Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1380 Ceratophyllum demersum HOM05D006504 ORTHO05D007867 5.8e-86 320.9 161 100.0
CDE06G0601 Ceratophyllum demersum HOM05D006504 ORTHO05D007867 6.9e-63 244.2 142 88.0
Nn8g38840 Nelumbo nucifera HOM05D006504 ORTHO05D007867 1.6e-35 153.3 151 55.6
FAN09G0296 Fragaria x ananassa HOM05D006504 ORTHO05D007867 3.4e-30 135.6 160 50.6
Hma1.2p1_0388F.1_g142400 Hydrangea macrophylla HOM05D006504 ORTHO05D007867 3.4e-30 135.6 97 68.0
Cpa.g.sc25.42 Carica papaya HOM05D006504 ORTHO05D007867 7.6e-30 134.4 96 67.7
Aqoxy5G00309 Aquilegia oxysepala HOM05D006504 ORTHO05D007867 2.2e-29 132.9 96 66.7
Eucgr.F03135 Eucalyptus grandis HOM05D006504 ORTHO05D007867 2.2e-29 132.9 97 66.0
FAN02G0681 Fragaria x ananassa HOM05D006504 ORTHO05D007867 2.2e-29 132.9 161 49.7
PSO210G6889 Papaver somniferum HOM05D006504 ORTHO05D007867 2.9e-29 132.5 93 69.9
Duzib235G1492 Durio zibethinus HOM05D006504 ORTHO05D007867 3.8e-29 132.1 168 47.6
Gohir.A05G135200 Gossypium hirsutum HOM05D006504 ORTHO05D007867 3.8e-29 132.1 95 66.3
Gohir.D05G137200 Gossypium hirsutum HOM05D006504 ORTHO05D007867 3.8e-29 132.1 95 66.3
Gorai.009G141600 Gossypium raimondii HOM05D006504 ORTHO05D007867 3.8e-29 132.1 95 66.3
Atru.chr1.3757 Acer truncatum HOM05D006504 ORTHO05D007867 1.1e-28 130.6 96 64.6
PSO210G7829 Papaver somniferum HOM05D006504 ORTHO05D007867 1.1e-28 130.6 93 68.8
Prupe.3G049000 Prunus persica HOM05D006504 ORTHO05D007867 1.1e-28 130.6 96 66.7
TAR383G0025 Trochodendron aralioides HOM05D006504 ORTHO05D007867 1.1e-28 130.6 160 50.0
Glyma.07G009300 Glycine max HOM05D006504 ORTHO05D007867 1.9e-28 129.8 99 64.6
Manes.11G025900 Manihot esculenta HOM05D006504 ORTHO05D007867 1.9e-28 129.8 101 65.3
CiPaw.01G224400 Carya illinoinensis HOM05D006504 ORTHO05D007867 2.5e-28 129.4 95 65.3
Gohir.D10G060350 Gossypium hirsutum HOM05D006504 ORTHO05D007867 2.5e-28 129.4 97 66.0
Manes.04G140200 Manihot esculenta HOM05D006504 ORTHO05D007867 3.2e-28 129.0 97 64.9
Lj5A44T119 Lonicera japonica HOM05D006504 ORTHO05D007867 4.2e-28 128.6 121 55.4
CsaV3_3G043850 Cucumis sativus L. HOM05D006504 ORTHO05D007867 7.2e-28 127.9 106 60.4
Nn8g38837 Nelumbo nucifera HOM05D006504 ORTHO05D007867 7.2e-28 127.9 133 54.9
RcHm_v2.0_Chr2g0143361 Rosa chinensis HOM05D006504 ORTHO05D007867 7.2e-28 127.9 97 63.9
Cc05_g02540 Coffea canephora HOM05D006504 ORTHO05D007867 9.3e-28 127.5 162 46.3
Glyma.08G192500 Glycine max HOM05D006504 ORTHO05D007867 9.3e-28 127.5 172 48.3
Potri.003G037200 Populus trichocarpa HOM05D006504 ORTHO05D007867 9.3e-28 127.5 96 63.5
