHO05D006226 1.8e-19 99.8 87 55.2
Duzib147G0491 Durio zibethinus HOM05D005052 ORTHO05D006226 2.3e-19 99.4 77 62.3
Hund16503 Selenicereus undatus HOM05D005052 ORTHO05D006226 2.3e-19 99.4 84 64.3
TWI53G1960 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 2.3e-19 99.4 74 62.2
ATR0712G043 Amborella trichopoda HOM05D005052 ORTHO05D006226 3.9e-19 98.6 78 62.8
Gohir.D12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 3.9e-19 98.6 73 63.0
Gorai.008G062200 Gossypium raimondii HOM05D005052 ORTHO05D006226 3.9e-19 98.6 73 63.0
VMungo1215G2918 Vigna mungo HOM05D005052 ORTHO05D006226 3.9e-19 98.6 75 62.7
arahy.Tifrunner.gnm1.ann1.1KVD1S Arachis hypogaea HOM05D005052 ORTHO05D006226 5.1e-19 98.2 76 68.4
arahy.Tifrunner.gnm1.ann1.PYN71E Arachis hypogaea HOM05D005052 ORTHO05D006226 5.1e-19 98.2 76 68.4
Ca_24920_v3 Cicer arietinum L. HOM05D005052 ORTHO05D006226 5.1e-19 98.2 108 53.7
FAN28G0876 Fragaria x ananassa HOM05D005052 ORTHO05D006226 5.1e-19 98.2 76 63.2
Glyma.11G078700 Glycine max HOM05D005052 ORTHO05D006226 5.1e-19 98.2 76 61.8
Sabra05G0090900 Salix brachista HOM05D005052 ORTHO05D006226 5.1e-19 98.2 126 48.4
Gohir.A12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 6.7e-19 97.8 71 64.8
Cfa007001 Carpinus fangiana HOM05D005052 ORTHO05D006226 8.8e-19 97.4 74 59.5
Haze_03731 Corylus avellana HOM05D005052 ORTHO05D006226 8.8e-19 97.4 74 59.5
THA.LOC104821339 Tarenaya hassleriana HOM05D005052 ORTHO05D006226 8.8e-19 97.4 73 64.4
CANSAT25G2560 Cannabis sativa HOM05D005052 ORTHO05D006226 1.1e-18 97.1 82 59.8
Glyma.01G164300 Glycine max HOM05D005052 ORTHO05D006226 1.1e-18 97.1 76 63.2
Lalb_Chr05g0212261 Lupinus albus HOM05D005052 ORTHO05D006226 1.1e-18 97.1 130 48.5
Actinidia22954 Actinidia chinensis HOM05D005052 ORTHO05D006226 1.5e-18 96.7 52 84.6
AagrBONN_evm.TU.Sc2ySwM_340.387 Anthoceros agrestis HOM05D005052 ORTHO05D006226 1.5e-18 96.7 73 63.0
BcaB04g20124 Brassica carinata HOM05D005052 ORTHO05D006226 1.5e-18 96.7 88 58.0
AUR62029500 Chenopodium quinoa HOM05D005052 ORTHO05D006226 1.5e-18 96.7 85 60.0
FvH4_1g11430 Fragaria vesca HOM05D005052 ORTHO05D006226 1.5e-18 96.7 76 61.8
Oeu048477.1 Olea europaea HOM05D005052 ORTHO05D006226 1.5e-18 96.7 73 67.1
FAN26G3360 Fragaria x ananassa HOM05D005052 ORTHO05D006226 1.9e-18 96.3 76 61.8
ECA240G3065 Erigeron canadensis HOM05D005052 ORTHO05D006226 2.5e-18 95.9 84 60.7
Hma1.2p1_0315F.1_g122330 Hydrangea macrophylla HOM05D005052 ORTHO05D006226 2.5e-18 95.9 67 65.7
SGA_v2.0_scaffold94G28549 Striga asiatica HOM05D005052 ORTHO05D006226 2.5e-18 95.9 107 51.4
unitig_699.g19703 Utricularia gibba HOM05D005052 ORTHO05D006226 2.5e-18 95.9 73 65.8
AL8G45470 Arabidopsis lyrata HOM05D005052 ORTHO05D006226 4.3e-18 95.1 120 45.8
SEGI_14262 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 4.3e-18 95.1 78 55.1
Aqoxy4G02022 Aquilegia oxysepala HOM05D005052 ORTHO05D006226 5.7e-18 94.7 56 76.8
