Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1371 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 1.9e-170 602.4 302 100.0
Nn3g16880 Nelumbo nucifera HOM05D004671 ORTHO05D005638 1.1e-53 214.5 163 62.6
TAR629G1771 Trochodendron aralioides HOM05D004671 ORTHO05D005638 2.1e-52 210.3 155 63.2
GSVIVG01028933001 Vitis vinifera HOM05D004671 ORTHO05D005638 4.3e-50 202.6 161 61.5
PSO017G5643 Papaver somniferum HOM05D004671 ORTHO05D005638 7.6e-47 191.8 171 57.9
PSO063G7539 Papaver somniferum HOM05D004671 ORTHO05D005638 3.8e-46 189.5 171 57.3
Actinidia03123 Actinidia chinensis HOM05D004671 ORTHO05D005638 3.0e-43 179.9 184 49.5
Duzib205G1877 Durio zibethinus HOM05D004671 ORTHO05D005638 3.9e-43 179.5 161 52.8
Thecc.03G178300 Theobroma cacao HOM05D004671 ORTHO05D005638 5.1e-43 179.1 161 52.2
Atru.chr1.442 Acer truncatum HOM05D004671 ORTHO05D005638 2.5e-42 176.8 164 51.8
Eucgr.K00269 Eucalyptus grandis HOM05D004671 ORTHO05D005638 4.3e-42 176.0 166 51.8
Manes.14G025200 Manihot esculenta HOM05D004671 ORTHO05D005638 4.3e-42 176.0 168 50.6
Gohir.D09G042500 Gossypium hirsutum HOM05D004671 ORTHO05D005638 5.6e-42 175.6 167 53.3
Gorai.006G048800 Gossypium raimondii HOM05D004671 ORTHO05D005638 5.6e-42 175.6 167 53.3
Mapoly0133s0004 Marchantia polymorpha HOM05D004671 ORTHO05D005638 5.6e-42 175.6 181 48.1
TWI14G0685 Tripterygium wilfordii HOM05D004671 ORTHO05D005638 5.6e-42 175.6 168 53.0
Gohir.A09G041700 Gossypium hirsutum HOM05D004671 ORTHO05D005638 9.6e-42 174.9 167 52.7
GSVIVG01017918001 Vitis vinifera HOM05D004671 ORTHO05D005638 9.6e-42 174.9 168 50.6
Aqoxy3G03421 Aquilegia oxysepala HOM05D004671 ORTHO05D005638 3.6e-41 172.9 167 51.5
CAN.G208.79 Capsicum annuum HOM05D004671 ORTHO05D005638 3.6e-41 172.9 170 50.6
Sed0007536 Sechium edule HOM05D004671 ORTHO05D005638 8.1e-41 171.8 172 54.1
Ciclev10004721m.g Citrus clementina HOM05D004671 ORTHO05D005638 1.1e-40 171.4 166 50.6
Dinv24388 Davidia involucrata HOM05D004671 ORTHO05D005638 2.4e-40 170.2 184 48.4
COL.COLO4_14329 Corchorus olitorius HOM05D004671 ORTHO05D005638 3.1e-40 169.9 163 54.6
PGR142G1152 Punica granatum HOM05D004671 ORTHO05D005638 3.1e-40 169.9 156 53.8
CANSAT21G1295 Cannabis sativa HOM05D004671 ORTHO05D005638 6.9e-40 168.7 168 51.2
CANSAT21G1725 Cannabis sativa HOM05D004671 ORTHO05D005638 6.9e-40 168.7 168 51.2
Sc13g0008790 Simmondsia chinensis HOM05D004671 ORTHO05D005638 6.9e-40 168.7 186 47.8
ClCG05G008100 Citrullus lanatus HOM05D004671 ORTHO05D005638 9.0e-40 168.3 187 49.2
CsaV3_3G017180 Cucumis sativus L. HOM05D004671 ORTHO05D005638 1.5e-39 167.5 174 50.6
Nitab4.5_0000080g0100 Nicotiana tabacum HOM05D004671 ORTHO05D005638 2.6e-39 166.8 170 48.8