Gorai.011G064600 Gossypium raimondii HOM05D006504 ORTHO05D007867 1.2e-27 127.1 97 64.9
TWI31G0577 Tripterygium wilfordii HOM05D006504 ORTHO05D007867 1.2e-27 127.1 182 45.1
FvH4_6g33500 Fragaria vesca HOM05D006504 ORTHO05D007867 2.1e-27 126.3 96 64.6
FAN14G5793 Fragaria x ananassa HOM05D006504 ORTHO05D007867 2.1e-27 126.3 96 64.6
arahy.Tifrunner.gnm1.ann1.S1QT98 Arachis hypogaea HOM05D006504 ORTHO05D007867 4.6e-27 125.2 99 62.6
ECA234G1551 Erigeron canadensis HOM05D000001 ORTHO05D009948 4.6e-27 125.2 105 60.0
Lalb_Chr25g0280741 Lupinus albus HOM05D006504 ORTHO05D007867 6.1e-27 124.8 99 62.6
GSVIVG01016863001 Vitis vinifera HOM05D006504 ORTHO05D007867 6.1e-27 124.8 167 46.1
THA.LOC104822636 Tarenaya hassleriana HOM05D006504 ORTHO05D007867 7.9e-27 124.4 97 60.8
QL05p000665 Quercus lobata HOM05D006504 ORTHO05D007867 1.0e-26 124.0 95 65.3
MSTRG.22579 Avicennia marina HOM05D006504 ORTHO05D007867 1.3e-26 123.6 170 46.5
QL05p000757 Quercus lobata HOM05D006504 ORTHO05D007867 2.3e-26 122.9 95 64.2
HPP92_023888 Vanilla planifolia HOM05D006504 ORTHO05D007867 2.3e-26 122.9 159 47.2
Thecc.06G112500 Theobroma cacao HOM05D006504 ORTHO05D007867 3.9e-26 122.1 161 46.6
CAN.G675.25 Capsicum annuum HOM05D006504 ORTHO05D007867 6.7e-26 121.3 97 60.8
Ciclev10026403m.g Citrus clementina HOM05D006504 ORTHO05D007867 6.7e-26 121.3 167 44.3
Medtr8g017180 Medicago truncatula HOM05D006504 ORTHO05D007867 8.8e-26 120.9 97 60.8
FAN21G2275 Fragaria x ananassa HOM05D006504 ORTHO05D007867 1.1e-25 120.6 93 64.5
Os01g0501000 Oryza sativa ssp. japonica HOM05D006504 ORTHO05D007867 1.1e-25 120.6 99 59.6
Sp1g40740 Schrenkiella parvula HOM05D006504 ORTHO05D007867 1.5e-25 120.2 95 58.9
Lsat_1_v5_gn_5_135100 Lactuca sativa HOM05D006504 ORTHO05D007867 3.3e-25 119.0 194 40.2
Psat4g188440 Pisum sativum HOM05D006504 ORTHO05D007867 3.3e-25 119.0 99 58.6
VMungo0331G1418 Vigna mungo HOM05D006504 ORTHO05D007867 4.3e-25 118.6 185 41.6
arahy.Tifrunner.gnm1.ann1.2CYW67 Arachis hypogaea HOM05D006504 ORTHO05D007867 7.4e-25 117.9 214 37.4
Carub.0001s4357 Capsella rubella HOM05D006504 ORTHO05D007867 7.4e-25 117.9 95 56.8
Solyc02g069520.2 Solanum lycopersicum HOM05D006504 ORTHO05D007867 1.3e-24 117.1 97 56.7
Sopen02g018660 Solanum pennellii HOM05D006504 ORTHO05D007867 1.3e-24 117.1 97 56.7
COL.COLO4_30670 Corchorus olitorius HOM05D006504 ORTHO05D007867 2.8e-24 115.9 86 65.1
Nn5g26799 Nelumbo nucifera HOM05D006504 ORTHO05D007867 2.8e-24 115.9 135 50.4
CSS0018438 Camellia sinensis var. sinensis HOM05D006504 ORTHO05D007867 3.7e-24 115.5 188 42.0
