Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1313 Ceratophyllum demersum HOM05D005682 ORTHO05D007050 7.3e-164 580.5 292 100.0
Nn4g24940 Nelumbo nucifera HOM05D005682 ORTHO05D007050 5.6e-63 245.4 290 46.6
PSO063G1542 Papaver somniferum HOM05D005682 ORTHO05D007050 4.0e-61 239.2 294 44.9
Cfa008712 Carpinus fangiana HOM05D005682 ORTHO05D007050 1.5e-60 237.3 286 47.9
Potri.007G070400 Populus trichocarpa HOM05D005682 ORTHO05D007050 3.4e-60 236.1 271 45.8
Rhsim09G0074000 Rhododendron simsii HOM05D005682 ORTHO05D007050 3.4e-60 236.1 265 45.7
Sabra07G0059000 Salix brachista HOM05D005682 ORTHO05D007050 4.4e-60 235.7 271 45.8
Lj6A721G56 Lonicera japonica HOM05D005682 ORTHO05D007050 2.2e-59 233.4 272 44.1
Actinidia04079 Actinidia chinensis HOM05D005682 ORTHO05D007050 6.4e-59 231.9 271 45.0
MSTRG.433 Avicennia marina HOM05D005682 ORTHO05D007050 1.1e-58 231.1 301 44.9
CiPaw.05G167300 Carya illinoinensis HOM05D005682 ORTHO05D007050 4.1e-58 229.2 273 44.3
Duzib132G1218 Durio zibethinus HOM05D005682 ORTHO05D007050 1.6e-57 227.3 278 46.8
TWI74G0147 Tripterygium wilfordii HOM05D005682 ORTHO05D007050 1.6e-57 227.3 288 43.1
ECA246G2025 Erigeron canadensis HOM05D005682 ORTHO05D007050 2.1e-57 226.9 281 40.2
Migut.L00859 Erythranthe guttata HOM05D005682 ORTHO05D007050 2.1e-57 226.9 277 41.5
GSVIVG01010197001 Vitis vinifera HOM05D005682 ORTHO05D007050 2.1e-57 226.9 268 45.9
RcHm_v2.0_Chr4g0446491 Rosa chinensis HOM05D005682 ORTHO05D007050 7.8e-57 224.9 289 43.6
Duzib052G0545 Durio zibethinus HOM05D005682 ORTHO05D007050 3.9e-56 222.6 276 46.4
HanXRQChr17g0540811 Helianthus annuus HOM05D005682 ORTHO05D007050 6.6e-56 221.9 285 40.4
AUR62018178 Chenopodium quinoa HOM05D005682 ORTHO05D007050 1.5e-55 220.7 329 39.2
Aqoxy2G03805 Aquilegia oxysepala HOM05D005682 ORTHO05D007050 1.9e-55 220.3 270 43.3
Prupe.1G345800 Prunus persica HOM05D005682 ORTHO05D007050 5.6e-55 218.8 295 41.4
Atru.chr11.1182 Acer truncatum HOM05D005682 ORTHO05D007050 2.8e-54 216.5 287 42.9
BcaC05g28407 Brassica carinata HOM05D005682 ORTHO05D007050 2.8e-54 216.5 286 43.4
BcaC05g28416 Brassica carinata HOM05D005682 ORTHO05D007050 2.8e-54 216.5 286 43.7
ATR0618G435 Amborella trichopoda HOM05D005682 ORTHO05D000625 3.6e-54 216.1 313 40.9
FAN17G1521 Fragaria x ananassa HOM05D005682 ORTHO05D007050 8.1e-54 214.9 289 42.6
HPP92_008562 Vanilla planifolia HOM05D005682 ORTHO05D007050 8.1e-54 214.9 268 42.9
FvH4_4g36771 Fragaria vesca HOM05D005682 ORTHO05D007050 1.1e-53 214.5 289 42.2
Sc06g0007890 Simmondsia chinensis HOM05D005682 ORTHO05D007050 2.3e-53 213.4 269 40.9
Ah.14g085910 Amaranthus hybridus HOM05D005682 ORTHO05D007050 3.1e-53 213.0 291 40.2
Dinv11711 Davidia involucrata HOM05D005682 ORTHO05D007050 3.1e-53 213.0 240 45.8
TAR622G0093 Trochodendron aralioides HOM05D005682 ORTHO05D007050 4.0e-53 212.6 245 46.1