Cpa.g.sc107.62 Carica papaya HOM05D004671 ORTHO05D005638 7.6e-39 165.2 190 45.8
Nitab4.5_0001951g0070 Nicotiana tabacum HOM05D004671 ORTHO05D005638 7.6e-39 165.2 170 48.8
vmacro09835 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 2.2e-38 163.7 198 41.4
Rhsim09G0198100 Rhododendron simsii HOM05D004671 ORTHO05D005638 4.9e-38 162.5 167 49.1
MSTRG.27109 Avicennia marina HOM05D004671 ORTHO05D005638 6.4e-38 162.2 169 49.1
Cc02_g02840 Coffea canephora HOM05D004671 ORTHO05D005638 1.1e-37 161.4 172 47.1
Sc13g0008680 Simmondsia chinensis HOM05D004671 ORTHO05D005638 2.4e-37 160.2 182 47.8
Potri.015G144900 Populus trichocarpa HOM05D004671 ORTHO05D005638 3.2e-37 159.8 174 47.7
Sc13g0008760 Simmondsia chinensis HOM05D004671 ORTHO05D005638 3.2e-37 159.8 182 48.4
ECA233G0868 Erigeron canadensis HOM05D004671 ORTHO05D005638 5.4e-37 159.1 165 47.3
HanXRQChr15g0497081 Helianthus annuus HOM05D004671 ORTHO05D005638 7.1e-37 158.7 168 48.2
Lsat_1_v5_gn_3_14041 Lactuca sativa HOM05D004671 ORTHO05D005638 9.3e-37 158.3 170 46.5
HanXRQChr10g0304161 Helianthus annuus HOM05D004671 ORTHO05D005638 1.6e-36 157.5 168 47.6
Sabra15G0154400 Salix brachista HOM05D004671 ORTHO05D005638 2.1e-36 157.1 175 45.7
CiPaw.03G107600 Carya illinoinensis HOM05D004671 ORTHO05D005638 3.5e-36 156.4 174 48.3
Pp3c16_7220 Physcomitrium patens HOM05D004671 ORTHO05D005638 3.5e-36 156.4 163 46.0
Lsat_1_v5_gn_8_8441 Lactuca sativa HOM05D004671 ORTHO05D005638 4.6e-36 156.0 163 47.9
HanXRQChr06g0163751 Helianthus annuus HOM05D004671 ORTHO05D005638 6.0e-36 155.6 168 47.0
CSS0016908 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 7.9e-36 155.2 123 61.0
AUR62015967 Chenopodium quinoa HOM05D004671 ORTHO05D005638 1.0e-35 154.8 158 48.7
Ca_10754_v3 Cicer arietinum L. HOM05D004671 ORTHO05D005638 2.3e-35 153.7 166 51.2
DCAR_015049 Daucus carota HOM05D004671 ORTHO05D005638 2.3e-35 153.7 169 46.7
Hund04757 Selenicereus undatus HOM05D004671 ORTHO05D005638 3.0e-35 153.3 162 51.9
vmacro21316 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 3.0e-35 153.3 111 59.5
AagrBONN_evm.TU.Sc2ySwM_344.423 Anthoceros agrestis HOM05D004671 ORTHO05D005638 3.9e-35 152.9 179 46.4
Prupe.2G295500 Prunus persica HOM05D004671 ORTHO05D005638 3.9e-35 152.9 198 44.4
Cfa002753 Carpinus fangiana HOM05D004671 ORTHO05D005638 5.1e-35 152.5 176 46.6
HPP92_020192 Vanilla planifolia HOM05D004671 ORTHO05D005638 8.7e-35 151.8 144 55.6
ATR0737G144 Amborella trichopoda HOM05D004671 ORTHO05D005638 1.1e-34 151.4 158 50.0
SMO276G0042 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 1.9e-34 150.6 163 49.7
DCAR_010301 Daucus carota HOM05D004671 ORTHO05D005638 3.3e-34 149.8 169 46.2
Cfa022980 Carpinus fangiana HOM05D004671 ORTHO05D005638 9.6e-34 148.3 170 46.5