Gohir.D11G180500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 7.4e-18 94.4 64 68.8
PGR102G0465 Punica granatum HOM05D005052 ORTHO05D006226 9.7e-18 94.0 88 60.2
MSTRG.2728 Avicennia marina HOM05D005052 ORTHO05D006226 1.3e-17 93.6 53 83.0
CARHR281630 Cardamine hirsuta HOM05D005052 ORTHO05D006226 1.3e-17 93.6 71 64.8
SalBow3G4284 Salvia bowleyana HOM05D005052 ORTHO05D006226 1.3e-17 93.6 76 64.5
Thhalv10004219m.g Eutrema salsugineum HOM05D005052 ORTHO05D006226 1.7e-17 93.2 72 62.5
Carub.0008s2837 Capsella rubella HOM05D005052 ORTHO05D006226 2.8e-17 92.4 75 62.7
TWI09G1579 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 3.7e-17 92.0 74 58.1
DCAR_022909 Daucus carota HOM05D005052 ORTHO05D006226 6.3e-17 91.3 77 61.0
Phvul.002G106700 Phaseolus vulgaris HOM05D005052 ORTHO05D006226 6.3e-17 91.3 76 60.5
Aa31LG1G14600 Aethionema arabicum HOM05D005052 ORTHO05D006226 8.2e-17 90.9 65 63.1
CiPaw.08G130500 Carya illinoinensis HOM05D005052 ORTHO05D006226 8.2e-17 90.9 73 61.6
Sp2g30570 Schrenkiella parvula HOM05D005052 ORTHO05D006226 8.2e-17 90.9 85 56.5
BcaC04g23113 Brassica carinata HOM05D005052 ORTHO05D006226 1.1e-16 90.5 89 57.3
C09p12030 Brassica napus HOM05D005052 ORTHO05D006226 1.1e-16 90.5 89 57.3
BolC9t54093H Brassica oleracea HOM05D005052 ORTHO05D006226 1.1e-16 90.5 89 57.3
A09p10150 Brassica napus HOM05D005052 ORTHO05D006226 1.4e-16 90.1 89 57.3
BraA09t36659Z Brassica rapa HOM05D005052 ORTHO05D006226 1.4e-16 90.1 89 57.3
FAN19G0738 Fragaria x ananassa HOM05D005052 ORTHO05D006226 1.4e-16 90.1 76 60.5
Ciclev10025711m.g Citrus clementina HOM05D005052 ORTHO05D006226 1.8e-16 89.7 75 60.0
SMO228G0049 Selaginella moellendorffii HOM05D005052 ORTHO05D006226 1.8e-16 89.7 51 80.4
FAN23G2381 Fragaria x ananassa HOM05D005052 ORTHO05D006226 2.4e-16 89.4 77 62.3
Mapoly0031s0094 Marchantia polymorpha HOM05D005052 ORTHO05D006226 2.4e-16 89.4 53 77.4
AT5G66120 Arabidopsis thaliana HOM05D005052 ORTHO05D006226 6.9e-16 87.8 129 43.4
CBR_g10969 Chara braunii HOM05D005052 ORTHO05D006226 6.9e-16 87.8 83 54.2
DCAR_004732 Daucus carota HOM05D005052 ORTHO05D006226 6.9e-16 87.8 62 66.1
Cre08.g368950 Chlamydomonas reinhardtii HOM05D005052 ORTHO05D006226 1.3e-14 83.6 64 59.4
Pp3c13_24150 Physcomitrium patens HOM05D005052 ORTHO05D006226 6.5e-14 81.3 73 52.1
SGA_v2.0_scaffold273G46395 Striga asiatica HOM05D005052 ORTHO05D006226 6.5e-14 81.3 53 67.9
PRCOL_00000314 Prasinoderma coloniale HOM05D005052 ORTHO05D006226 1.1e-13 80.5 63 57.1
MCO01G625 Micromonas commoda HOM05D005052 ORTHO05D006226 4.2e-13 78.6 51 68.6
vmacro22193 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 1.6e-12 76.6 137 37.2
CSS0040013 Camellia sinensis var. sinensis HOM05D005052 ORTHO05D006226 2.9e-06 55.8 32 75.0


User provided reference genes

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