Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1434 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 8.8e-72 273.5 134 100.0
Nn3g17142 Nelumbo nucifera HOM05D007272 ORTHO05D009305 6.8e-24 114.4 123 50.4
Dinv33728 Davidia involucrata HOM05D007272 ORTHO05D009305 1.5e-23 113.2 118 51.7
Haze_14576 Corylus avellana HOM05D007272 ORTHO05D009305 2.9e-22 109.0 116 50.0
Oeu037173.1 Olea europaea HOM05D007272 ORTHO05D009305 4.1e-21 105.1 125 47.2
Hma1.2p1_0449F.1_g155160 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 5.4e-21 104.8 128 46.1
Cfa007518 Carpinus fangiana HOM05D007272 ORTHO05D009305 9.2e-21 104.0 113 48.7
TAR629G0691 Trochodendron aralioides HOM05D007272 ORTHO05D009305 9.2e-21 104.0 130 43.8
AagrBONN_evm.TU.Sc2ySwM_344.2727 Anthoceros agrestis HOM05D007272 ORTHO05D009305 1.6e-20 103.2 115 47.8
PSO591G0492 Papaver somniferum HOM05D007272 ORTHO05D009305 2.1e-20 102.8 113 47.8
Ciclev10011541m.g Citrus clementina HOM05D007272 ORTHO05D009305 2.7e-20 102.4 127 48.0
Lj7C400T1 Lonicera japonica HOM05D007272 ORTHO05D009305 4.6e-20 101.7 109 49.5
Manes.17G022200 Manihot esculenta HOM05D007272 ORTHO05D009305 4.6e-20 101.7 122 45.9
TWI34G0655 Tripterygium wilfordii HOM05D007272 ORTHO05D009305 4.6e-20 101.7 122 44.3
Duzib187G0958 Durio zibethinus HOM05D007272 ORTHO05D009305 6.0e-20 101.3 129 44.2
Gohir.A09G022200 Gossypium hirsutum HOM05D007272 ORTHO05D009305 6.0e-20 101.3 132 43.9
GSVIVG01011351001 Vitis vinifera HOM05D007272 ORTHO05D009305 6.0e-20 101.3 119 46.2
RhsimUnG0199700 Rhododendron simsii HOM05D007272 ORTHO05D009305 7.8e-20 100.9 136 42.6
vmacro05725 Vaccinium macrocarpon HOM05D007272 ORTHO05D009305 7.8e-20 100.9 141 41.8
Thecc.04G075900 Theobroma cacao HOM05D007272 ORTHO05D009305 1.0e-19 100.5 128 44.5
Prupe.3G271100 Prunus persica HOM05D007272 ORTHO05D009305 2.3e-19 99.4 119 42.9
QL02p080768 Quercus lobata HOM05D007272 ORTHO05D009305 3.9e-19 98.6 113 46.9
RcHm_v2.0_Chr2g0169041 Rosa chinensis HOM05D007272 ORTHO05D009305 3.9e-19 98.6 139 40.3
PGR142G3376 Punica granatum HOM05D007272 ORTHO05D009305 5.1e-19 98.2 113 46.0
FAN09G2990 Fragaria x ananassa HOM05D007272 ORTHO05D009305 6.6e-19 97.8 125 42.4
Pp3c15_23310 Physcomitrium patens HOM05D007272 ORTHO05D009305 6.6e-19 97.8 119 44.5
FAN14G5197 Fragaria x ananassa HOM05D007272 ORTHO05D009305 8.6e-19 97.4 138 42.8
FvH4_6g49170 Fragaria vesca HOM05D007272 ORTHO05D009305 1.1e-18 97.1 134 41.8
MSTRG.3220 Avicennia marina HOM05D007272 ORTHO05D009305 1.5e-18 96.7 119 42.9
Gorai.006G025400 Gossypium raimondii HOM05D007272 ORTHO05D009305 1.5e-18 96.7 132 42.4
Hund13235 Selenicereus undatus HOM05D007272 ORTHO05D009305 1.5e-18 96.7 118 44.9
CiPaw.04G019400 Carya illinoinensis HOM05D007272 ORTHO05D009305 1.9e-18 96.3 121 40.5
FAN05G2713 Fragaria x ananassa HOM05D007272 ORTHO05D009305 1.9e-18 96.3 129 42.6
Nitab4.5_0000564g0300 Nicotiana tabacum HOM05D007272 ORTHO05D009305 1.9e-18 96.3 126 42.9
QL02p080779 Quercus lobata HOM05D007272 ORTHO05D009305 3.3e-18 95.5 117 42.7
COL.COLO4_25162 Corchorus olitorius HOM05D007118 ORTHO05D008957 4.3e-18 95.1 102 50.0
CANSAT64G0717 Cannabis sativa HOM05D007272 ORTHO05D009305 5.6e-18 94.7 111 41.4
Sc10g0003770 Simmondsia chinensis HOM05D007272 ORTHO05D009305 9.5e-18 94.0 123 43.1
MD17G1048000 Malus domestica HOM05D007272 ORTHO05D009305 1.6e-17 93.2 131 42.0
Actinidia23567 Actinidia chinensis HOM05D007272 ORTHO05D009305 2.1e-17 92.8 118 43.2
ATR0706G038 Amborella trichopoda HOM05D007272 ORTHO05D009305 2.8e-17 92.4 119 42.0
HanXRQChr14g0449311 Helianthus annuus HOM05D007272 ORTHO05D009305 2.8e-17 92.4 131 43.5
