Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1331 Ceratophyllum demersum HOM05D000063 ORTHO05D031276 7.0e-71 270.4 127 100.0
CDE06G2068 Ceratophyllum demersum HOM05D000063 ORTHO05D006552 1.8e-21 106.3 55 98.2
TAR628G1337 Trochodendron aralioides HOM05D000063 ORTHO05D006552 6.7e-13 77.8 55 69.1
MBI16_g34335_MAGBIO Magnolia biondii HOM05D000063 ORTHO05D006552 1.1e-12 77.0 55 72.7
Aqoxy6G01097 Aquilegia oxysepala HOM05D000063 ORTHO05D006552 7.4e-12 74.3 55 61.8
Duzib187G1709 Durio zibethinus HOM05D000063 ORTHO05D006552 9.7e-12 73.9 55 65.5
Duzib264G0653 Durio zibethinus HOM05D000063 ORTHO05D006552 4.8e-11 71.6 55 60.0
COL.COLO4_22087 Corchorus olitorius HOM05D000063 ORTHO05D006552 6.3e-11 71.2 55 60.0
Thecc.01G036700 Theobroma cacao HOM05D000063 ORTHO05D006552 6.3e-11 71.2 55 61.8
PSO675G3854 Papaver somniferum HOM05D000063 ORTHO05D006552 1.1e-10 70.5 55 60.0
Nn1g05012 Nelumbo nucifera HOM05D000063 ORTHO05D006552 1.4e-10 70.1 58 63.8
PSO541G0891 Papaver somniferum HOM05D000063 ORTHO05D006552 1.4e-10 70.1 55 60.0
QL06p045917 Quercus lobata HOM05D000063 ORTHO05D006552 3.1e-10 68.9 55 60.0
Manes.01G134900 Manihot esculenta HOM05D000063 ORTHO05D006552 5.3e-10 68.2 55 60.0
Aa31LG1G15330 Aethionema arabicum HOM05D000063 ORTHO05D006552 6.9e-10 67.8 55 58.2
Sabra05G0101400 Salix brachista HOM05D000063 ORTHO05D006552 6.9e-10 67.8 55 58.2
Lj4P201T24 Lonicera japonica HOM05D000063 ORTHO05D006552 9.1e-10 67.4 55 61.8
MD02G1148800 Malus domestica HOM05D000063 ORTHO05D006552 1.2e-09 67.0 55 60.0
MD15G1263000 Malus domestica HOM05D000063 ORTHO05D006552 1.2e-09 67.0 55 58.2
FvH4_1g13400 Fragaria vesca HOM05D000063 ORTHO05D006552 1.5e-09 66.6 55 60.0
Prupe.7G153700 Prunus persica HOM05D000063 ORTHO05D006552 1.5e-09 66.6 55 58.2
Cpa.g.sc6.108 Carica papaya HOM05D000063 ORTHO05D006552 2.0e-09 66.2 55 60.0
CiPaw.01G037200 Carya illinoinensis HOM05D000063 ORTHO05D006552 2.6e-09 65.9 55 58.2
FAN23G2312 Fragaria x ananassa HOM05D000063 ORTHO05D006552 2.6e-09 65.9 55 60.0
FAN28G0791 Fragaria x ananassa HOM05D000063 ORTHO05D006552 2.6e-09 65.9 55 60.0
RcHm_v2.0_Chr2g0101761 Rosa chinensis HOM05D000063 ORTHO05D006552 2.6e-09 65.9 55 61.8
TWI09G1068 Tripterygium wilfordii HOM05D000063 ORTHO05D006552 2.6e-09 65.9 56 57.1
GSVIVG01018975001 Vitis vinifera HOM05D000063 ORTHO05D006552 2.6e-09 65.9 55 58.2
CSS0008701 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D006552 4.5e-09 65.1 55 58.2
Cfa004302 Carpinus fangiana HOM05D000063 ORTHO05D006552 4.5e-09 65.1 55 60.0
Duzib147G0595 Durio zibethinus HOM05D000063 ORTHO05D006552 4.5e-09 65.1 55 58.2
Gohir.A12G064800 Gossypium hirsutum HOM05D000063 ORTHO05D006552 4.5e-09 65.1 55 60.0
Gohir.D12G064900 Gossypium hirsutum HOM05D000063 ORTHO05D006552 4.5e-09 65.1 55 60.0
Gorai.008G068100 Gossypium raimondii HOM05D000063 ORTHO05D006552 4.5e-09 65.1 55 60.0
Dinv39979 Davidia involucrata HOM05D000063 ORTHO05D006552 5.9e-09 64.7 55 56.4
