Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 9.7e-78 293.5 158 100.0
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 4.3e-70 268.1 157 93.0
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 2.7e-51 205.7 155 72.9
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 4.2e-49 198.4 156 71.2
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 9.4e-49 197.2 158 69.6
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 2.1e-48 196.1 149 73.8
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 2.1e-48 196.1 149 73.8
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 4.7e-48 194.9 149 70.5
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 2.3e-47 192.6 153 68.0
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 1.3e-45 186.8 149 68.5
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 1.7e-45 186.4 154 66.2
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 1.7e-45 186.4 154 67.5
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 2.2e-45 186.0 138 73.9
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 2.8e-45 185.7 155 66.5
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 8.3e-45 184.1 149 66.4
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.1e-44 183.7 155 65.8
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 1.1e-44 183.7 153 65.4
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 1.8e-44 183.0 153 65.4
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 2.4e-44 182.6 153 65.4
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 3.1e-44 182.2 157 65.6
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.1e-44 181.8 154 64.9
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 5.4e-44 181.4 155 65.2
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 5.4e-44 181.4 150 67.3
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 7.0e-44 181.0 154 66.2
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 9.1e-44 180.6 152 66.4
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 2.0e-43 179.5 151 67.5
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 2.7e-43 179.1 151 66.2
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 2.7e-43 179.1 151 66.2
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 2.7e-43 179.1 138 69.6
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 3.5e-43 178.7 154 65.6
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 5.9e-43 177.9 151 66.9
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 7.7e-43 177.6 151 69.5
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 1.7e-42 176.4 155 65.8
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 2.2e-42 176.0 150 63.3
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 2.9e-42 175.6 136 69.9
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 5.0e-42 174.9 156 63.5
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 8.5e-42 174.1 154 64.3
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 8.5e-42 174.1 135 67.4
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.9e-41 172.9 154 62.3
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 1.9e-41 172.9 147 63.3
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 2.5e-41 172.6 155 64.5
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 4.2e-41 171.8 148 62.8
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 5.5e-41 171.4 156 60.9
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 5.5e-41 171.4 147 65.3
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 7.2e-41 171.0 150 66.7
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 7.2e-41 171.0 150 66.7
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.2e-40 170.2 155 61.9
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 1.6e-40 169.9 153 65.4
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 2.1e-40 169.5 133 67.7
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 2.1e-40 169.5 150 63.3
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 4.7e-40 168.3 152 64.5
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 4.7e-40 168.3 151 65.6
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 6.1e-40 167.9 152 66.4
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.0e-39 167.2 134 66.4
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 1.0e-39 167.2 134 66.4
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 1.0e-39 167.2 150 64.0
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 1.4e-39 166.8 159 63.5
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 5.2e-39 164.9 169 56.2
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 8.8e-39 164.1 139 65.5
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 8.8e-39 164.1 151 62.9
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 8.8e-39 164.1 167 56.3
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 1.2e-38 163.7 155 61.3
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 2.6e-38 162.5 157 61.1
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 2.6e-38 162.5 157 60.5
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 3.4e-38 162.2 154 61.0
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 7.5e-38 161.0 157 62.4
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 1.4e-36 156.8 145 63.4
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 9.2e-36 154.1 153 60.8
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 2.0e-35 152.9 153 58.2
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 3.5e-35 152.1 149 61.1
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 7.7e-35 151.0 155 58.1
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 1.3e-34 150.2 155 60.0
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 1.7e-34 149.8 153 58.8
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 2.9e-34 149.1 157 58.0
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 3.8e-34 148.7 153 56.9
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 6.6e-34 147.9 152 57.9
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 4.3e-33 145.2 169 53.8
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 5.6e-33 144.8 99 76.8
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 9.5e-33 144.1 154 59.1
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 1.2e-32 143.7 153 56.9
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 1.2e-32 143.7 162 56.2
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 1.2e-32 143.7 160 53.1
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 3.6e-32 142.1 157 57.3
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 6.1e-32 141.4 162 53.1
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 2.3e-31 139.4 153 55.6
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 3.0e-31 139.0 97 74.2
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 5.2e-31 138.3 152 54.6
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 5.2e-31 138.3 152 54.6
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 6.8e-31 137.9 169 52.1
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 2.0e-30 136.3 153 53.6
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 2.0e-30 136.3 153 53.6
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 7.5e-30 134.4 136 59.6
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 7.5e-30 134.4 146 52.7
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 1.3e-29 133.7 153 52.3
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 1.1e-28 130.6 147 57.1
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 4.1e-28 128.6 120 58.3
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 1.0e-26 124.0 155 50.3
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 1.5e-25 120.2 147 50.3
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 4.3e-25 118.6 180 41.1
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 5.6e-25 118.2 137 51.8
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 7.3e-25 117.9 145 51.0
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 9.5e-25 117.5 176 44.9
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 1.2e-24 117.1 141 53.2
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 2.8e-24 115.9 86 68.6
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 1.8e-23 113.2 84 67.9
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 3.1e-23 112.5 153 47.7
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.0e-23 112.1 154 48.1
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.5e-22 110.2 149 47.7
FAN13G0455 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.5e-22 110.2 105 58.1
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 2.0e-22 109.8 146 48.6
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 2.6e-22 109.4 136 46.3
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 3.4e-22 109.0 150 46.7
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 5.8e-22 108.2 146 48.6
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 8.3e-21 104.4 89 67.4
Sc15g0000010 Simmondsia chinensis HOM05D006168 ORTHO05D007602 1.4e-20 103.6 99 60.6
BcaC01g04336 Brassica carinata HOM05D006168 ORTHO05D007602 1.2e-16 90.5 112 50.9
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 2.1e-16 89.7 97 53.6
arahy.Tifrunner.gnm1.ann1.S1M3RU Arachis hypogaea HOM05D006168 ORTHO05D007602 1.1e-15 87.4 120 45.8
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 3.1e-15 85.9 113 45.1
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 5.8e-14 81.6 139 43.2
TPR.G35595 Trifolium pratense HOM05D006168 ORTHO05D007602 5.8e-14 81.6 106 48.1
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 5.4e-12 75.1 54 75.9
Haze_01753 Corylus avellana HOM05D006168 ORTHO05D007602 1.4e-07 60.5 54 68.5
MCO12G027 Micromonas commoda HOM05D006168 ORTHO05D007602 4.0e-07 58.9 137 37.2
A03p33970 Brassica napus HOM05D006168 ORTHO05D007602 1.5e-06 57.0 78 48.7
C03p41350 Brassica napus HOM05D006168 ORTHO05D007602 4.4e-06 55.5 112 42.9
Cpa.g.sc117.34 Carica papaya HOM05D006168 ORTHO05D007602 5.8e-06 55.1 55 60.0


User provided reference genes

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