Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1295 Ceratophyllum demersum HOM05D005791 ORTHO05D034273 2.7e-85 318.5 153 100.0
CDE12G0791 Ceratophyllum demersum HOM05D005791 ORTHO05D007452 2.5e-46 189.1 300 42.0
HPP92_024988 Vanilla planifolia HOM05D005791 ORTHO05D007452 4.5e-40 168.3 258 39.9
Potri.019G065700 Populus trichocarpa HOM05D005791 ORTHO05D007452 1.9e-38 162.9 315 35.2
MBI15_g31024_MAGBIO Magnolia biondii HOM05D005791 ORTHO05D007452 1.6e-37 159.8 300 35.7
MD07G1238300 Malus domestica HOM05D005791 ORTHO05D007452 2.8e-37 159.1 300 35.3
Lj1A970G57 Lonicera japonica HOM05D005791 ORTHO05D007452 3.6e-37 158.7 301 35.5
HPP92_024985 Vanilla planifolia HOM05D005791 ORTHO05D007452 3.6e-37 158.7 315 34.0
Aqoxy2G00691 Aquilegia oxysepala HOM05D005791 ORTHO05D007452 1.0e-36 157.1 315 34.9
Oeu044175.1 Olea europaea HOM05D005791 ORTHO05D007452 1.8e-36 156.4 300 34.0
Rhsim03G0154600 Rhododendron simsii HOM05D005791 ORTHO05D007452 2.3e-36 156.0 300 34.3
Rhsim03G0154800 Rhododendron simsii HOM05D005791 ORTHO05D007452 2.3e-36 156.0 300 34.3
FvH4_7g26290 Fragaria vesca HOM05D005791 ORTHO05D007452 3.0e-36 155.6 315 34.0
Actinidia31644 Actinidia chinensis HOM05D005791 ORTHO05D007452 4.0e-36 155.2 315 34.0
QL08p065276 Quercus lobata HOM05D005791 ORTHO05D007452 5.2e-36 154.8 302 34.1
BolC6t37528H Brassica oleracea HOM05D005791 ORTHO05D007452 6.8e-36 154.5 300 35.0
TAR636G2576 Trochodendron aralioides HOM05D005791 ORTHO05D007452 6.8e-36 154.5 300 34.7
FAN10G1145 Fragaria x ananassa HOM05D005791 ORTHO05D007452 8.9e-36 154.1 315 34.0
FAN06G4413 Fragaria x ananassa HOM05D005791 ORTHO05D007452 1.2e-35 153.7 315 33.7
Sabra19G0078900 Salix brachista HOM05D005791 ORTHO05D007452 1.2e-35 153.7 300 34.7
BcaB02g07651 Brassica carinata HOM05D005791 ORTHO05D007452 2.0e-35 152.9 300 35.0
BcaC08g44785 Brassica carinata HOM05D005791 ORTHO05D007452 2.0e-35 152.9 300 35.0
CSS0010135 Camellia sinensis var. sinensis HOM05D005791 ORTHO05D007452 2.0e-35 152.9 306 34.3
RcHm_v2.0_Chr1g0372751 Rosa chinensis HOM05D005791 ORTHO05D007452 2.6e-35 152.5 315 34.0
Aa31LG10G11340 Aethionema arabicum HOM05D005791 ORTHO05D007452 3.4e-35 152.1 300 35.0
Lj1g0000176 Lotus japonicus HOM05D005791 ORTHO05D007452 3.4e-35 152.1 315 34.9
Atru.chr12.209 Acer truncatum HOM05D005791 ORTHO05D007452 4.4e-35 151.8 300 34.3
A07p22940 Brassica napus HOM05D005791 ORTHO05D007452 4.4e-35 151.8 300 34.7
CARHR166580 Cardamine hirsuta HOM05D005791 ORTHO05D007452 5.7e-35 151.4 300 34.7
Sc14g0005690 Simmondsia chinensis HOM05D005791 ORTHO05D007452 5.7e-35 151.4 315 33.3
GSVIVG01032867001 Vitis vinifera HOM05D005791 ORTHO05D007452 5.7e-35 151.4 300 34.3
COL.COLO4_19494 Corchorus olitorius HOM05D005791 ORTHO05D007452 1.3e-34 150.2 315 33.7
