Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1414 Ceratophyllum demersum HOM05D002932 ORTHO05D003208 4.9e-92 341.3 192 100.0
CDE10G0893 Ceratophyllum demersum HOM05D002932 ORTHO05D003208 2.5e-72 275.8 196 83.7
Manes.06G154700 Manihot esculenta HOM05D002932 ORTHO05D003208 3.6e-18 95.9 220 32.7
Manes.14G020200 Manihot esculenta HOM05D002932 ORTHO05D003208 3.6e-18 95.9 224 31.7
Gohir.A12G254433 Gossypium hirsutum HOM05D002932 ORTHO05D003208 1.0e-17 94.4 221 33.0
Gohir.D12G255000 Gossypium hirsutum HOM05D002932 ORTHO05D003208 1.8e-17 93.6 224 32.6
Gorai.008G272600 Gossypium raimondii HOM05D002932 ORTHO05D003208 1.8e-17 93.6 224 32.6
TAR629G3108 Trochodendron aralioides HOM05D002932 ORTHO05D003208 1.8e-17 93.6 220 36.4
GSVIVG01028788001 Vitis vinifera HOM05D003816 ORTHO05D004410 1.8e-17 93.6 223 33.2
Cpa.g.sc3.12 Carica papaya HOM05D002932 ORTHO05D003208 3.0e-17 92.8 219 33.3
Duzib084G0326 Durio zibethinus HOM05D002932 ORTHO05D003208 4.0e-17 92.4 221 33.9
Phvul.004G102700 Phaseolus vulgaris HOM05D002932 ORTHO05D003208 5.2e-17 92.0 221 31.2
Thecc.03G188500 Theobroma cacao HOM05D002932 ORTHO05D003208 5.2e-17 92.0 220 32.3
COL.COLO4_30256 Corchorus olitorius HOM05D002932 ORTHO05D003208 6.8e-17 91.7 220 31.4
QL09p012032 Quercus lobata HOM05D002932 ORTHO05D003208 2.0e-16 90.1 228 34.2
VMungo0464G0277 Vigna mungo HOM05D002932 ORTHO05D003208 2.0e-16 90.1 221 31.2
Dinv28362 Davidia involucrata HOM05D002932 ORTHO05D003208 5.7e-16 88.6 221 33.5
Glyma.16G173400 Glycine max HOM05D002932 ORTHO05D003208 5.7e-16 88.6 222 33.3
Duzib205G0983 Durio zibethinus HOM05D002932 ORTHO05D003208 7.5e-16 88.2 220 31.8
Potri.012G035200 Populus trichocarpa HOM05D002932 ORTHO05D003208 1.7e-15 87.0 223 31.4
FvH4_7g30650 Fragaria vesca HOM05D002932 ORTHO05D003208 4.9e-15 85.5 237 30.4
FAN06G0995 Fragaria x ananassa HOM05D002932 ORTHO05D003208 4.9e-15 85.5 237 30.4
FAN10G0880 Fragaria x ananassa HOM05D002932 ORTHO05D003208 4.9e-15 85.5 237 30.4
FAN10G1573 Fragaria x ananassa HOM05D002932 ORTHO05D003208 4.9e-15 85.5 237 30.4
Dinv35290 Davidia involucrata HOM05D002932 ORTHO05D003208 6.3e-15 85.1 221 32.1
Actinidia03151 Actinidia chinensis HOM05D002932 ORTHO05D003208 8.3e-15 84.7 216 31.0
Glyma.09G126400 Glycine max HOM05D002932 ORTHO05D003208 8.3e-15 84.7 226 32.7
TAR374G1073 Trochodendron aralioides HOM05D002932 ORTHO05D003208 8.3e-15 84.7 220 32.3
Glyma.20G164000 Glycine max HOM05D002932 ORTHO05D003208 1.1e-14 84.3 219 32.0
PGR042G1004 Punica granatum HOM05D002932 ORTHO05D003208 1.4e-14 84.0 222 31.5
Sabra12G0024300 Salix brachista HOM05D002932 ORTHO05D003208 1.8e-14 83.6 226 30.1
