Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1397 Ceratophyllum demersum HOM05D006003 ORTHO05D007388 6.7e-148 527.3 266 100.0
Dinv13362 Davidia involucrata HOM05D006003 ORTHO05D007388 6.4e-90 334.7 260 65.4
CSS0022288 Camellia sinensis var. sinensis HOM05D006003 ORTHO05D007388 1.2e-88 330.5 250 66.8
CSS0003385 Camellia sinensis var. sinensis HOM05D006003 ORTHO05D007388 1.6e-88 330.1 250 66.8
CDE10G0670 Ceratophyllum demersum HOM05D000595 ORTHO05D001274 4.6e-88 328.6 248 69.4
Hma1.2p1_0050F.1_g028770 Hydrangea macrophylla HOM05D006003 ORTHO05D007388 2.3e-87 326.2 258 65.1
MD11G1270000 Malus domestica HOM05D006003 ORTHO05D007388 2.3e-87 326.2 262 62.6
TAR626G1650 Trochodendron aralioides HOM05D006003 ORTHO05D007388 8.6e-87 324.3 259 64.5
Manes.15G098700 Manihot esculenta HOM05D006003 ORTHO05D007388 1.6e-85 320.1 257 64.2
CAN.G375.51 Capsicum annuum HOM05D006003 ORTHO05D007388 4.7e-85 318.5 265 60.0
vmacro11973 Vaccinium macrocarpon HOM05D006003 ORTHO05D007388 1.1e-84 317.4 264 62.1
Actinidia12605 Actinidia chinensis HOM05D006003 ORTHO05D007388 1.8e-84 316.6 250 64.0
Nitab4.5_0003230g0040 Nicotiana tabacum HOM05D006003 ORTHO05D007388 5.2e-84 315.1 265 58.9
Nn6g34421 Nelumbo nucifera HOM05D006003 ORTHO05D007388 1.2e-83 313.9 244 64.8
Thecc.07G133000 Theobroma cacao HOM05D006003 ORTHO05D007388 1.2e-83 313.9 245 63.7
Duzib268G1415 Durio zibethinus HOM05D006003 ORTHO05D007388 1.5e-83 313.5 244 65.2
EL10Ac4g08418 Beta vulgaris HOM05D006003 ORTHO05D007388 2.6e-83 312.8 248 64.1
Solyc07g062150.3 Solanum lycopersicum HOM05D006003 ORTHO05D007388 2.6e-83 312.8 265 60.4
Rhsim06G0211900 Rhododendron simsii HOM05D006003 ORTHO05D007388 3.4e-83 312.4 266 60.5
PGSC0003DMG400007060 Solanum tuberosum HOM05D006003 ORTHO05D007388 4.4e-83 312.0 253 61.7
Ah.04g164020 Amaranthus hybridus HOM05D006003 ORTHO05D007388 5.8e-83 311.6 262 63.0
Nitab4.5_0000347g0030 Nicotiana tabacum HOM05D006003 ORTHO05D007388 5.8e-83 311.6 265 59.2
PGR031G3165 Punica granatum HOM05D006003 ORTHO05D007388 1.3e-82 310.5 246 60.2
Sabra11G0081200 Salix brachista HOM05D006003 ORTHO05D007388 1.3e-82 310.5 251 64.5
Potri.011G104400 Populus trichocarpa HOM05D006003 ORTHO05D007388 3.7e-82 308.9 251 63.7
Prupe.4G156300 Prunus persica HOM05D006003 ORTHO05D007388 6.4e-82 308.1 269 60.2
Atru.chr2.1938 Acer truncatum HOM05D006003 ORTHO05D007388 8.3e-82 307.8 247 64.0
AUR62019651 Chenopodium quinoa HOM05D006003 ORTHO05D007388 8.3e-82 307.8 248 61.7
Eucgr.F03233 Eucalyptus grandis HOM05D006003 ORTHO05D007388 8.3e-82 307.8 259 59.8
TAR624G1186 Trochodendron aralioides HOM05D006003 ORTHO05D007388 8.3e-82 307.8 296 56.8
CANSAT56G1876 Cannabis sativa HOM05D006003 ORTHO05D007388 1.1e-81 307.4 265 58.1
Medtr2g073350 Medicago truncatula HOM05D006003 ORTHO05D007388 1.1e-81 307.4 265 59.2