Medtr3g093620 Medicago truncatula HOM05D005791 ORTHO05D007452 1.3e-34 150.2 315 34.9
PSO339G3520 Papaver somniferum HOM05D005791 ORTHO05D007452 1.3e-34 150.2 315 34.0
PSO384G5040 Papaver somniferum HOM05D005791 ORTHO05D007452 1.7e-34 149.8 315 34.0
PGR044G2580 Punica granatum HOM05D005791 ORTHO05D007452 1.7e-34 149.8 300 32.7
Sp5g06080 Schrenkiella parvula HOM05D005791 ORTHO05D007452 1.7e-34 149.8 300 34.3
CiPaw.02G199500 Carya illinoinensis HOM05D005791 ORTHO05D007452 2.2e-34 149.4 300 33.0
TPR.G13959 Trifolium pratense HOM05D005791 ORTHO05D007452 2.2e-34 149.4 300 35.0
AL5G37790 Arabidopsis lyrata HOM05D005791 ORTHO05D007452 2.9e-34 149.1 300 33.7
Psat5g069880 Pisum sativum HOM05D005791 ORTHO05D007452 3.7e-34 148.7 315 34.0
AT3G56460 Arabidopsis thaliana HOM05D005791 ORTHO05D007452 4.9e-34 148.3 300 33.7
Cfa001181 Carpinus fangiana HOM05D005791 ORTHO05D007452 4.9e-34 148.3 300 33.7
Nitab4.5_0000103g0040 Nicotiana tabacum HOM05D005791 ORTHO05D007452 6.4e-34 147.9 300 33.0
ATR1127G121 Amborella trichopoda HOM05D005791 ORTHO05D007452 8.3e-34 147.5 315 32.1
Eucgr.G03169 Eucalyptus grandis HOM05D005791 ORTHO05D007452 1.1e-33 147.1 300 33.3
Lalb_Chr08g0239301 Lupinus albus HOM05D005791 ORTHO05D007452 1.1e-33 147.1 315 33.7
Solyc03g095360.3 Solanum lycopersicum HOM05D005791 ORTHO05D007452 1.4e-33 146.7 315 32.7
Sopen03g025370 Solanum pennellii HOM05D005791 ORTHO05D007452 1.4e-33 146.7 315 32.7
Sopen03g025380 Solanum pennellii HOM05D005791 ORTHO05D007452 1.4e-33 146.7 315 32.7
CANSAT56G2835 Cannabis sativa HOM05D005791 ORTHO05D007452 1.8e-33 146.4 315 32.7
TWI09G0105 Tripterygium wilfordii HOM05D005791 ORTHO05D007452 1.8e-33 146.4 300 34.3
Carub.0005s2323 Capsella rubella HOM05D005791 ORTHO05D007452 2.4e-33 146.0 300 33.3
Cc02_g05050 Coffea canephora HOM05D005791 ORTHO05D007452 3.2e-33 145.6 315 32.7
arahy.Tifrunner.gnm1.ann1.B7UYEY Arachis hypogaea HOM05D005791 ORTHO05D007452 4.1e-33 145.2 315 34.0
Glyma.04G224400 Glycine max HOM05D005791 ORTHO05D007452 4.1e-33 145.2 315 34.0
Nitab4.5_0001493g0030 Nicotiana tabacum HOM05D005791 ORTHO05D007452 5.4e-33 144.8 300 32.7
Manes.10G004300 Manihot esculenta HOM05D005791 ORTHO05D007452 9.2e-33 144.1 300 32.7
Thecc.10G187200 Theobroma cacao HOM05D005791 ORTHO05D007452 9.2e-33 144.1 315 32.4
MSTRG.153 Avicennia marina HOM05D005791 ORTHO05D007452 1.2e-32 143.7 315 32.7
Ciclev10031975m.g Citrus clementina HOM05D005791 ORTHO05D007452 1.2e-32 143.7 300 33.3
Duzib106G2079 Durio zibethinus HOM05D005791 ORTHO05D007452 1.2e-32 143.7 315 33.0
Glyma.06G140300 Glycine max HOM05D005791 ORTHO05D007452 1.2e-32 143.7 315 33.7
Gorai.009G292000 Gossypium raimondii HOM05D005791 ORTHO05D007452 1.2e-32 143.7 300 33.3