Sabra15G0019600 Salix brachista HOM05D002932 ORTHO05D003208 1.8e-14 83.6 223 32.3
Duzib068G0647 Durio zibethinus HOM05D002932 ORTHO05D003208 2.4e-14 83.2 220 30.0
FAN01G1179 Fragaria x ananassa HOM05D002932 ORTHO05D003208 2.4e-14 83.2 124 38.7
FAN06G4297 Fragaria x ananassa HOM05D002932 ORTHO05D003208 2.4e-14 83.2 124 38.7
Sabra15G0022400 Salix brachista HOM05D002932 ORTHO05D003208 3.1e-14 82.8 223 31.8
TAR636G0499 Trochodendron aralioides HOM05D002932 ORTHO05D003208 4.1e-14 82.4 220 35.0
VMungo0720G0620 Vigna mungo HOM05D002932 ORTHO05D003208 4.1e-14 82.4 220 29.5
Actinidia08604 Actinidia chinensis HOM05D002932 ORTHO05D003208 5.4e-14 82.0 224 32.1
Rhsim03G0196300 Rhododendron simsii HOM05D002932 ORTHO05D003208 5.4e-14 82.0 219 28.3
Nn7g37319 Nelumbo nucifera HOM05D002932 ORTHO05D003208 9.2e-14 81.3 221 33.9
Sed0008251 Sechium edule HOM05D002932 ORTHO05D003208 1.6e-13 80.5 227 32.6
Atru.chr5.594 Acer truncatum HOM05D002932 ORTHO05D003208 2.0e-13 80.1 228 30.3
FAN03G0587 Fragaria x ananassa HOM05D002932 ORTHO05D003208 2.0e-13 80.1 237 31.2
Potri.015G026600 Populus trichocarpa HOM05D002932 ORTHO05D003208 2.7e-13 79.7 221 29.9
RcHm_v2.0_Chr1g0379591 Rosa chinensis HOM05D002932 ORTHO05D003208 2.7e-13 79.7 124 38.7
Lalb_Chr03g0035141 Lupinus albus HOM05D002932 ORTHO05D003208 3.5e-13 79.3 219 31.5
MBI07_g44813_MAGBIO Magnolia biondii HOM05D002932 ORTHO05D003208 3.5e-13 79.3 221 31.2
ClCG05G008540 Citrullus lanatus HOM05D002932 ORTHO05D003208 5.9e-13 78.6 226 33.2
Lalb_Chr01g0009541 Lupinus albus HOM05D002932 ORTHO05D003208 1.0e-12 77.8 227 33.0
AUR62021078 Chenopodium quinoa HOM05D002932 ORTHO05D003208 1.3e-12 77.4 194 32.5
Phvul.007G077100 Phaseolus vulgaris HOM05D002932 ORTHO05D003208 1.3e-12 77.4 225 30.7
Sed0015119 Sechium edule HOM05D002932 ORTHO05D003208 1.3e-12 77.4 226 34.1
TPR.G36623 Trifolium pratense HOM05D002932 ORTHO05D003208 1.3e-12 77.4 227 33.5
TWI14G1190 Tripterygium wilfordii HOM05D002932 ORTHO05D003208 1.3e-12 77.4 221 32.1
AUR62031454 Chenopodium quinoa HOM05D002932 ORTHO05D003208 1.7e-12 77.0 208 31.7
Nn1g01736 Nelumbo nucifera HOM05D002932 ORTHO05D003208 1.7e-12 77.0 232 32.8
Psat0s694g0080 Pisum sativum HOM05D002932 ORTHO05D003208 1.7e-12 77.0 226 30.1
Rhsim09G0202600 Rhododendron simsii HOM05D002932 ORTHO05D003208 1.7e-12 77.0 203 31.0
MELO3C006960.2 Cucumis melo HOM05D002932 ORTHO05D003208 2.3e-12 76.6 229 31.9
Eucgr.A02685 Eucalyptus grandis HOM05D002932 ORTHO05D003208 2.3e-12 76.6 226 31.4
Glyma.10G229200 Glycine max HOM05D002932 ORTHO05D003208 2.3e-12 76.6 221 30.8