Nitab4.5_0009739g0030 Nicotiana tabacum HOM05D007272 ORTHO05D009305 2.8e-17 92.4 128 42.2
FAN02G2692 Fragaria x ananassa HOM05D001960 ORTHO05D004348 3.6e-17 92.0 118 41.5
Lsat_1_v5_gn_2_88701 Lactuca sativa HOM05D007272 ORTHO05D009305 3.6e-17 92.0 135 40.7
Cpa.g.sc14.36 Carica papaya HOM05D007272 ORTHO05D009305 4.7e-17 91.7 100 48.0
Cc07_g03090 Coffea canephora HOM05D007272 ORTHO05D009305 4.7e-17 91.7 118 41.5
AUR62031636 Chenopodium quinoa HOM05D007272 ORTHO05D009305 8.1e-17 90.9 119 44.5
Potri.017G079100 Populus trichocarpa HOM05D007272 ORTHO05D009305 8.1e-17 90.9 122 41.8
Gohir.A05G363800 Gossypium hirsutum HOM05D007272 ORTHO05D009305 1.4e-16 90.1 112 43.8
Lj2g0023599 Lotus japonicus HOM05D007272 ORTHO05D009305 1.4e-16 90.1 134 38.1
DCAR_021668 Daucus carota HOM05D007272 ORTHO05D009305 1.8e-16 89.7 121 39.7
SalBow1G7111 Salvia bowleyana HOM05D007272 ORTHO05D009305 1.8e-16 89.7 115 41.7
SGA_v2.0_scaffold135G34775 Striga asiatica HOM05D007118 ORTHO05D008957 2.3e-16 89.4 125 40.8
Sabra17G0070200 Salix brachista HOM05D007272 ORTHO05D009305 5.2e-16 88.2 114 44.7
Ah.10g031300 Amaranthus hybridus HOM05D007272 ORTHO05D009305 6.8e-16 87.8 121 42.1
Migut.H00895 Erythranthe guttata HOM05D007272 ORTHO05D009305 6.8e-16 87.8 128 40.6
Aqoxy3G03290 Aquilegia oxysepala HOM05D007272 ORTHO05D009305 8.9e-16 87.4 110 43.6
RhsimUnG0056400 Rhododendron simsii HOM05D007272 ORTHO05D009305 8.9e-16 87.4 162 35.8
Lalb_Chr21g0318941 Lupinus albus HOM05D007272 ORTHO05D009305 1.2e-15 87.0 117 40.2
Gohir.D04G050866 Gossypium hirsutum HOM05D007272 ORTHO05D009305 1.5e-15 86.7 112 42.9
Gorai.012G056400 Gossypium raimondii HOM05D007272 ORTHO05D009305 1.5e-15 86.7 112 42.9
Phvul.004G026700 Phaseolus vulgaris HOM05D007272 ORTHO05D009305 2.6e-15 85.9 134 38.8
Sopen02g032460 Solanum pennellii HOM05D007272 ORTHO05D009305 2.6e-15 85.9 127 40.2
EL10Ac2g02942 Beta vulgaris HOM05D007272 ORTHO05D009305 3.4e-15 85.5 93 47.3
Solyc02g087730.3 Solanum lycopersicum HOM05D007272 ORTHO05D009305 3.4e-15 85.5 127 39.4
VMungo0464G0246 Vigna mungo HOM05D007272 ORTHO05D009305 7.6e-15 84.3 117 39.3
Peaxi162Scf00129g00431 Petunia axillaris HOM05D007272 ORTHO05D009305 1.3e-14 83.6 127 40.2
arahy.Tifrunner.gnm1.ann1.091QIK Arachis hypogaea HOM05D007272 ORTHO05D009305 6.4e-14 81.3 82 48.8
ClCG10G014870 Citrullus lanatus HOM05D007272 ORTHO05D009305 6.4e-14 81.3 120 41.7
arahy.Tifrunner.gnm1.ann1.UFNR33 Arachis hypogaea HOM05D007272 ORTHO05D009305 8.4e-14 80.9 95 47.4
SMO356G0594 Selaginella moellendorffii HOM05D007272 ORTHO05D009305 1.1e-13 80.5 117 36.8
Glyma.13G064500 Glycine max HOM05D007272 ORTHO05D009305 1.2e-12 77.0 115 37.4
TPR.G4317 Trifolium pratense HOM05D007272 ORTHO05D009305 7.8e-12 74.3 124 31.5
MD09G1047900 Malus domestica HOM05D007272 ORTHO05D009305 1.7e-11 73.2 182 30.2
Psat1g075440 Pisum sativum HOM05D007272 ORTHO05D009305 5.1e-11 71.6 123 30.1
THA.LOC104822369 Tarenaya hassleriana HOM05D007272 ORTHO05D009305 5.1e-11 71.6 94 40.4
Mapoly0135s0023 Marchantia polymorpha HOM05D007272 ORTHO05D009305 6.6e-11 71.2 107 35.5
Medtr6g011510 Medicago truncatula HOM05D007272 ORTHO05D009305 8.6e-11 70.9 99 36.4
ECA238G2465 Erigeron canadensis HOM05D007272 ORTHO05D009305 1.1e-10 70.5 116 38.8
HPP92_000629 Vanilla planifolia HOM05D007272 ORTHO05D009305 5.6e-10 68.2 122 33.6
Ca_04270_v3 Cicer arietinum L. HOM05D007272 ORTHO05D009305 2.8e-09 65.9 136 31.6
Gohir.D09G021400 Gossypium hirsutum HOM05D007272 ORTHO05D009305 3.6e-09 65.5 87 42.5
CSS0034889 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 8.4e-06 54.3 63 42.9


User provided reference genes

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