Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 6.1e-76 287.3 140 100.0
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 1.7e-38 162.9 107 78.5
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 4.8e-36 154.8 140 62.1
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 1.8e-35 152.9 134 58.2
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 3.1e-35 152.1 139 61.2
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 4.0e-35 151.8 113 70.8
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 6.9e-35 151.0 88 83.0
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 6.9e-35 151.0 108 70.4
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 6.9e-35 151.0 88 83.0
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 9.0e-35 150.6 111 69.4
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 1.5e-34 149.8 111 72.1
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 2.0e-34 149.4 139 56.1
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 2.0e-34 149.4 98 77.6
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 3.4e-34 148.7 146 58.2
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 3.4e-34 148.7 141 57.4
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 5.8e-34 147.9 90 82.2
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 5.8e-34 147.9 90 82.2
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 5.8e-34 147.9 102 75.5
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 5.8e-34 147.9 85 83.5
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 7.6e-34 147.5 88 81.8
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 1.3e-33 146.7 142 57.7
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 1.7e-33 146.4 101 75.2
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 2.2e-33 146.0 94 78.7
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 2.9e-33 145.6 132 61.4
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 3.8e-33 145.2 88 80.7
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 3.8e-33 145.2 83 83.1
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 3.8e-33 145.2 106 69.8
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 3.8e-33 145.2 103 71.8
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 6.4e-33 144.4 100 74.0
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 8.4e-33 144.1 118 66.1
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 8.4e-33 144.1 83 83.1
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 8.4e-33 144.1 97 76.3
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 1.1e-32 143.7 110 69.1
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 1.1e-32 143.7 99 74.7
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 1.9e-32 142.9 97 75.3
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 2.4e-32 142.5 81 81.5
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 2.4e-32 142.5 86 82.6
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 3.2e-32 142.1 86 77.9
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 3.2e-32 142.1 138 58.7
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 3.2e-32 142.1 122 61.5
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 3.2e-32 142.1 88 78.4
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 4.2e-32 141.7 88 76.1
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 4.2e-32 141.7 83 80.7
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 4.2e-32 141.7 106 65.1
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 5.4e-32 141.4 86 77.9
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 5.4e-32 141.4 139 56.8
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 5.4e-32 141.4 141 56.0
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 5.4e-32 141.4 87 80.5
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 7.1e-32 141.0 94 73.4
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 7.1e-32 141.0 110 67.3
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 7.1e-32 141.0 86 77.9
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 9.3e-32 140.6 102 70.6
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 9.3e-32 140.6 141 56.0
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 9.3e-32 140.6 83 83.1
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 1.2e-31 140.2 83 79.5
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 1.2e-31 140.2 88 79.5
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 1.2e-31 140.2 146 55.5
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 1.6e-31 139.8 122 61.5
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 1.6e-31 139.8 122 61.5
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 1.6e-31 139.8 122 61.5
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 1.6e-31 139.8 132 59.8
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 2.1e-31 139.4 118 61.9
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 2.1e-31 139.4 84 78.6
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 2.1e-31 139.4 110 67.3
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 2.7e-31 139.0 107 66.4
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 2.7e-31 139.0 111 65.8
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 2.7e-31 139.0 104 68.3
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 2.7e-31 139.0 84 77.4
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 2.7e-31 139.0 84 77.4
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 2.7e-31 139.0 111 62.2
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 3.5e-31 138.7 114 64.9
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 3.5e-31 138.7 114 64.9
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 3.5e-31 138.7 84 78.6
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 3.5e-31 138.7 84 78.6
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 3.5e-31 138.7 87 79.3
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 7.9e-31 137.5 85 80.0
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 1.0e-30 137.1 86 75.6
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 1.0e-30 137.1 108 67.6
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 1.0e-30 137.1 127 59.1
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 1.0e-30 137.1 85 75.3
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 1.3e-30 136.7 80 80.0
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 1.3e-30 136.7 111 61.3
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 3.9e-30 135.2 80 78.8
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 3.9e-30 135.2 80 78.8
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 3.9e-30 135.2 113 62.8
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 3.9e-30 135.2 92 72.8
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 8.7e-30 134.0 80 77.5
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 8.7e-30 134.0 80 77.5
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 1.5e-29 133.3 83 73.5
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 2.5e-29 132.5 80 81.2
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 4.8e-28 128.3 90 72.2
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 6.9e-27 124.4 98 64.3
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 1.3e-25 120.2 73 78.1
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 1.7e-25 119.8 95 64.2
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 2.4e-24 115.9 75 70.7
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 7.1e-24 114.4 139 48.2
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 7.9e-23 110.9 94 60.6
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 7.9e-23 110.9 70 75.7
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 1.8e-22 109.8 75 69.3
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 2.3e-22 109.4 136 49.3
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 3.0e-22 109.0 78 66.7
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 1.9e-16 89.7 54 77.8
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 5.5e-16 88.2 104 50.0
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 2.7e-15 85.9 67 71.6
FvH4_3g03820 Fragaria vesca HOM05D007380 ORTHO05D009269 1.4e-11 73.6 44 81.8
BcaNung00854 Brassica carinata HOM05D007380 ORTHO05D009269 8.7e-06 54.3 74 44.6


User provided reference genes

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