Sabra07G0023100 Salix brachista HOM05D000063 ORTHO05D006552 5.9e-09 64.7 55 56.4
Thhalv10003860m.g Eutrema salsugineum HOM05D000063 ORTHO05D006552 7.7e-09 64.3 55 56.4
FAN26G0228 Fragaria x ananassa HOM05D000063 ORTHO05D006552 7.7e-09 64.3 54 59.3
FAN26G2774 Fragaria x ananassa HOM05D000063 ORTHO05D006552 7.7e-09 64.3 54 59.3
Nitab4.5_0000434g0170 Nicotiana tabacum HOM05D000063 ORTHO05D006552 7.7e-09 64.3 55 58.2
Potri.007G026300 Populus trichocarpa HOM05D000063 ORTHO05D006552 7.7e-09 64.3 55 56.4
Solyc02g085340.1 Solanum lycopersicum HOM05D000063 ORTHO05D006552 7.7e-09 64.3 55 58.2
Sopen02g030030 Solanum pennellii HOM05D000063 ORTHO05D006552 7.7e-09 64.3 55 58.2
Potri.005G123800 Populus trichocarpa HOM05D000063 ORTHO05D006552 1.0e-08 63.9 55 60.0
TWI73G0173 Tripterygium wilfordii HOM05D000063 ORTHO05D006552 1.0e-08 63.9 55 58.2
Aqoxy1G03618 Aquilegia oxysepala HOM05D000063 ORTHO05D031276 1.3e-08 63.5 46 63.0
Gohir.A02G164900 Gossypium hirsutum HOM05D000063 ORTHO05D006552 1.3e-08 63.5 55 56.4
Nn5g29588 Nelumbo nucifera HOM05D000063 ORTHO05D006552 1.7e-08 63.2 55 54.5
PGSC0003DMG400014900 Solanum tuberosum HOM05D000063 ORTHO05D006552 1.7e-08 63.2 55 56.4
THA.LOC104826967 Tarenaya hassleriana HOM05D000063 ORTHO05D006552 1.7e-08 63.2 55 49.1
Manes.02G093300 Manihot esculenta HOM05D000063 ORTHO05D006552 2.2e-08 62.8 55 58.2
Sp2g29910 Schrenkiella parvula HOM05D000063 ORTHO05D006552 2.2e-08 62.8 56 55.4
SGA_v2.0_scaffold33G13362 Striga asiatica HOM05D000063 ORTHO05D006552 2.2e-08 62.8 55 58.2
CAN.G358.98 Capsicum annuum HOM05D000063 ORTHO05D006552 2.9e-08 62.4 55 54.5
CiPaw.02G016900 Carya illinoinensis HOM05D000063 ORTHO05D006552 2.9e-08 62.4 56 58.9
Migut.H00996 Erythranthe guttata HOM05D000063 ORTHO05D006552 2.9e-08 62.4 55 58.2
Hma1.2p1_0400F.1_g144440 Hydrangea macrophylla HOM05D000063 ORTHO05D006552 2.9e-08 62.4 55 58.2
Nn8g39599 Nelumbo nucifera HOM05D000063 ORTHO05D006552 3.8e-08 62.0 55 52.7
AT5G66770 Arabidopsis thaliana HOM05D000063 ORTHO05D006552 5.0e-08 61.6 56 55.4
CANSAT01G2661 Cannabis sativa HOM05D000063 ORTHO05D006552 5.0e-08 61.6 55 50.9
CARHR280930 Cardamine hirsuta HOM05D000063 ORTHO05D006552 5.0e-08 61.6 56 53.6
Cc07_g09460 Coffea canephora HOM05D000063 ORTHO05D006552 5.0e-08 61.6 56 55.4
Nitab4.5_0003835g0020 Nicotiana tabacum HOM05D000063 ORTHO05D006552 5.0e-08 61.6 55 56.4
MSTRG.23530 Avicennia marina HOM05D000063 ORTHO05D006552 6.5e-08 61.2 55 56.4
Actinidia36558 Actinidia chinensis HOM05D000063 ORTHO05D006552 8.5e-08 60.8 56 55.4
Thhalv10011122m.g Eutrema salsugineum HOM05D000063 ORTHO05D006552 8.5e-08 60.8 57 54.4
MELO3C017561.2 Cucumis melo HOM05D000063 ORTHO05D006552 1.1e-07 60.5 58 53.4
Gohir.D03G015100 Gossypium hirsutum HOM05D000063 ORTHO05D006552 1.4e-07 60.1 55 54.5
BcaB02g09992 Brassica carinata HOM05D000063 ORTHO05D006552 1.9e-07 59.7 56 53.6
CsaV3_4G005070 Cucumis sativus L. HOM05D000063 ORTHO05D006552 1.9e-07 59.7 58 53.4
