Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1444 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 1.2e-163 579.7 284 100.0
CDE06G2540 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 4.1e-103 378.6 210 90.0
Aqoxy1G01228 Aquilegia oxysepala HOM05D002510 ORTHO05D006928 1.8e-90 336.7 267 62.9
arahy.Tifrunner.gnm1.ann1.D0MVTX Arachis hypogaea HOM05D002510 ORTHO05D006928 4.0e-90 335.5 271 61.6
Potri.008G039300 Populus trichocarpa HOM05D002510 ORTHO05D006928 6.8e-90 334.7 233 68.7
Nn2g10810 Nelumbo nucifera HOM05D002510 ORTHO05D006928 1.5e-89 333.6 226 69.9
Sabra08G0027000 Salix brachista HOM05D002510 ORTHO05D006928 7.5e-89 331.3 228 69.3
arahy.Tifrunner.gnm1.ann1.B5KM0B Arachis hypogaea HOM05D002510 ORTHO05D006928 1.7e-88 330.1 268 61.9
Manes.07G100200 Manihot esculenta HOM05D002510 ORTHO05D006928 2.9e-88 329.3 231 67.5
Thecc.10G074800 Theobroma cacao HOM05D002510 ORTHO05D006928 4.9e-88 328.6 229 68.6
TAR369G0428 Trochodendron aralioides HOM05D002510 ORTHO05D006928 4.9e-88 328.6 284 58.8
FAN10G3768 Fragaria x ananassa HOM05D002510 ORTHO05D007210 6.4e-88 328.2 273 59.0
Duzib114G0372 Durio zibethinus HOM05D002510 ORTHO05D006928 8.3e-88 327.8 229 68.6
FAN01G2940 Fragaria x ananassa HOM05D002510 ORTHO05D007210 1.1e-87 327.4 271 59.8
FAN06G0282 Fragaria x ananassa HOM05D002510 ORTHO05D006928 1.1e-87 327.4 273 59.3
Dinv31320 Davidia involucrata HOM05D002510 ORTHO05D006928 1.4e-87 327.0 281 59.4
TWI15G0405 Tripterygium wilfordii HOM05D002510 ORTHO05D006928 1.4e-87 327.0 233 67.8
FvH4_7g19440 Fragaria vesca HOM05D002510 ORTHO05D006928 2.4e-87 326.2 273 59.0
FAN10G0968 Fragaria x ananassa HOM05D002510 ORTHO05D007210 3.2e-87 325.9 235 65.1
Lj5g0027397 Lotus japonicus HOM05D002510 ORTHO05D006928 3.2e-87 325.9 274 60.2
Glyma.10G210800 Glycine max HOM05D002510 ORTHO05D006928 4.1e-87 325.5 234 66.7
PSO063G7611 Papaver somniferum HOM05D002510 ORTHO05D006928 4.1e-87 325.5 232 66.4
PSO339G5277 Papaver somniferum HOM05D002510 ORTHO05D006928 5.4e-87 325.1 232 66.8
Potri.010G222900 Populus trichocarpa HOM05D002510 ORTHO05D006928 5.4e-87 325.1 232 66.8
Sc20g0001820 Simmondsia chinensis HOM05D002510 ORTHO05D006928 5.4e-87 325.1 246 66.3
HPP92_014717 Vanilla planifolia HOM05D002510 ORTHO05D006928 5.4e-87 325.1 274 59.1
FAN03G1741 Fragaria x ananassa HOM05D002510 ORTHO05D006928 7.0e-87 324.7 245 63.3
Gohir.A10G205600 Gossypium hirsutum HOM05D002510 ORTHO05D006928 7.0e-87 324.7 226 67.7
Lj1C913T4 Lonicera japonica HOM05D002510 ORTHO05D006928 9.2e-87 324.3 227 67.4
Phvul.007G094800 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 1.6e-86 323.6 233 66.5
Glyma.20G179800 Glycine max HOM05D002510 ORTHO05D006928 2.7e-86 322.8 234 67.1
RcHm_v2.0_Chr1g0363321 Rosa chinensis HOM05D002510 ORTHO05D006928 2.7e-86 322.8 232 65.5
Duzib128G0305 Durio zibethinus HOM05D002510 ORTHO05D006928 4.6e-86 322.0 249 63.5
CiPaw.01G272400 Carya illinoinensis HOM05D002510 ORTHO05D006928 7.8e-86 321.2 227 67.4