Sopen07g030420 Solanum pennellii HOM05D006003 ORTHO05D007388 1.1e-81 307.4 268 59.7
Cc05_g10700 Coffea canephora HOM05D006003 ORTHO05D007388 1.4e-81 307.0 250 62.4
DCAR_019616 Daucus carota HOM05D006003 ORTHO05D007388 1.9e-81 306.6 259 59.8
Gohir.A01G047600 Gossypium hirsutum HOM05D006003 ORTHO05D007388 1.9e-81 306.6 250 62.0
HPP92_006378 Vanilla planifolia HOM05D006003 ORTHO05D007388 1.9e-81 306.6 257 61.9
TWI39G0770 Tripterygium wilfordii HOM05D006003 ORTHO05D007388 2.4e-81 306.2 250 62.8
Sed0005123 Sechium edule HOM05D006003 ORTHO05D007388 3.2e-81 305.8 262 59.9
Gorai.002G047000 Gossypium raimondii HOM05D006003 ORTHO05D007388 4.1e-81 305.4 250 61.6
Sabra11G0076500 Salix brachista HOM05D006003 ORTHO05D007388 4.1e-81 305.4 251 63.7
Atru.chr2.1967 Acer truncatum HOM05D006003 ORTHO05D007388 5.4e-81 305.1 247 63.6
Dinv26706 Davidia involucrata HOM05D006003 ORTHO05D007388 7.1e-81 304.7 241 64.3
Lj1C824T4 Lonicera japonica HOM05D006003 ORTHO05D007388 9.2e-81 304.3 223 66.4
Prupe.4G156400 Prunus persica HOM05D006003 ORTHO05D007388 1.2e-80 303.9 265 59.6
FAN16G0946 Fragaria x ananassa HOM05D006003 ORTHO05D007388 1.6e-80 303.5 262 57.6
FvH4_3g17730 Fragaria vesca HOM05D006003 ORTHO05D007388 2.7e-80 302.8 262 57.3
SalBow8G3868 Salvia bowleyana HOM05D006003 ORTHO05D007388 2.7e-80 302.8 262 59.5
Os09g0345700 Oryza sativa ssp. japonica HOM05D006003 ORTHO05D007388 1.7e-79 300.1 253 58.9
MD03G1247500 Malus domestica HOM05D006003 ORTHO05D007388 2.3e-79 299.7 262 58.8
Glyma.13G264900 Glycine max HOM05D006003 ORTHO05D007388 3.0e-79 299.3 261 60.5
Ciclev10021233m.g Citrus clementina HOM05D006003 ORTHO05D007388 3.9e-79 298.9 257 59.1
HanXRQChr14g0439341 Helianthus annuus HOM05D006003 ORTHO05D007388 5.1e-79 298.5 253 59.7
Lj3g0003080 Lotus japonicus HOM05D006003 ORTHO05D007388 5.1e-79 298.5 260 60.4
Migut.M00692 Erythranthe guttata HOM05D006003 ORTHO05D007388 6.6e-79 298.1 251 61.4
Lj3g0000598 Lotus japonicus HOM05D006003 ORTHO05D007388 6.6e-79 298.1 260 60.4
Ca_03928_v3 Cicer arietinum L. HOM05D006003 ORTHO05D007388 8.6e-79 297.7 265 58.5
Ca_30126_v3 Cicer arietinum L. HOM05D006003 ORTHO05D007388 8.6e-79 297.7 265 58.5
GSVIVG01014095001 Vitis vinifera HOM05D006003 ORTHO05D007388 1.1e-78 297.4 260 60.8
Eucgr.F01368 Eucalyptus grandis HOM05D006003 ORTHO05D007388 1.9e-78 296.6 259 59.1
PSO541G5634 Papaver somniferum HOM05D006003 ORTHO05D007388 3.3e-78 295.8 285 54.4
MSTRG.6692 Avicennia marina HOM05D006003 ORTHO05D007388 5.6e-78 295.0 252 59.5
FAN25G0059 Fragaria x ananassa HOM05D006003 ORTHO05D007388 5.6e-78 295.0 277 54.9
ClCG07G010140 Citrullus lanatus HOM05D006003 ORTHO05D007388 2.8e-77 292.7 262 57.3
PSO675G5422 Papaver somniferum HOM05D006003 ORTHO05D007388 2.8e-77 292.7 280 54.3
MELO3C016117.2 Cucumis melo HOM05D006003 ORTHO05D007388 4.7e-77 292.0 262 57.6