THA.LOC104803216 Tarenaya hassleriana HOM05D005791 ORTHO05D007452 1.6e-32 143.3 300 32.7
C06p23560 Brassica napus HOM05D005791 ORTHO05D007452 2.0e-32 142.9 285 33.7
Ah.10g030630 Amaranthus hybridus HOM05D005791 ORTHO05D007452 3.5e-32 142.1 300 32.3
Gohir.D05G278500 Gossypium hirsutum HOM05D005791 ORTHO05D007452 4.6e-32 141.7 291 32.6
Hma1.2p1_0264F.1_g105800 Hydrangea macrophylla HOM05D005791 ORTHO05D007452 4.6e-32 141.7 300 32.7
arahy.Tifrunner.gnm1.ann1.PBP7IS Arachis hypogaea HOM05D005791 ORTHO05D007452 5.9e-32 141.4 315 33.7
Thhalv10006076m.g Eutrema salsugineum HOM05D005791 ORTHO05D007452 5.9e-32 141.4 289 33.2
Hund13427 Selenicereus undatus HOM05D005791 ORTHO05D007452 5.9e-32 141.4 300 32.7
Lsat_1_v5_gn_8_11160 Lactuca sativa HOM05D005791 ORTHO05D007452 7.8e-32 141.0 315 31.7
Gohir.A05G276800 Gossypium hirsutum HOM05D005791 ORTHO05D007452 1.0e-31 140.6 300 32.7
AUR62031667 Chenopodium quinoa HOM05D005791 ORTHO05D007452 1.3e-31 140.2 300 32.0
VMungo1309G2173 Vigna mungo HOM05D005791 ORTHO05D007452 1.7e-31 139.8 315 32.7
Phvul.009G041600 Phaseolus vulgaris HOM05D005791 ORTHO05D007452 3.9e-31 138.7 315 32.4
SalBow2G0183 Salvia bowleyana HOM05D005791 ORTHO05D007452 3.9e-31 138.7 293 32.4
vmacro06873 Vaccinium macrocarpon HOM05D005791 ORTHO05D007452 3.9e-31 138.7 308 31.8
Migut.F01222 Erythranthe guttata HOM05D005791 ORTHO05D007452 1.1e-30 137.1 300 32.3
unitig_736.g22425 Utricularia gibba HOM05D005791 ORTHO05D007452 1.9e-30 136.3 300 31.7
CAN.G77.10 Capsicum annuum HOM05D005791 ORTHO05D007452 3.3e-30 135.6 300 32.0
DCAR_014656 Daucus carota HOM05D005791 ORTHO05D007452 4.3e-30 135.2 300 31.3
BraA07t29959Z Brassica rapa HOM05D005791 ORTHO05D007452 9.5e-30 134.0 280 32.9
vmacro06874 Vaccinium macrocarpon HOM05D005791 ORTHO05D007452 1.2e-29 133.7 296 32.1
CsaV3_5G039240 Cucumis sativus L. HOM05D005791 ORTHO05D007452 1.6e-29 133.3 315 32.1
EL10Ac2g02691 Beta vulgaris HOM05D005791 ORTHO05D007452 2.1e-29 132.9 300 31.7
Cpa.g.sc1097.1 Carica papaya HOM05D005791 ORTHO05D007452 2.1e-29 132.9 105 60.0
ClCG11G005490 Citrullus lanatus HOM05D005791 ORTHO05D007452 2.1e-29 132.9 315 31.7
Gohir.A13G008400 Gossypium hirsutum HOM05D005791 ORTHO05D007452 4.7e-29 131.7 304 30.6
Zm00001eb070150 Zea mays HOM05D005791 ORTHO05D007452 4.7e-29 131.7 289 31.5
Sed0013812 Sechium edule HOM05D005791 ORTHO05D007452 1.4e-28 130.2 315 31.4
AUR62032550 Chenopodium quinoa HOM05D005791 ORTHO05D007452 6.8e-28 127.9 304 29.9
Os05g0313500 Oryza sativa ssp. japonica HOM05D005791 ORTHO05D007452 6.8e-28 127.9 311 29.6
HanXRQChr08g0222991 Helianthus annuus HOM05D005791 ORTHO05D007452 8.9e-28 127.5 315 30.5
Gorai.013G009900 Gossypium raimondii HOM05D005791 ORTHO05D007452 1.2e-27 127.1 315 29.5
Gohir.D13G009100 Gossypium hirsutum HOM05D005791 ORTHO05D007452 2.0e-27 126.3 315 29.5