Gohir.A13G059600 Gossypium hirsutum HOM05D005682 ORTHO05D007050 5.2e-53 212.2 276 44.9
Gohir.D13G062400 Gossypium hirsutum HOM05D005682 ORTHO05D007050 5.2e-53 212.2 274 44.2
BraA05t21829Z Brassica rapa HOM05D005682 ORTHO05D007050 1.2e-52 211.1 286 43.0
Gorai.013G070900 Gossypium raimondii HOM05D005682 ORTHO05D007050 1.2e-52 211.1 274 44.2
ClCG09G004600 Citrullus lanatus HOM05D005682 ORTHO05D007050 1.5e-52 210.7 284 41.5
BolC5t33225H Brassica oleracea HOM05D005682 ORTHO05D007050 4.4e-52 209.1 289 42.9
VMungo1127G0377 Vigna mungo HOM05D005682 ORTHO05D007050 4.4e-52 209.1 270 42.6
BcaB06g26047 Brassica carinata HOM05D005682 ORTHO05D007050 5.8e-52 208.8 285 42.1
CANSAT64G0530 Cannabis sativa HOM05D005682 ORTHO05D007050 5.8e-52 208.8 267 41.9
MD13G1007100 Malus domestica HOM05D005682 ORTHO05D007050 5.8e-52 208.8 294 42.5
Sed0007950 Sechium edule HOM05D005682 ORTHO05D007050 5.8e-52 208.8 263 44.1
Phvul.011G031200 Phaseolus vulgaris HOM05D005682 ORTHO05D007050 9.9e-52 208.0 270 43.3
MELO3C023602.2 Cucumis melo HOM05D005682 ORTHO05D007050 2.2e-51 206.8 293 40.6
Thhalv10019965m.g Eutrema salsugineum HOM05D005682 ORTHO05D007050 3.8e-51 206.1 280 41.8
AL3G33230 Arabidopsis lyrata HOM05D005682 ORTHO05D007050 2.4e-50 203.4 286 40.9
Lj3g0015709 Lotus japonicus HOM05D005682 ORTHO05D007050 2.4e-50 203.4 261 42.1
Carub.0003s1966 Capsella rubella HOM05D005682 ORTHO05D007050 5.4e-50 202.2 285 42.8
PGR044G2237 Punica granatum HOM05D005682 ORTHO05D007050 5.4e-50 202.2 260 41.2
THA.LOC104826522 Tarenaya hassleriana HOM05D005682 ORTHO05D007050 5.4e-50 202.2 285 42.1
Oeu033538.1 Olea europaea HOM05D005682 ORTHO05D007050 9.2e-50 201.4 282 41.5
CARHR095290 Cardamine hirsuta HOM05D005682 ORTHO05D007050 6.0e-49 198.7 276 44.6
FAN07G1253 Fragaria x ananassa HOM05D005682 ORTHO05D007050 1.7e-48 197.2 278 42.1
Aa31LG8G6560 Aethionema arabicum HOM05D005682 ORTHO05D007050 3.0e-48 196.4 285 40.0
SalBow2G1379 Salvia bowleyana HOM05D005682 ORTHO05D007050 6.6e-48 195.3 300 39.3
Sp3g17800 Schrenkiella parvula HOM05D005682 ORTHO05D007050 1.5e-47 194.1 279 41.9
arahy.Tifrunner.gnm1.ann1.H4B4B0 Arachis hypogaea HOM05D005682 ORTHO05D007050 1.9e-47 193.7 268 40.3
Lsat_1_v5_gn_3_33580 Lactuca sativa HOM05D005682 ORTHO05D007050 2.5e-47 193.4 261 40.2
PSO782G3049 Papaver somniferum HOM05D005682 ORTHO05D007050 5.6e-47 192.2 243 44.4
Lalb_Chr01g0001491 Lupinus albus HOM05D005682 ORTHO05D007050 9.6e-47 191.4 290 38.6
AT3G19780 Arabidopsis thaliana HOM05D005682 ORTHO05D007050 6.2e-46 188.7 280 40.4
Medtr4g074610 Medicago truncatula HOM05D005682 ORTHO05D007050 6.2e-46 188.7 292 36.3
Haze_11722 Corylus avellana HOM05D005682 ORTHO05D007050 8.1e-46 188.3 245 44.5
QL03p043857 Quercus lobata HOM05D005682 ORTHO05D007050 8.1e-46 188.3 286 40.6
Glyma.11G102200 Glycine max HOM05D005682 ORTHO05D007050 2.4e-45 186.8 290 36.2
