Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1318 Ceratophyllum demersum HOM05D005615 ORTHO05D007558 5.4e-53 210.7 104 100.0
CDE07G0588 Ceratophyllum demersum HOM05D005615 ORTHO05D007558 9.0e-32 140.2 80 85.0
TAR362G0587 Trochodendron aralioides HOM05D005615 ORTHO05D007558 5.1e-27 124.4 78 79.5
Potri.017G033300 Populus trichocarpa HOM05D005615 ORTHO05D007558 6.7e-27 124.0 79 81.0
MBI11_g35028_MAGBIO Magnolia biondii HOM05D005615 ORTHO05D007558 8.7e-27 123.6 75 81.3
Sabra17G0020900 Salix brachista HOM05D005615 ORTHO05D007558 1.5e-26 122.9 77 79.2
Atru.chr3.1563 Acer truncatum HOM05D005615 ORTHO05D007558 4.3e-26 121.3 76 77.6
Atru.chr3.1585 Acer truncatum HOM05D005615 ORTHO05D007558 4.3e-26 121.3 76 77.6
Aqoxy2G04109 Aquilegia oxysepala HOM05D005615 ORTHO05D007558 4.3e-26 121.3 75 80.0
Ciclev10020553m.g Citrus clementina HOM05D005615 ORTHO05D007558 4.3e-26 121.3 93 68.8
Gohir.A01G231200 Gossypium hirsutum HOM05D005615 ORTHO05D007558 5.7e-26 120.9 79 75.9
Gohir.D01G221300 Gossypium hirsutum HOM05D005615 ORTHO05D007558 5.7e-26 120.9 79 75.9
Gorai.002G267900 Gossypium raimondii HOM05D005615 ORTHO05D007558 5.7e-26 120.9 79 75.9
unitig_736.g22473 Utricularia gibba HOM05D005615 ORTHO05D007558 5.7e-26 120.9 84 70.2
PSO675G8272 Papaver somniferum HOM05D005615 ORTHO05D007558 7.4e-26 120.6 70 84.3
CANSAT78G0163 Cannabis sativa HOM05D005615 ORTHO05D007558 9.6e-26 120.2 71 83.1
Sabra07G0102500 Salix brachista HOM05D005615 ORTHO05D007558 9.6e-26 120.2 88 71.6
Peaxi162Scf00375g00079 Petunia axillaris HOM05D005615 ORTHO05D007558 1.3e-25 119.8 77 74.0
QL10p047743 Quercus lobata HOM05D005615 ORTHO05D007558 1.3e-25 119.8 71 83.1
PSO017G2630 Papaver somniferum HOM05D005615 ORTHO05D007558 1.6e-25 119.4 70 82.9
SEGI_32939 Sequoiadendron giganteum HOM05D005615 ORTHO05D007558 1.6e-25 119.4 77 77.9
CiPaw.02G056100 Carya illinoinensis HOM05D005615 ORTHO05D007558 2.1e-25 119.0 78 78.2
Haze_00733 Corylus avellana HOM05D005615 ORTHO05D007558 2.1e-25 119.0 75 77.3
Duzib093G1513 Durio zibethinus HOM05D005615 ORTHO05D007558 2.1e-25 119.0 76 76.3
Mapoly0041s0099 Marchantia polymorpha HOM05D005615 ORTHO05D007558 2.1e-25 119.0 75 77.3
CARHR138440 Cardamine hirsuta HOM05D005615 ORTHO05D007558 2.8e-25 118.6 76 76.3
Aa31LG1G25060 Aethionema arabicum HOM05D005615 ORTHO05D007558 3.7e-25 118.2 76 76.3
BcaC02g12407 Brassica carinata HOM05D005615 ORTHO05D007558 3.7e-25 118.2 76 76.3
Cfa015769 Carpinus fangiana HOM05D005615 ORTHO05D007558 3.7e-25 118.2 75 76.0
COL.COLO4_14419 Corchorus olitorius HOM05D005615 ORTHO05D007558 3.7e-25 118.2 76 75.0