PGR142G0585 Punica granatum HOM05D002932 ORTHO05D003208 2.3e-12 76.6 217 30.4
Haze_00079 Corylus avellana HOM05D002932 ORTHO05D003208 2.9e-12 76.3 232 29.7
CsaV3_3G021720 Cucumis sativus L. HOM05D002932 ORTHO05D003208 2.9e-12 76.3 229 31.9
Cfa016327 Carpinus fangiana HOM05D002932 ORTHO05D003208 3.8e-12 75.9 233 29.6
ECA238G1001 Erigeron canadensis HOM05D002932 ORTHO05D003208 3.8e-12 75.9 208 28.8
Prupe.2G304400 Prunus persica HOM05D002932 ORTHO05D003208 3.8e-12 75.9 128 37.5
Hma1.2p1_0142F.1_g064300 Hydrangea macrophylla HOM05D002932 ORTHO05D003208 5.0e-12 75.5 221 30.8
CSS0021611 Camellia sinensis var. sinensis HOM05D002932 ORTHO05D003208 6.6e-12 75.1 219 30.1
TWI23G0695 Tripterygium wilfordii HOM05D002932 ORTHO05D003208 6.6e-12 75.1 222 30.6
CSS0001843 Camellia sinensis var. sinensis HOM05D002932 ORTHO05D003208 1.5e-11 73.9 118 39.0
CSS0045579 Camellia sinensis var. sinensis HOM05D002932 ORTHO05D003208 1.5e-11 73.9 118 39.0
Psat1g106560 Pisum sativum HOM05D002932 ORTHO05D003208 1.9e-11 73.6 236 30.9
EL10Ac3g05377 Beta vulgaris HOM05D002932 ORTHO05D003208 3.3e-11 72.8 214 30.8
Medtr1g099440 Medicago truncatula HOM05D002932 ORTHO05D003208 3.3e-11 72.8 219 28.8
Eucgr.K00306 Eucalyptus grandis HOM05D002932 ORTHO05D003208 4.3e-11 72.4 223 30.9
Lalb_Chr21g0305311 Lupinus albus HOM05D002932 ORTHO05D003208 4.3e-11 72.4 222 28.4
MD01G1211600 Malus domestica HOM05D002932 ORTHO05D003208 4.3e-11 72.4 123 35.0
MD07G1282200 Malus domestica HOM05D002932 ORTHO05D003208 4.3e-11 72.4 123 35.8
CANSAT21G2430 Cannabis sativa HOM05D002932 ORTHO05D003208 5.6e-11 72.0 243 27.2
Gohir.A11G013400 Gossypium hirsutum HOM05D002932 ORTHO05D003208 5.6e-11 72.0 208 35.1
Lj5g0016966 Lotus japonicus HOM05D002932 ORTHO05D003208 5.6e-11 72.0 124 35.5
TPR.G7742 Trifolium pratense HOM05D002932 ORTHO05D003208 5.6e-11 72.0 226 29.2
vmacro10092 Vaccinium macrocarpon HOM05D002932 ORTHO05D003208 9.5e-11 71.2 116 37.1
arahy.Tifrunner.gnm1.ann1.N7QM32 Arachis hypogaea HOM05D002932 ORTHO05D003208 1.2e-10 70.9 240 30.4
HanXRQChr14g0462641 Helianthus annuus HOM05D002932 ORTHO05D003208 1.2e-10 70.9 203 32.0
arahy.Tifrunner.gnm1.ann1.M5AIDB Arachis hypogaea HOM05D002932 ORTHO05D003208 1.6e-10 70.5 239 30.1
vmacro06597 Vaccinium macrocarpon HOM05D002932 ORTHO05D003208 1.6e-10 70.5 219 27.9
CiPaw.06G005800 Carya illinoinensis HOM05D002932 ORTHO05D003208 2.1e-10 70.1 225 29.8
HanXRQChr13g0392281 Helianthus annuus HOM05D002932 ORTHO05D003208 2.1e-10 70.1 234 28.2
Lj2g0001659 Lotus japonicus HOM05D002932 ORTHO05D003208 4.7e-10 68.9 233 30.5