MELO3C022102.2 Cucumis melo HOM05D005791 ORTHO05D007452 2.6e-27 125.9 315 31.1
SGA_v2.0_scaffold78G25489 Striga asiatica HOM05D005791 ORTHO05D007452 7.5e-27 124.4 297 31.3
Gohir.D13G009200 Gossypium hirsutum HOM05D005791 ORTHO05D007452 8.3e-26 120.9 105 54.3
AL5G37780 Arabidopsis lyrata HOM05D005791 ORTHO05D007452 1.9e-25 119.8 105 51.4
HanXRQChr05g0144231 Helianthus annuus HOM05D005791 ORTHO05D007452 2.7e-24 115.9 306 27.8
Hma1.2p1_0264F.1_g105810 Hydrangea macrophylla HOM05D005791 ORTHO05D034273 1.3e-23 113.6 81 64.2
DCAR_018050 Daucus carota HOM05D005791 ORTHO05D007452 6.6e-23 111.3 301 27.9
Mapoly0006s0302 Marchantia polymorpha HOM05D005791 ORTHO05D007452 8.6e-23 110.9 306 27.8
Dinv21869 Davidia involucrata HOM05D005791 ORTHO05D007452 1.9e-22 109.8 268 29.1
Nn2g10215 Nelumbo nucifera HOM05D005791 ORTHO05D007452 1.9e-22 109.8 273 29.3
ECA233G0423 Erigeron canadensis HOM05D005791 ORTHO05D007452 1.2e-21 107.1 306 26.8
Lsat_1_v5_gn_8_11180 Lactuca sativa HOM05D005791 ORTHO05D007452 1.8e-20 103.2 96 47.9
Peaxi162Scf00073g02117 Petunia axillaris HOM05D005791 ORTHO05D007452 1.5e-19 100.1 268 33.2
HanXRQChr08g0222851 Helianthus annuus HOM05D005791 ORTHO05D007452 7.5e-19 97.8 291 28.2
HPP92_024990 Vanilla planifolia HOM05D005791 ORTHO05D007452 1.7e-18 96.7 72 56.9
SMO164G0125 Selaginella moellendorffii HOM05D005791 ORTHO05D007452 8.3e-18 94.4 296 25.3
Pp3c16_1190 Physcomitrium patens HOM05D005791 ORTHO05D007452 1.9e-17 93.2 290 25.5
Oeu008099.1 Olea europaea HOM05D002347 ORTHO05D002969 4.6e-16 88.6 109 47.7
AagrBONN_evm.TU.Sc2ySwM_362.2815 Anthoceros agrestis HOM05D005791 ORTHO05D007452 6.0e-16 88.2 77 45.5
Ca_16850_v3 Cicer arietinum L. HOM05D005791 ORTHO05D007452 7.8e-16 87.8 128 43.8
Gohir.A13G008500 Gossypium hirsutum HOM05D005791 ORTHO05D007452 5.1e-15 85.1 300 25.0
Solyc03g095350.3 Solanum lycopersicum HOM05D005791 ORTHO05D034273 3.3e-14 82.4 54 61.1
MD11G1140100 Malus domestica HOM05D005791 ORTHO05D007452 3.4e-11 72.4 131 38.9
SEGI_06672 Sequoiadendron giganteum HOM05D005791 ORTHO05D007452 2.9e-10 69.3 117 36.8
CDE10G1308 Ceratophyllum demersum HOM05D005791 ORTHO05D007452 8.4e-10 67.8 107 39.3
Cre16.g674050 Chlamydomonas reinhardtii HOM05D005791 ORTHO05D007452 1.6e-08 63.5 99 29.3
PRCOL_00005743 Prasinoderma coloniale HOM05D005791 ORTHO05D007452 1.3e-07 60.5 89 34.8
SalBow5G4812 Salvia bowleyana HOM05D005791 ORTHO05D007452 1.7e-07 60.1 36 72.2
arahy.Tifrunner.gnm1.ann1.SC583Y Arachis hypogaea HOM05D000555 ORTHO05D000646 2.5e-06 56.2 44 59.1
arahy.Tifrunner.gnm1.ann1.5V94PQ Arachis hypogaea HOM05D005791 ORTHO05D008002 3.3e-06 55.8 40 62.5


User provided reference genes

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