Glyma.12G020600 Glycine max HOM05D005615 ORTHO05D007558 3.7e-25 118.2 79 75.9
Manes.04G040500 Manihot esculenta HOM05D005615 ORTHO05D007558 3.7e-25 118.2 77 75.3
RcHm_v2.0_Chr4g0408131 Rosa chinensis HOM05D005615 ORTHO05D007558 3.7e-25 118.2 75 78.7
BolC4t22075H Brassica oleracea HOM05D005615 ORTHO05D007558 4.8e-25 117.9 76 75.0
Thhalv10001495m.g Eutrema salsugineum HOM05D005615 ORTHO05D007558 4.8e-25 117.9 76 75.0
Nn7g37651 Nelumbo nucifera HOM05D005615 ORTHO05D007558 4.8e-25 117.9 75 77.3
ATR0743G064 Amborella trichopoda HOM05D005615 ORTHO05D007558 6.2e-25 117.5 75 77.3
Migut.N03069 Erythranthe guttata HOM05D005615 ORTHO05D007558 6.2e-25 117.5 70 81.4
Glyma.11G094200 Glycine max HOM05D005615 ORTHO05D007558 6.2e-25 117.5 71 81.7
Prupe.1G186700 Prunus persica HOM05D005615 ORTHO05D007558 6.2e-25 117.5 75 77.3
Hund03143 Selenicereus undatus HOM05D005615 ORTHO05D007558 6.2e-25 117.5 78 75.6
Zm00001eb198320 Zea mays HOM05D005615 ORTHO05D007558 6.2e-25 117.5 78 74.4
A05p03730 Brassica napus HOM05D005615 ORTHO05D007558 8.2e-25 117.1 76 75.0
C04p04420 Brassica napus HOM05D005615 ORTHO05D007558 8.2e-25 117.1 76 75.0
Carub.0004s2582 Capsella rubella HOM05D005615 ORTHO05D007558 8.2e-25 117.1 76 75.0
DCAR_029917 Daucus carota HOM05D005615 ORTHO05D007558 8.2e-25 117.1 87 64.4
FAN17G1451 Fragaria x ananassa HOM05D005615 ORTHO05D007558 8.2e-25 117.1 75 77.3
Nitab4.5_0002368g0110 Nicotiana tabacum HOM05D005615 ORTHO05D007558 8.2e-25 117.1 77 72.7
Oeu018049.1 Olea europaea HOM05D005615 ORTHO05D007558 8.2e-25 117.1 70 81.4
Os08g0540100 Oryza sativa ssp. japonica HOM05D005615 ORTHO05D007558 8.2e-25 117.1 78 74.4
Potri.007G126400 Populus trichocarpa HOM05D005615 ORTHO05D007558 8.2e-25 117.1 79 75.9
Sp4g25460 Schrenkiella parvula HOM05D005615 ORTHO05D007558 8.2e-25 117.1 76 75.0
Solyc06g073470.3 Solanum lycopersicum HOM05D005615 ORTHO05D007558 8.2e-25 117.1 77 72.7
Sopen06g029830 Solanum pennellii HOM05D005615 ORTHO05D007558 8.2e-25 117.1 77 72.7
PGSC0003DMG400026904 Solanum tuberosum HOM05D005615 ORTHO05D007558 8.2e-25 117.1 77 72.7
TWI36G1239 Tripterygium wilfordii HOM05D005615 ORTHO05D007558 8.2e-25 117.1 76 76.3
GSVIVG01010734001 Vitis vinifera HOM05D005615 ORTHO05D007558 8.2e-25 117.1 71 78.9
AT2G43360 Arabidopsis thaliana HOM05D005615 ORTHO05D007558 1.1e-24 116.7 76 75.0
Rhsim09G0030100 Rhododendron simsii HOM05D005615 ORTHO05D007558 1.1e-24 116.7 76 76.3
THA.LOC104803617 Tarenaya hassleriana HOM05D005615 ORTHO05D007558 1.1e-24 116.7 81 69.1
arahy.Tifrunner.gnm1.ann1.2A1XYJ Arachis hypogaea HOM05D005615 ORTHO05D007558 1.4e-24 116.3 79 70.9