AT1G55080 Arabidopsis thaliana HOM05D006504 ORTHO05D007867 4.8e-24 115.2 144 45.8
Lj3g0009120 Lotus japonicus HOM05D006504 ORTHO05D007867 4.8e-24 115.2 191 40.8
ATR0661G108 Amborella trichopoda HOM05D006504 ORTHO05D007867 1.1e-23 114.0 161 42.2
Peaxi162Scf00195g00313 Petunia axillaris HOM05D006504 ORTHO05D007867 1.1e-23 114.0 94 58.5
TPR.G37598 Trifolium pratense HOM05D006504 ORTHO05D007867 1.1e-23 114.0 190 41.1
HanXRQChr12g0360501 Helianthus annuus HOM05D006504 ORTHO05D007867 1.4e-23 113.6 177 42.4
AL1G63070 Arabidopsis lyrata HOM05D006504 ORTHO05D007867 5.3e-23 111.7 143 45.5
arahy.Tifrunner.gnm1.ann1.Y1EG1J Arachis hypogaea HOM05D006504 ORTHO05D007867 6.9e-23 111.3 88 63.6
BolC3t21536H Brassica oleracea HOM05D006504 ORTHO05D007867 9.1e-23 110.9 94 56.4
BraA08t32155Z Brassica rapa HOM05D006504 ORTHO05D007867 1.2e-22 110.5 94 56.4
BcaB04g17003 Brassica carinata HOM05D006504 ORTHO05D007867 2.0e-22 109.8 94 56.4
BcaC01g01455 Brassica carinata HOM05D006504 ORTHO05D007867 2.0e-22 109.8 94 55.3
MD09G1192700 Malus domestica HOM05D006504 ORTHO05D007867 2.0e-22 109.8 79 68.4
Migut.I01030 Erythranthe guttata HOM05D006504 ORTHO05D007867 7.7e-22 107.8 159 45.3
CARHR044670 Cardamine hirsuta HOM05D006504 ORTHO05D007867 1.0e-21 107.5 125 47.2
PGR102G0591 Punica granatum HOM05D006504 ORTHO05D007867 1.0e-21 107.5 184 42.4
Cfa003580 Carpinus fangiana HOM05D006504 ORTHO05D007867 1.3e-21 107.1 85 62.4
MELO3C030574.2 Cucumis melo HOM05D006504 ORTHO05D007867 1.3e-21 107.1 90 62.2
Sc12g0010270 Simmondsia chinensis HOM05D006504 ORTHO05D007867 1.3e-21 107.1 84 60.7
Ah.08g216230 Amaranthus hybridus HOM05D006504 ORTHO05D007867 1.7e-21 106.7 88 55.7
HPP92_023833 Vanilla planifolia HOM05D006504 ORTHO05D007867 1.7e-21 106.7 91 52.7
PGSC0003DMG400021202 Solanum tuberosum HOM05D006504 ORTHO05D007867 1.9e-20 103.2 87 56.3
arahy.Tifrunner.gnm1.ann1.IBA4C6 Arachis hypogaea HOM05D006504 ORTHO05D007867 4.2e-20 102.1 85 60.0
ATR0800G060 Amborella trichopoda HOM05D006504 ORTHO05D007867 6.1e-19 98.2 111 47.7
Aa31LG10G870 Aethionema arabicum HOM05D006504 ORTHO05D007867 7.9e-19 97.8 122 43.4
Mapoly0004s0244 Marchantia polymorpha HOM05D006504 ORTHO05D007867 2.3e-18 96.3 109 47.7
A07p10460 Brassica napus HOM05D006504 ORTHO05D007867 5.1e-18 95.1 92 45.7
BraA07t28846Z Brassica rapa HOM05D006504 ORTHO05D007867 5.1e-18 95.1 92 45.7
BcaC06g35444 Brassica carinata HOM05D006504 ORTHO05D007867 1.5e-17 93.6 92 45.7
C07p16100 Brassica napus HOM05D006504 ORTHO05D007867 1.5e-17 93.6 92 45.7