SGA_v2.0_scaffold60G21057 Striga asiatica HOM05D004671 ORTHO05D005638 9.6e-34 148.3 172 42.4
Ah.13g068640 Amaranthus hybridus HOM05D004671 ORTHO05D005638 2.1e-33 147.1 160 46.2
THA.LOC104818634 Tarenaya hassleriana HOM05D004671 ORTHO05D005638 2.8e-33 146.7 171 45.6
AL5G28510 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 3.6e-33 146.4 170 47.1
RcHm_v2.0_Chr1g0377571 Rosa chinensis HOM05D004671 ORTHO05D005638 6.2e-33 145.6 167 45.5
AT3G49000 Arabidopsis thaliana HOM05D004671 ORTHO05D005638 8.1e-33 145.2 170 46.5
RcHm_v2.0_Chr6g0258831 Rosa chinensis HOM05D004671 ORTHO05D005638 8.1e-33 145.2 176 43.8
Os01g0679000 Oryza sativa ssp. japonica HOM05D004671 ORTHO05D005638 1.1e-32 144.8 169 49.7
MD07G1271200 Malus domestica HOM05D004671 ORTHO05D005638 1.8e-32 144.1 196 43.4
SalBow1G5895 Salvia bowleyana HOM05D004671 ORTHO05D005638 2.4e-32 143.7 169 44.4
AL6G42740 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 4.0e-32 142.9 170 45.9
Psat6g198360 Pisum sativum HOM05D004671 ORTHO05D005638 4.0e-32 142.9 164 48.2
Lj5g0019412 Lotus japonicus HOM05D004671 ORTHO05D005638 5.3e-32 142.5 170 46.5
Lalb_Chr06g0161161 Lupinus albus HOM05D004671 ORTHO05D005638 5.3e-32 142.5 166 47.0
Phvul.007G071300 Phaseolus vulgaris HOM05D004671 ORTHO05D005638 5.3e-32 142.5 169 45.0
Thhalv10003189m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 6.9e-32 142.1 169 46.7
Zm00001eb160040 Zea mays HOM05D004671 ORTHO05D005638 6.9e-32 142.1 169 49.1
Thhalv10010290m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 1.2e-31 141.4 171 46.8
FAN06G3892 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.2e-31 141.4 173 45.1
SalBow1G2445 Salvia bowleyana HOM05D004671 ORTHO05D005638 2.0e-31 140.6 169 43.8
FvH4_7g29570 Fragaria vesca HOM05D004671 ORTHO05D005638 3.4e-31 139.8 165 46.7
FAN06G5094 Fragaria x ananassa HOM05D004671 ORTHO05D005638 3.4e-31 139.8 165 46.7
VMungo0720G2100 Vigna mungo HOM05D004671 ORTHO05D005638 3.4e-31 139.8 167 44.3
EL10Ac3g05622 Beta vulgaris HOM05D004671 ORTHO05D005638 9.9e-31 138.3 162 46.3
CARHR157820 Cardamine hirsuta HOM05D004671 ORTHO05D005638 1.3e-30 137.9 171 46.8
Migut.K00770 Erythranthe guttata HOM05D004671 ORTHO05D005638 1.7e-30 137.5 163 42.9
Carub.0005s1517 Capsella rubella HOM05D004671 ORTHO05D005638 2.2e-30 137.1 170 44.7
Glyma.10G234800 Glycine max HOM05D004671 ORTHO05D005638 2.2e-30 137.1 169 43.8
Glyma.20G159500 Glycine max HOM05D004671 ORTHO05D005638 2.2e-30 137.1 171 43.9
FAN03G0738 Fragaria x ananassa HOM05D004671 ORTHO05D005638 4.9e-30 136.0 169 45.0
Medtr1g101100 Medicago truncatula HOM05D004671 ORTHO05D005638 4.9e-30 136.0 164 45.7
FAN01G2609 Fragaria x ananassa HOM05D004671 ORTHO05D005638 6.4e-30 135.6 169 45.0