Medtr1g095000 Medicago truncatula HOM05D002510 ORTHO05D006928 7.8e-86 321.2 228 67.5
Psat6g183480 Pisum sativum HOM05D002510 ORTHO05D006928 7.8e-86 321.2 246 63.8
Eucgr.G02836 Eucalyptus grandis HOM05D002510 ORTHO05D006928 1.0e-85 320.9 221 68.3
Prupe.2G213200 Prunus persica HOM05D002510 ORTHO05D006928 1.3e-85 320.5 229 65.1
GSVIVG01016268001 Vitis vinifera HOM05D002510 ORTHO05D006928 1.7e-85 320.1 233 63.9
QL08p055746 Quercus lobata HOM05D002510 ORTHO05D006928 2.3e-85 319.7 228 66.7
Ca_10569_v3 Cicer arietinum L. HOM05D002800 ORTHO05D008563 3.9e-85 318.9 225 68.4
Cc02_g11320 Coffea canephora HOM05D002510 ORTHO05D006928 6.6e-85 318.2 233 66.5
MD01G1108300 Malus domestica HOM05D002510 ORTHO05D006928 6.6e-85 318.2 229 65.1
TAR623G0044 Trochodendron aralioides HOM05D002510 ORTHO05D006928 8.6e-85 317.8 270 58.5
Gorai.011G239300 Gossypium raimondii HOM05D002510 ORTHO05D006928 1.1e-84 317.4 236 65.7
Lalb_Chr02g0142201 Lupinus albus HOM05D002510 ORTHO05D006928 1.5e-84 317.0 278 57.9
EL10Ac3g05855 Beta vulgaris HOM05D002510 ORTHO05D006928 3.3e-84 315.8 228 67.1
DCAR_019102 Daucus carota HOM05D002510 ORTHO05D006928 3.3e-84 315.8 229 65.1
Gohir.D10G213800 Gossypium hirsutum HOM05D002510 ORTHO05D006928 3.3e-84 315.8 222 67.6
CSS0017911 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 4.3e-84 315.5 223 68.2
Atru.chr12.758 Acer truncatum HOM05D002510 ORTHO05D006928 4.7e-83 312.0 233 64.8
Ciclev10032329m.g Citrus clementina HOM05D002510 ORTHO05D006928 4.7e-83 312.0 225 66.2
CAN.G131.8 Capsicum annuum HOM05D002510 ORTHO05D006928 6.2e-83 311.6 228 65.4
Haze_16887 Corylus avellana HOM05D002510 ORTHO05D006928 6.2e-83 311.6 230 64.3
PGR142G1169 Punica granatum HOM05D002510 ORTHO05D006928 6.2e-83 311.6 238 64.7
PGSC0003DMG400033889 Solanum tuberosum HOM05D002510 ORTHO05D006928 6.2e-83 311.6 227 65.6
MD07G1174400 Malus domestica HOM05D002510 ORTHO05D006928 1.1e-82 310.8 231 62.3
Oeu031347.1 Olea europaea HOM05D002510 ORTHO05D006928 1.1e-82 310.8 233 64.4
AT2G39000 Arabidopsis thaliana HOM05D002510 ORTHO05D006928 2.3e-82 309.7 247 59.5
Sabra10G0172300 Salix brachista HOM05D002510 ORTHO05D006928 3.1e-82 309.3 227 65.2
CSS0041581 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 5.2e-82 308.5 277 58.5
Hund12054 Selenicereus undatus HOM05D002510 ORTHO05D006928 5.2e-82 308.5 224 65.2
CSS0006577 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 6.8e-82 308.1 277 58.1
Sp4g21360 Schrenkiella parvula HOM05D002510 ORTHO05D006928 6.8e-82 308.1 227 64.8
CARHR133780 Cardamine hirsuta HOM05D002510 ORTHO05D006928 8.9e-82 307.8 256 59.8
CsaV3_6G036450 Cucumis sativus L. HOM05D002510 ORTHO05D006928 8.9e-82 307.8 242 61.6
MELO3C019798.2 Cucumis melo HOM05D002510 ORTHO05D006928 1.5e-81 307.0 225 64.0
Lalb_Chr06g0162351 Lupinus albus HOM05D002510 ORTHO05D006928 1.5e-81 307.0 225 66.2
THA.LOC104827063 Tarenaya hassleriana HOM05D002510 ORTHO05D006928 2.0e-81 306.6 229 62.9
Ah.10g032650 Amaranthus hybridus HOM05D002510 ORTHO05D006928 3.4e-81 305.8 232 63.8