BolC7t42095H Brassica oleracea HOM05D006504 ORTHO05D007867 1.5e-17 93.6 92 45.7
BcaB03g13872 Brassica carinata HOM05D006504 ORTHO05D007867 2.0e-17 93.2 92 48.9
A08p01030 Brassica napus HOM05D001264 ORTHO05D007867 2.0e-17 93.2 79 58.2
C03p92210 Brassica napus HOM05D001264 ORTHO05D007867 2.0e-17 93.2 79 58.2
BolC6t36770H Brassica oleracea HOM05D006504 ORTHO05D007867 2.6e-17 92.8 94 52.1
BraA05t20659Z Brassica rapa HOM05D006504 ORTHO05D007867 9.7e-17 90.9 143 42.7
Rhsim12G0206400 Rhododendron simsii HOM05D006504 ORTHO05D007867 4.8e-16 88.6 104 50.0
SEGI_28258 Sequoiadendron giganteum HOM05D006504 ORTHO05D007867 6.3e-16 88.2 112 46.4
Carub.0001s2784 Capsella rubella HOM05D006504 ORTHO05D007867 1.2e-14 84.0 112 39.3
QL05p000679 Quercus lobata HOM05D006504 ORTHO05D007867 1.2e-14 84.0 85 56.5
QL05p000687 Quercus lobata HOM05D006504 ORTHO05D007867 1.2e-14 84.0 85 56.5
Zm00001eb066180 Zea mays HOM05D006504 ORTHO05D007867 1.2e-14 84.0 97 45.4
SMO358G0601 Selaginella moellendorffii HOM05D006504 ORTHO05D007867 1.7e-13 80.1 114 44.7
ClCG07G013760 Citrullus lanatus HOM05D006504 ORTHO05D007867 2.9e-13 79.3 81 54.3
A05p17670 Brassica napus HOM05D006504 ORTHO05D007867 8.5e-13 77.8 128 43.0
C06p15780 Brassica napus HOM05D001264 ORTHO05D001167 2.5e-12 76.3 79 53.2
Gohir.A10G058600 Gossypium hirsutum HOM05D006504 ORTHO05D007867 4.2e-12 75.5 145 37.9
BcaC08g44177 Brassica carinata HOM05D001264 ORTHO05D001167 1.6e-11 73.6 79 51.9
Sp3g12060 Schrenkiella parvula HOM05D006504 ORTHO05D007867 4.7e-11 72.0 87 47.1
vmacro17023 Vaccinium macrocarpon HOM05D006504 ORTHO05D007867 2.0e-09 66.6 50 58.0
AL1G43430 Arabidopsis lyrata HOM05D006504 ORTHO05D007867 5.7e-09 65.1 102 40.2
SGA_v2.0_scaffold127G34055 Striga asiatica HOM05D006504 ORTHO05D007867 5.7e-09 65.1 154 37.0
TPR.G19289 Trifolium pratense HOM05D006504 ORTHO05D007867 9.7e-09 64.3 182 31.3
Thhalv10022201m.g Eutrema salsugineum HOM05D006504 ORTHO05D007867 1.3e-08 63.9 68 50.0
Haze_15959 Corylus avellana HOM05D006504 ORTHO05D007867 2.8e-08 62.8 48 60.4
DCAR_007625 Daucus carota HOM05D006504 ORTHO05D007867 2.8e-08 62.8 85 42.4
Nitab4.5_0001219g0120 Nicotiana tabacum HOM05D006504 ORTHO05D007867 4.8e-08 62.0 88 42.0
Pp3c21_4920 Physcomitrium patens HOM05D006504 ORTHO05D007867 6.3e-08 61.6 105 34.3
SGA_v2.0_scaffold464G52010 Striga asiatica HOM05D006504 ORTHO05D007867 4.5e-06 55.5 43 62.8
AT1G29580 Arabidopsis thaliana HOM05D006504 ORTHO05D007867 7.7e-06 54.7 113 35.4


User provided reference genes

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