CsaV3_4G008190 Cucumis sativus L. HOM05D006003 ORTHO05D007388 4.7e-77 292.0 262 57.6
Glyma.12G234000 Glycine max HOM05D006003 ORTHO05D007388 6.2e-77 291.6 262 58.8
PGR083G1570 Punica granatum HOM05D006003 ORTHO05D007388 1.1e-76 290.8 263 56.3
Lalb_Chr20g0109151 Lupinus albus HOM05D006003 ORTHO05D007388 1.4e-76 290.4 269 56.9
unitig_62.g23076 Utricularia gibba HOM05D006003 ORTHO05D007388 3.1e-76 289.3 275 54.9
Lsat_1_v5_gn_9_100380 Lactuca sativa HOM05D006003 ORTHO05D007388 5.2e-76 288.5 253 59.3
SGA_v2.0_scaffold181G39767 Striga asiatica HOM05D006003 ORTHO05D007388 1.5e-75 287.0 272 55.5
Sc16g0007750 Simmondsia chinensis HOM05D006003 ORTHO05D007388 2.6e-75 286.2 226 61.9
HanXRQChr13g0389731 Helianthus annuus HOM05D006003 ORTHO05D007388 3.4e-75 285.8 253 58.9
Psat5g233200 Pisum sativum HOM05D006003 ORTHO05D007388 3.4e-75 285.8 265 57.0
TPR.G12996 Trifolium pratense HOM05D006003 ORTHO05D007388 9.9e-75 284.3 226 62.4
MD11G1270100 Malus domestica HOM05D006003 ORTHO05D007388 4.9e-74 282.0 264 54.5
Peaxi162Scf00111g01321 Petunia axillaris HOM05D006003 ORTHO05D007388 4.9e-74 282.0 231 60.2
Haze_09249 Corylus avellana HOM05D006003 ORTHO05D007388 6.4e-74 281.6 262 56.1
Lj8A146G66 Lonicera japonica HOM05D006003 ORTHO05D007388 8.4e-74 281.2 241 60.2
Cpa.g.sc77.63 Carica papaya HOM05D006003 ORTHO05D007388 1.9e-73 280.0 263 56.3
Oeu005377.2 Olea europaea HOM05D006003 ORTHO05D007388 5.4e-73 278.5 231 58.0
SHI27565 Sapria himalayana HOM05D006003 ORTHO05D007388 7.1e-73 278.1 229 60.3
CiPaw.11G156000 Carya illinoinensis HOM05D006003 ORTHO05D007388 2.1e-72 276.6 244 58.2
QL08p024148 Quercus lobata HOM05D006003 ORTHO05D007388 3.5e-72 275.8 262 55.7
Gohir.D01G038300 Gossypium hirsutum HOM05D006003 ORTHO05D007388 6.0e-72 275.0 207 65.7
FAN21G1616 Fragaria x ananassa HOM05D006003 ORTHO05D007388 1.0e-71 274.2 262 54.6
ATR0602G094 Amborella trichopoda HOM05D006003 ORTHO05D007388 1.7e-71 273.5 208 66.8
Oeu059254.1 Olea europaea HOM05D006003 ORTHO05D007388 6.6e-71 271.6 231 58.0
Cfa019519 Carpinus fangiana HOM05D006003 ORTHO05D007388 4.3e-70 268.9 232 58.6
ECA240G1635 Erigeron canadensis HOM05D006003 ORTHO05D007388 1.2e-69 267.3 215 61.4
MBI06_g08515_MAGBIO Magnolia biondii HOM05D006003 ORTHO05D007388 1.2e-69 267.3 213 65.3
Thhalv10018897m.g Eutrema salsugineum HOM05D006003 ORTHO05D007388 1.2e-67 260.8 258 52.3
AL2G38990 Arabidopsis lyrata HOM05D006003 ORTHO05D007388 3.4e-67 259.2 258 51.9
THA.LOC104808088 Tarenaya hassleriana HOM05D006003 ORTHO05D007388 3.4e-67 259.2 261 51.7
Sp5g33680 Schrenkiella parvula HOM05D006003 ORTHO05D007388 1.3e-66 257.3 258 51.9
THA.LOC104813991 Tarenaya hassleriana HOM05D006003 ORTHO05D007388 1.3e-66 257.3 263 52.1
BcaC08g47430 Brassica carinata HOM05D006003 ORTHO05D007388 1.7e-66 256.9 258 51.2