Actinidia06769 Actinidia chinensis HOM05D002510 ORTHO05D006928 4.4e-81 305.4 269 58.7
AL4G36300 Arabidopsis lyrata HOM05D002510 ORTHO05D006928 4.4e-81 305.4 223 64.6
HanXRQChr14g0456861 Helianthus annuus HOM05D002510 ORTHO05D006928 5.8e-81 305.1 247 61.1
ClCG08G007520 Citrullus lanatus HOM05D002510 ORTHO05D006928 9.8e-81 304.3 225 63.6
Lsat_1_v5_gn_2_112320 Lactuca sativa HOM05D002510 ORTHO05D006928 9.8e-81 304.3 272 57.0
Nitab4.5_0001053g0060 Nicotiana tabacum HOM05D002510 ORTHO05D006928 9.8e-81 304.3 223 65.9
Thhalv10017009m.g Eutrema salsugineum HOM05D002510 ORTHO05D006928 1.7e-80 303.5 225 64.4
Nitab4.5_0002524g0010 Nicotiana tabacum HOM05D002510 ORTHO05D006928 4.9e-80 302.0 223 65.0
Carub.0004s2104 Capsella rubella HOM05D002510 ORTHO05D006928 8.3e-80 301.2 225 63.6
Migut.F01984 Erythranthe guttata HOM05D002510 ORTHO05D006928 1.1e-79 300.8 222 63.5
BcaC02g12914 Brassica carinata HOM05D002510 ORTHO05D006928 1.4e-79 300.4 226 63.7
Os02g0806000 Oryza sativa ssp. japonica HOM05D002510 ORTHO05D006928 4.1e-79 298.9 249 57.0
Sed0007153 Sechium edule HOM05D002510 ORTHO05D006928 5.4e-79 298.5 221 64.3
C04p67010 Brassica napus HOM05D002510 ORTHO05D006928 1.2e-78 297.4 226 63.3
BolC4t28203H Brassica oleracea HOM05D002510 ORTHO05D006928 1.2e-78 297.4 226 63.3
Lj3g0006441 Lotus japonicus HOM05D002510 ORTHO05D006928 3.5e-78 295.8 225 64.0
MSTRG.9172 Avicennia marina HOM05D002510 ORTHO05D006928 4.6e-78 295.4 225 62.7
AUR62037755 Chenopodium quinoa HOM05D002510 ORTHO05D006928 6.0e-78 295.0 222 64.4
Actinidia38854 Actinidia chinensis HOM05D002510 ORTHO05D006928 1.3e-77 293.9 253 59.3
ATR0048G011 Amborella trichopoda HOM05D002510 ORTHO05D006928 6.6e-77 291.6 226 61.5
BraA04t18437Z Brassica rapa HOM05D002510 ORTHO05D006928 1.5e-76 290.4 224 61.6
AUR62018249 Chenopodium quinoa HOM05D002510 ORTHO05D006928 5.6e-76 288.5 222 63.1
Glyma.02G074000 Glycine max HOM05D002510 ORTHO05D006928 2.3e-74 283.1 242 58.3
TPR.G1934 Trifolium pratense HOM05D002510 ORTHO05D006928 2.3e-74 283.1 199 66.8
A04p29730 Brassica napus HOM05D002510 ORTHO05D006928 5.8e-73 278.5 247 56.3
Lalb_Chr03g0035921 Lupinus albus HOM05D002510 ORTHO05D006928 5.8e-73 278.5 242 57.4
vmacro04869 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 1.7e-72 276.9 248 58.1
Rhsim03G0120400 Rhododendron simsii HOM05D002510 ORTHO05D006928 9.2e-71 271.2 225 60.0
SGA_v2.0_scaffold62G21410 Striga asiatica HOM05D002510 ORTHO05D006928 1.2e-70 270.8 208 63.5
Phvul.004G083200 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 7.8e-70 268.1 234 56.8
Migut.F01753 Erythranthe guttata HOM05D002510 ORTHO05D006928 1.7e-69 266.9 224 59.8
VMungo1197G0001 Vigna mungo HOM05D002510 ORTHO05D006928 6.6e-69 265.0 254 53.9
Lj3g0019343 Lotus japonicus HOM05D002510 ORTHO05D006928 1.2e-65 254.2 237 55.3
VMungo0464G1224 Vigna mungo HOM05D002510 ORTHO05D006928 1.7e-64 250.4 238 52.9
arahy.Tifrunner.gnm1.ann1.DB5KD4 Arachis hypogaea HOM05D002510 ORTHO05D006928 1.4e-63 247.3 272 48.9