Gorai.003G015400 Gossypium raimondii HOM05D000063 ORTHO05D006552 1.9e-07 59.7 55 52.7
Peaxi162Scf00515g00055 Petunia axillaris HOM05D000063 ORTHO05D006552 1.9e-07 59.7 56 57.1
PGR119G1782 Punica granatum HOM05D000063 ORTHO05D006552 1.9e-07 59.7 58 53.4
THA.LOC104821277 Tarenaya hassleriana HOM05D000063 ORTHO05D006552 1.9e-07 59.7 57 52.6
Atru.chr3.566 Acer truncatum HOM05D000063 ORTHO05D006552 2.5e-07 59.3 57 54.4
RhsimUnG0020200 Rhododendron simsii HOM05D000063 ORTHO05D006552 2.5e-07 59.3 55 54.5
MSTRG.2758 Avicennia marina HOM05D000063 ORTHO05D006552 3.2e-07 58.9 55 58.2
ClCG07G009170 Citrullus lanatus HOM05D000063 ORTHO05D006552 3.2e-07 58.9 57 52.6
Actinidia12122 Actinidia chinensis HOM05D000063 ORTHO05D006552 4.2e-07 58.5 56 53.6
AL8G44680 Arabidopsis lyrata HOM05D000063 ORTHO05D006552 4.2e-07 58.5 56 53.6
Sed0007493 Sechium edule HOM05D000063 ORTHO05D006552 4.2e-07 58.5 59 50.8
BcaB01g00602 Brassica carinata HOM05D000063 ORTHO05D006552 5.5e-07 58.2 58 51.7
DCAR_017272 Daucus carota HOM05D000063 ORTHO05D006552 5.5e-07 58.2 56 58.9
Oeu012885.1 Olea europaea HOM05D000063 ORTHO05D006552 9.4e-07 57.4 56 51.8
Oeu050528.1 Olea europaea HOM05D000063 ORTHO05D006552 9.4e-07 57.4 59 55.9
Lsat_1_v5_gn_3_78100 Lactuca sativa HOM05D000063 ORTHO05D006552 1.2e-06 57.0 56 53.6
HPP92_007725 Vanilla planifolia HOM05D000063 ORTHO05D006552 1.2e-06 57.0 55 49.1
BcaC06g34743 Brassica carinata HOM05D000063 ORTHO05D006552 2.1e-06 56.2 56 51.8
BolC7t43034H Brassica oleracea HOM05D000063 ORTHO05D006552 2.1e-06 56.2 56 51.8
Haze_15099 Corylus avellana HOM05D000063 ORTHO05D006552 2.1e-06 56.2 55 52.7
CsaV3_6G046190 Cucumis sativus L. HOM05D000063 ORTHO05D006552 2.1e-06 56.2 57 49.1
CSS0003129 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D006898 2.7e-06 55.8 63 50.8
CSS0026522 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D006898 2.7e-06 55.8 63 50.8
ECA246G2750 Erigeron canadensis HOM05D000063 ORTHO05D006552 2.7e-06 55.8 57 52.6
Glyma.11G092000 Glycine max HOM05D000063 ORTHO05D006552 2.7e-06 55.8 55 54.5
C07p25020 Brassica napus HOM05D000063 ORTHO05D006552 3.6e-06 55.5 56 50.0
BraA07t29443Z Brassica rapa HOM05D000063 ORTHO05D006552 3.6e-06 55.5 56 50.0
CARHR160160 Cardamine hirsuta HOM05D000063 ORTHO05D006552 3.6e-06 55.5 59 49.2
AUR62004045 Chenopodium quinoa HOM05D000063 ORTHO05D006552 3.6e-06 55.5 56 50.0
AUR62007560 Chenopodium quinoa HOM05D000063 ORTHO05D006552 3.6e-06 55.5 56 50.0
Sed0018218 Sechium edule HOM05D000063 ORTHO05D006552 3.6e-06 55.5 63 46.0
A07p17160 Brassica napus HOM05D000063 ORTHO05D006552 4.7e-06 55.1 56 48.2
Lj3g0001151 Lotus japonicus HOM05D000063 ORTHO05D006552 4.7e-06 55.1 55 52.7
Sp5g11570 Schrenkiella parvula HOM05D000063 ORTHO05D006552 4.7e-06 55.1 57 49.1
Ciclev10025169m.g Citrus clementina HOM05D000063 ORTHO05D006552 7.9e-06 54.3 64 45.3
Os03g0723000 Oryza sativa ssp. japonica HOM05D000063 ORTHO05D006552 7.9e-06 54.3 55 49.1


User provided reference genes

Program Settings