FAN10G3685 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.1e-29 134.8 169 45.0
FAN10G4176 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.1e-29 134.8 169 45.0
MD01G1202100 Malus domestica HOM05D004671 ORTHO05D005638 1.1e-29 134.8 168 45.2
Sp5g13050 Schrenkiella parvula HOM05D004671 ORTHO05D005638 3.2e-29 133.3 167 44.3
Haze_25041 Corylus avellana HOM05D004671 ORTHO05D005638 4.2e-29 132.9 201 39.8
Zm00001eb440850 Zea mays HOM05D004671 ORTHO05D005638 7.1e-29 132.1 175 45.1
BcaC01g02382 Brassica carinata HOM05D004671 ORTHO05D005638 9.3e-29 131.7 173 46.2
C03p65870 Brassica napus HOM05D004671 ORTHO05D005638 9.3e-29 131.7 173 46.2
BolC3t18845H Brassica oleracea HOM05D004671 ORTHO05D005638 9.3e-29 131.7 173 46.2
TPR.G27007 Trifolium pratense HOM05D004671 ORTHO05D005638 2.7e-28 130.2 159 45.3
arahy.Tifrunner.gnm1.ann1.V0I5I8 Arachis hypogaea HOM05D004671 ORTHO05D005638 6.0e-28 129.0 168 39.3
Aa31LG4G17500 Aethionema arabicum HOM05D004671 ORTHO05D005638 1.3e-27 127.9 169 42.0
BcaB02g09572 Brassica carinata HOM05D004671 ORTHO05D005638 2.3e-27 127.1 171 45.6
BraA06t25741Z Brassica rapa HOM05D004671 ORTHO05D005638 5.1e-27 125.9 173 44.5
CBR_g5700 Chara braunii HOM05D004671 ORTHO05D005638 5.1e-27 125.9 162 39.5
A06p28000 Brassica napus HOM05D004671 ORTHO05D005638 6.7e-27 125.6 173 44.5
SHI26612 Sapria himalayana HOM05D004671 ORTHO05D005638 7.4e-26 122.1 167 40.7
Carub.0004s0531 Capsella rubella HOM05D004671 ORTHO05D005638 2.8e-25 120.2 164 43.3
Glyma.20G157700 Glycine max HOM05D004671 ORTHO05D005638 3.1e-24 116.7 120 47.5
AUR62021173 Chenopodium quinoa HOM05D004671 ORTHO05D005638 1.2e-23 114.8 158 38.6
arahy.Tifrunner.gnm1.ann1.U8RPI8 Arachis hypogaea HOM05D004671 ORTHO05D005638 1.5e-23 114.4 239 30.5
Glyma.12G162990 Glycine max HOM05D004671 ORTHO05D005638 1.0e-22 111.7 118 47.5
SMO143G0293 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 1.9e-21 107.5 147 43.5
MELO3C031814.2 Cucumis melo HOM05D004671 ORTHO05D005638 6.0e-20 102.4 170 40.6
CAN.G527.1 Capsicum annuum HOM05D004671 ORTHO05D005638 3.0e-19 100.1 219 31.1
Haze_13677 Corylus avellana HOM05D004671 ORTHO05D005638 7.4e-18 95.5 241 29.5
Oeu002719.1 Olea europaea HOM05D004671 ORTHO05D005638 8.2e-17 92.0 111 47.7
Cre11.g476376 Chlamydomonas reinhardtii HOM05D030013 ORTHO05D028799 8.4e-14 82.0 174 30.5
Cre16.g673900 Chlamydomonas reinhardtii HOM05D004671 ORTHO05D005638 1.9e-13 80.9 172 30.8
Peaxi162Scf00848g00015 Petunia axillaris HOM05D004671 ORTHO05D005638 1.9e-13 80.9 67 52.2
Sed0027520 Sechium edule HOM05D004671 ORTHO05D005638 8.7e-11 72.0 83 44.6
unitig_37.g12531 Utricularia gibba HOM05D004671 ORTHO05D005638 1.9e-10 70.9 166 34.9


User provided reference genes

Program Settings