arahy.Tifrunner.gnm1.ann1.VQKS2I Arachis hypogaea HOM05D005615 ORTHO05D007558 1.4e-24 116.3 79 70.9
Eucgr.A00054 Eucalyptus grandis HOM05D005615 ORTHO05D007558 1.4e-24 116.3 71 80.3
Eucgr.A00256 Eucalyptus grandis HOM05D005615 ORTHO05D007558 1.4e-24 116.3 71 80.3
Nitab4.5_0010690g0020 Nicotiana tabacum HOM05D005615 ORTHO05D007558 1.4e-24 116.3 77 72.7
SGA_v2.0_scaffold12G06187 Striga asiatica HOM05D005615 ORTHO05D007558 1.4e-24 116.3 70 80.0
SGA_v2.0_scaffold283G46961 Striga asiatica HOM05D005615 ORTHO05D007558 1.4e-24 116.3 70 80.0
Zm00001eb037230 Zea mays HOM05D005615 ORTHO05D007558 1.4e-24 116.3 76 75.0
Actinidia34618 Actinidia chinensis HOM05D005615 ORTHO05D007558 1.8e-24 115.9 76 73.7
EL10Ac3g05574 Beta vulgaris HOM05D005615 ORTHO05D007558 1.8e-24 115.9 76 75.0
Dinv44241 Davidia involucrata HOM05D005615 ORTHO05D007558 1.8e-24 115.9 75 77.3
Lj3g0021315 Lotus japonicus HOM05D005615 ORTHO05D007558 1.8e-24 115.9 76 76.3
VMungo1127G1033 Vigna mungo HOM05D005615 ORTHO05D007558 1.8e-24 115.9 71 78.9
HanXRQChr14g0434901 Helianthus annuus HOM05D005615 ORTHO05D007558 2.4e-24 115.5 76 72.4
Phvul.011G023300 Phaseolus vulgaris HOM05D005615 ORTHO05D007558 2.4e-24 115.5 71 78.9
Thecc.05G003200 Theobroma cacao HOM05D005615 ORTHO05D007558 2.4e-24 115.5 75 74.7
BcaB01g03390 Brassica carinata HOM05D005615 ORTHO05D007558 3.1e-24 115.2 76 73.7
Cc03_g13240 Coffea canephora HOM05D005615 ORTHO05D007558 3.1e-24 115.2 70 80.0
Dinv22646 Davidia involucrata HOM05D005615 ORTHO05D007558 3.1e-24 115.2 75 74.7
PGR083G0205 Punica granatum HOM05D005615 ORTHO05D007558 3.1e-24 115.2 71 78.9
AL4G42040 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 4.1e-24 114.8 71 78.9
MSTRG.22029 Avicennia marina HOM05D005615 ORTHO05D007558 4.1e-24 114.8 89 65.2
BraA05t19360Z Brassica rapa HOM05D005615 ORTHO05D007558 4.1e-24 114.8 76 73.7
AUR62016250 Chenopodium quinoa HOM05D005615 ORTHO05D007558 4.1e-24 114.8 76 73.7
ClCG08G004320 Citrullus lanatus HOM05D005615 ORTHO05D007558 4.1e-24 114.8 84 70.2
MELO3C011628.2 Cucumis melo HOM05D005615 ORTHO05D007558 4.1e-24 114.8 84 70.2
CsaV3_6G003770 Cucumis sativus L. HOM05D005615 ORTHO05D007558 4.1e-24 114.8 84 70.2
ECA238G2991 Erigeron canadensis HOM05D005615 ORTHO05D007558 4.1e-24 114.8 75 73.3
Lalb_Chr01g0001081 Lupinus albus HOM05D005615 ORTHO05D007558 4.1e-24 114.8 76 73.7
Lalb_Chr03g0024511 Lupinus albus HOM05D005615 ORTHO05D007558 4.1e-24 114.8 76 73.7
MD04G1037300 Malus domestica HOM05D005615 ORTHO05D007558 4.1e-24 114.8 75 74.7
BolC3t15243H Brassica oleracea HOM05D005615 ORTHO05D007558 5.3e-24 114.4 101 58.4