TPR.G36701 Trifolium pratense HOM05D002932 ORTHO05D003208 4.7e-10 68.9 243 32.5
Sed0018025 Sechium edule HOM05D002932 ORTHO05D003208 8.0e-10 68.2 193 30.1
Psat1g099240 Pisum sativum HOM05D002932 ORTHO05D003208 1.0e-09 67.8 238 30.7
Atru.chr1.321 Acer truncatum HOM05D002932 ORTHO05D003208 3.1e-09 66.2 244 30.7
Medtr6g034055 Medicago truncatula HOM05D002932 ORTHO05D003208 5.2e-09 65.5 223 30.5
ClCG01G000790 Citrullus lanatus HOM05D002932 ORTHO05D003208 6.8e-09 65.1 226 30.1
Medtr6g034060 Medicago truncatula HOM05D002932 ORTHO05D003208 6.8e-09 65.1 100 41.0
HanXRQChr07g0207101 Helianthus annuus HOM05D002932 ORTHO05D003208 1.2e-08 64.3 200 31.0
Sc19g0001040 Simmondsia chinensis HOM05D002932 ORTHO05D003208 1.2e-08 64.3 198 31.3
Ah.13g069610 Amaranthus hybridus HOM05D002932 ORTHO05D003208 1.5e-08 63.9 225 29.3
Dinv32532 Davidia involucrata HOM05D002932 ORTHO05D003208 3.4e-08 62.8 126 30.2
Psat1g099360 Pisum sativum HOM05D002932 ORTHO05D003208 4.4e-08 62.4 239 32.6
Ciclev10023540m.g Citrus clementina HOM05D002932 ORTHO05D003208 1.7e-07 60.5 219 28.3
Psat1g099320 Pisum sativum HOM05D002932 ORTHO05D003208 1.7e-07 60.5 232 31.0
MELO3C005851.2 Cucumis melo HOM05D002932 ORTHO05D003208 2.2e-07 60.1 98 39.8
Aqoxy1G02826 Aquilegia oxysepala HOM05D002932 ORTHO05D003208 2.9e-07 59.7 249 28.5
Lsat_1_v5_gn_8_6240 Lactuca sativa HOM05D002932 ORTHO05D003208 2.9e-07 59.7 118 37.3
Manes.01G251500 Manihot esculenta HOM05D002932 ORTHO05D003208 2.9e-07 59.7 214 26.2
Ah.07g206300 Amaranthus hybridus HOM05D002932 ORTHO05D003208 4.9e-07 58.9 222 29.7
CiPaw.02G036300 Carya illinoinensis HOM05D002932 ORTHO05D003208 4.9e-07 58.9 229 27.5
Dinv43873 Davidia involucrata HOM05D002932 ORTHO05D003208 8.3e-07 58.2 237 24.1
CsaV3_5G000930 Cucumis sativus L. HOM05D002932 ORTHO05D003208 1.1e-06 57.8 98 39.8
PGSC0003DMG400019420 Solanum tuberosum HOM05D002932 ORTHO05D003208 1.1e-06 57.8 198 25.8
Medtr6g034050 Medicago truncatula HOM05D002932 ORTHO05D003208 1.4e-06 57.4 219 28.8
BcaC01g06213 Brassica carinata HOM05D002932 ORTHO05D003208 4.1e-06 55.8 220 26.4
Lalb_Chr02g0141341 Lupinus albus HOM05D002932 ORTHO05D003208 4.1e-06 55.8 221 29.9
Sopen10g005630 Solanum pennellii HOM05D002932 ORTHO05D003208 4.1e-06 55.8 198 25.8
HPP92_023968 Vanilla planifolia HOM05D025792 ORTHO05D030716 4.1e-06 55.8 236 29.7
Sopen03g003700 Solanum pennellii HOM05D002932 ORTHO05D003208 5.4e-06 55.5 123 27.6
PGSC0003DMG400019964 Solanum tuberosum HOM05D002932 ORTHO05D003208 5.4e-06 55.5 101 30.7
Ciclev10005884m.g Citrus clementina HOM05D002932 ORTHO05D003208 7.0e-06 55.1 198 30.3


User provided reference genes

Program Settings