Sabra07G0059100 Salix brachista HOM05D005682 ORTHO05D007050 4.0e-45 186.0 238 42.4
EL10Ac9g20684 Beta vulgaris HOM05D005682 ORTHO05D007050 1.2e-44 184.5 226 41.6
Zm00001eb221340 Zea mays HOM05D005682 ORTHO05D007050 2.6e-44 183.3 288 37.8
TPR.G32358 Trifolium pratense HOM05D005682 ORTHO05D007050 7.6e-44 181.8 266 37.2
DCAR_002567 Daucus carota HOM05D005682 ORTHO05D007050 2.2e-43 180.3 283 35.3
Solyc02g055470.2 Solanum lycopersicum HOM05D005682 ORTHO05D007050 6.4e-43 178.7 153 56.9
Sopen02g009200 Solanum pennellii HOM05D005682 ORTHO05D007050 6.4e-43 178.7 164 54.3
Psat7g173480 Pisum sativum HOM05D005682 ORTHO05D007050 1.4e-42 177.6 271 36.5
COL.COLO4_08119 Corchorus olitorius HOM05D005682 ORTHO05D007050 5.4e-42 175.6 170 52.4
unitig_699.g19973 Utricularia gibba HOM05D005682 ORTHO05D007050 9.3e-42 174.9 260 38.1
A05p29790 Brassica napus HOM05D005682 ORTHO05D007050 1.3e-40 171.0 205 46.8
Hund13152 Selenicereus undatus HOM05D005682 ORTHO05D007050 2.1e-38 163.7 223 39.5
vmacro10900 Vaccinium macrocarpon HOM05D005682 ORTHO05D007050 4.8e-38 162.5 228 39.5
AUR62038663 Chenopodium quinoa HOM05D005682 ORTHO05D007050 6.2e-38 162.2 234 39.3
Eucgr.J00855 Eucalyptus grandis HOM05D005682 ORTHO05D007050 3.4e-36 156.4 229 39.3
CAN.G157.17 Capsicum annuum HOM05D005682 ORTHO05D007050 8.4e-35 151.8 193 42.0
SHI13894 Sapria himalayana HOM05D005682 ORTHO05D007050 9.3e-34 148.3 253 32.4
Cc11_g04390 Coffea canephora HOM05D005682 ORTHO05D007050 7.4e-31 138.7 197 37.6
Nitab4.5_0000139g0150 Nicotiana tabacum HOM05D005682 ORTHO05D007050 1.2e-28 131.3 122 50.8
Cc11_g00090 Coffea canephora HOM05D005682 ORTHO05D007050 1.5e-28 131.0 193 36.8
CsaV3_7G030540 Cucumis sativus L. HOM05D005682 ORTHO05D007050 9.9e-28 128.3 197 38.1
Nitab4.5_0002392g0020 Nicotiana tabacum HOM05D005682 ORTHO05D007050 1.7e-27 127.5 191 37.7
SEGI_38899 Sequoiadendron giganteum HOM05D005682 ORTHO05D007050 1.8e-24 117.5 304 29.3
AagrBONN_evm.TU.Sc2ySwM_340.174 Anthoceros agrestis HOM05D005682 ORTHO05D007050 3.3e-23 113.2 165 35.8
Ca_03025_v3 Cicer arietinum L. HOM05D005682 ORTHO05D007050 1.6e-22 110.9 231 28.6
CSS0026201 Camellia sinensis var. sinensis HOM05D005682 ORTHO05D007050 4.5e-20 102.8 126 41.3
Peaxi162Scf00363g00073 Petunia axillaris HOM05D005682 ORTHO05D007050 4.5e-20 102.8 86 55.8
Aqoxy2G03797 Aquilegia oxysepala HOM05D005682 ORTHO05D007050 2.4e-13 80.5 117 36.8
CBR_g66815 Chara braunii HOM05D005682 ORTHO05D007050 7.6e-12 75.5 138 30.4
FvH4_4g15932 Fragaria vesca HOM05D005682 ORTHO05D007050 5.7e-07 59.3 105 33.3
FvH4_6g37553 Fragaria vesca HOM05D005682 ORTHO05D007050 9.7e-07 58.5 65 43.1
Thecc.02G161600 Theobroma cacao HOM05D005682 ORTHO05D007050 2.2e-06 57.4 76 39.5
Sopen02g009170 Solanum pennellii HOM05D005682 ORTHO05D007050 8.2e-06 55.5 78 34.6


User provided reference genes

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