arahy.Tifrunner.gnm1.ann1.U60PIC Arachis hypogaea HOM05D006003 ORTHO05D007388 2.2e-66 256.5 265 53.6
BcaC03g15825 Brassica carinata HOM05D006003 ORTHO05D007388 2.9e-66 256.1 258 51.9
C02p35670 Brassica napus HOM05D006003 ORTHO05D007388 2.9e-66 256.1 258 51.9
AT1G78590 Arabidopsis thaliana HOM05D006003 ORTHO05D007388 4.9e-66 255.4 258 51.9
BolC2t09587H Brassica oleracea HOM05D006003 ORTHO05D007388 8.4e-66 254.6 258 51.6
BraA07t31893Z Brassica rapa HOM05D006003 ORTHO05D007388 8.4e-66 254.6 258 51.2
A07p43860 Brassica napus HOM05D006003 ORTHO05D007388 1.1e-65 254.2 258 51.2
C06p52490 Brassica napus HOM05D006003 ORTHO05D007388 1.4e-65 253.8 258 51.2
BolC6t40268H Brassica oleracea HOM05D006003 ORTHO05D007388 1.4e-65 253.8 258 51.2
Aa31LG4G2370 Aethionema arabicum HOM05D006003 ORTHO05D007388 5.4e-65 251.9 263 50.2
CARHR072080 Cardamine hirsuta HOM05D006003 ORTHO05D007388 5.4e-65 251.9 258 50.0
A02p22240 Brassica napus HOM05D006003 ORTHO05D007388 9.3e-65 251.1 258 51.2
Carub.0002s2544 Capsella rubella HOM05D006003 ORTHO05D007388 4.6e-64 248.8 258 50.8
Pp3c14_23600 Physcomitrium patens HOM05D006003 ORTHO05D007388 7.8e-64 248.1 279 50.5
BraA02t07230Z Brassica rapa HOM05D006003 ORTHO05D007388 1.0e-63 247.7 258 50.8
BcaB05g25146 Brassica carinata HOM05D006003 ORTHO05D007388 3.0e-63 246.1 240 53.3
Mapoly0214s0005 Marchantia polymorpha HOM05D006003 ORTHO05D007388 1.5e-62 243.8 256 54.7
SMO169G0094 Selaginella moellendorffii HOM05D006003 ORTHO05D007388 5.6e-62 241.9 214 60.3
CBR_g12698 Chara braunii HOM05D006003 ORTHO05D007388 3.0e-55 219.5 255 46.3
COL.COLO4_17472 Corchorus olitorius HOM05D006003 ORTHO05D007388 4.8e-53 212.2 157 68.2
Sc03g0010720 Simmondsia chinensis HOM05D006003 ORTHO05D007388 4.9e-50 202.2 218 50.9
Phvul.005G076600 Phaseolus vulgaris HOM05D006003 ORTHO05D007388 1.9e-49 200.3 172 61.0
SalBow7G3240 Salvia bowleyana HOM05D006003 ORTHO05D007388 4.6e-48 195.7 174 56.3
FAN11G1972 Fragaria x ananassa HOM05D006003 ORTHO05D007388 9.6e-46 188.0 191 49.7
RcHm_v2.0_Chr5g0029501 Rosa chinensis HOM05D006003 ORTHO05D007388 5.7e-38 162.2 141 53.9
Zm00001eb098430 Zea mays HOM05D006003 ORTHO05D007388 4.8e-37 159.1 134 61.2
AUR62039577 Chenopodium quinoa HOM05D006003 ORTHO05D007388 2.0e-35 153.7 105 63.8
MD03G1248900 Malus domestica HOM05D006003 ORTHO05D007388 5.0e-34 149.1 170 49.4
MCO14G555 Micromonas commoda HOM05D006003 ORTHO05D007388 4.8e-29 132.5 219 40.6
Psat5g275400 Pisum sativum HOM05D006003 ORTHO05D007388 1.0e-23 114.8 117 50.4
CDE03G0511 Ceratophyllum demersum HOM05D006003 ORTHO05D007388 1.7e-21 107.5 138 52.9
RcHm_v2.0_Chr5g0029511 Rosa chinensis HOM05D006003 ORTHO05D007388 7.0e-12 75.5 68 57.4
PRCOL_00004450 Prasinoderma coloniale HOM05D006003 ORTHO05D007388 1.2e-06 58.2 194 30.9


User provided reference genes

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