Lsat_1_v5_gn_2_52041 Lactuca sativa HOM05D005615 ORTHO05D007558 5.3e-24 114.4 76 71.1
Sc13g0007050 Simmondsia chinensis HOM05D005615 ORTHO05D007558 5.3e-24 114.4 75 74.7
AUR62034151 Chenopodium quinoa HOM05D005615 ORTHO05D007558 6.9e-24 114.0 76 73.7
Lj6A60G37 Lonicera japonica HOM05D005615 ORTHO05D007558 6.9e-24 114.0 71 78.9
Medtr4g076870 Medicago truncatula HOM05D005615 ORTHO05D007558 6.9e-24 114.0 76 73.7
TPR.G13757 Trifolium pratense HOM05D005615 ORTHO05D007558 6.9e-24 114.0 83 67.5
BcaC01g05236 Brassica carinata HOM05D005615 ORTHO05D007558 9.0e-24 113.6 76 72.4
A03p24210 Brassica napus HOM05D005615 ORTHO05D007558 9.0e-24 113.6 76 72.4
BraA03t11630Z Brassica rapa HOM05D005615 ORTHO05D007558 9.0e-24 113.6 76 72.4
CAN.G65.188 Capsicum annuum HOM05D005615 ORTHO05D007558 9.0e-24 113.6 77 71.4
Cpa.g.sc71.16 Carica papaya HOM05D005615 ORTHO05D007558 1.2e-23 113.2 80 73.8
Ca_26061_v3 Cicer arietinum L. HOM05D005615 ORTHO05D007558 1.2e-23 113.2 76 73.7
Pp3c11_17440 Physcomitrium patens HOM05D005615 ORTHO05D007558 1.5e-23 112.8 71 78.9
Sed0015751 Sechium edule HOM05D005615 ORTHO05D007558 1.5e-23 112.8 84 66.7
Pp3c1_16250 Physcomitrium patens HOM05D005615 ORTHO05D007558 1.0e-22 110.2 81 69.1
Ciclev10024495m.g Citrus clementina HOM05D005615 ORTHO05D007558 1.3e-22 109.8 79 72.2
Psat7g172600 Pisum sativum HOM05D005615 ORTHO05D007558 1.3e-22 109.8 80 66.2
SMO358G0150 Selaginella moellendorffii HOM05D005615 ORTHO05D007558 2.2e-22 109.0 75 72.0
HPP92_002776 Vanilla planifolia HOM05D005615 ORTHO05D007558 2.2e-22 109.0 63 81.0
CBR_g54836 Chara braunii HOM05D005615 ORTHO05D000002 3.8e-22 108.2 77 68.8
Psat3g051440 Pisum sativum HOM05D005615 ORTHO05D031631 1.9e-21 105.9 76 67.1
AagrBONN_evm.TU.Sc2ySwM_362.1417 Anthoceros agrestis HOM05D003321 ORTHO05D005161 4.3e-18 94.7 62 75.8
AagrBONN_evm.TU.Sc2ySwM_344.4725 Anthoceros agrestis HOM05D005615 ORTHO05D007558 1.4e-16 89.7 67 64.2
Ciclev10024062m.g Citrus clementina HOM05D005615 ORTHO05D007558 2.4e-16 89.0 93 54.8
MCO13G117 Micromonas commoda HOM05D005615 ORTHO05D007558 6.5e-14 80.9 64 57.8
SalBow8G4084 Salvia bowleyana HOM05D005615 ORTHO05D007558 6.5e-14 80.9 44 79.5
Cre06.g261150 Chlamydomonas reinhardtii HOM05D005615 ORTHO05D007558 1.9e-13 79.3 64 59.4
Eucgr.A00259 Eucalyptus grandis HOM05D005615 ORTHO05D007558 2.7e-12 75.5 60 56.7
Zm00001eb285620 Zea mays HOM05D001443 ORTHO05D001352 2.7e-12 75.5 60 61.7
HPP92_028241 Vanilla planifolia HOM05D005615 ORTHO05D001525 1.5e-10 69.7 43 83.7


User provided reference genes

Program Settings