arahy.Tifrunner.gnm1.ann1.L5PTYD Arachis hypogaea HOM05D002510 ORTHO05D006928 7.1e-63 245.0 272 48.5
SEGI_15474 Sequoiadendron giganteum HOM05D002510 ORTHO05D006928 1.2e-62 244.2 214 55.6
ECA238G3090 Erigeron canadensis HOM05D002510 ORTHO05D006928 2.1e-62 243.4 233 54.9
Dinv36437 Davidia involucrata HOM05D002510 ORTHO05D006928 6.0e-62 241.9 210 59.0
unitig_88.g27817 Utricularia gibba HOM05D002510 ORTHO05D006928 1.5e-60 237.3 225 53.8
SalBow4G2249 Salvia bowleyana HOM05D002510 ORTHO05D006928 2.5e-60 236.5 226 52.2
Gohir.A10G205500 Gossypium hirsutum HOM05D002510 ORTHO05D006928 1.1e-58 231.1 167 65.9
Cpa.g.sc53.85 Carica papaya HOM05D002510 ORTHO05D006928 2.0e-57 226.9 173 65.3
Peaxi162Scf01719g00013 Petunia axillaris HOM05D002510 ORTHO05D006928 7.6e-57 224.9 227 50.7
Gohir.D10G213900 Gossypium hirsutum HOM05D002510 ORTHO05D006928 4.2e-55 219.2 165 64.8
Atru.chr12.782 Acer truncatum HOM05D002510 ORTHO05D006928 1.2e-54 217.6 174 61.5
SalBow3G0053 Salvia bowleyana HOM05D002510 ORTHO05D006928 9.9e-49 198.0 167 58.1
Oeu014386.1 Olea europaea HOM05D002510 ORTHO05D006928 1.2e-46 191.0 168 57.7
Aa31LG5G20680 Aethionema arabicum HOM05D002510 ORTHO05D006928 1.8e-45 187.2 134 64.9
Mapoly0033s0159 Marchantia polymorpha HOM05D002510 ORTHO05D006928 1.5e-44 184.1 248 43.5
CAN.G790.5 Capsicum annuum HOM05D002510 ORTHO05D006928 4.3e-44 182.6 136 61.8
Zm00001eb172140 Zea mays HOM05D002510 ORTHO05D006928 8.1e-43 178.3 133 63.9
vmacro07070 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 2.4e-42 176.8 157 58.0
SMO134G0014 Selaginella moellendorffii HOM05D002510 ORTHO05D006928 1.0e-40 171.4 211 46.0
Sopen04g011630 Solanum pennellii HOM05D002510 ORTHO05D006928 4.6e-38 162.5 138 57.2
Solyc04g025240.2 Solanum lycopersicum HOM05D002510 ORTHO05D006928 1.5e-36 157.5 144 54.2
Glyma.16G155400 Glycine max HOM05D002510 ORTHO05D006928 3.1e-34 149.8 174 50.0
Lj2g0015916 Lotus japonicus HOM05D002510 ORTHO05D006928 3.1e-34 149.8 143 53.8
Solyc04g025230.1 Solanum lycopersicum HOM05D002510 ORTHO05D006928 3.2e-23 113.2 90 61.1
AagrBONN_evm.TU.Sc2ySwM_117.96 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.2e-19 100.5 127 44.9
Haze_18780 Corylus avellana HOM05D000278 ORTHO05D005754 9.1e-18 95.1 131 42.0
Nn3g20716 Nelumbo nucifera HOM05D002510 ORTHO05D006928 2.0e-17 94.0 133 43.6
Ciclev10024578m.g Citrus clementina HOM05D002510 ORTHO05D006928 2.2e-16 90.5 90 47.8
Actinidia32448 Actinidia chinensis HOM05D002510 ORTHO05D006928 3.6e-14 83.2 78 51.3
Cre16.g662650 Chlamydomonas reinhardtii HOM05D002510 ORTHO05D006928 1.1e-12 78.2 246 26.8
PRCOL_00005349 Prasinoderma coloniale HOM05D002510 ORTHO05D006928 7.0e-10 68.9 77 48.1
Pp3c11_5280 Physcomitrium patens HOM05D005733 ORTHO05D007442 1.6e-06 57.8 67 43.3
A03p21800 Brassica napus HOM05D002510 ORTHO05D006928 3.6e-06 56.6 112 34.8
Cre06.g269100 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 8.0e-06 55.5 66 36.4


User provided reference genes

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