Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1287 Ceratophyllum demersum HOM05D006441 ORTHO05D008203 3.5e-49 198.0 100 100.0
CDE07G0466 Ceratophyllum demersum HOM05D006441 ORTHO05D008203 3.0e-32 141.7 139 59.0
RcHm_v2.0_Chr2g0109061 Rosa chinensis HOM05D006441 ORTHO05D008203 4.2e-10 68.2 50 68.0
TAR628G0068 Trochodendron aralioides HOM05D006441 ORTHO05D008203 4.2e-10 68.2 51 66.7
Dinv23055 Davidia involucrata HOM05D006441 ORTHO05D008203 5.5e-10 67.8 49 69.4
RcHm_v2.0_Chr1g0321831 Rosa chinensis HOM05D006441 ORTHO05D008203 7.1e-10 67.4 50 66.0
GSVIVG01002450001 Vitis vinifera HOM05D006441 ORTHO05D008203 1.6e-09 66.2 48 64.6
GSVIVG01002709001 Vitis vinifera HOM05D006441 ORTHO05D008203 1.6e-09 66.2 48 64.6
Glyma.02G280500 Glycine max HOM05D006441 ORTHO05D008203 2.1e-09 65.9 55 61.8
Prupe.6G215400 Prunus persica HOM05D006441 ORTHO05D008203 1.0e-08 63.5 53 64.2
FAN19G0231 Fragaria x ananassa HOM05D006441 ORTHO05D008203 1.3e-08 63.2 50 62.0
PGR102G2456 Punica granatum HOM05D006441 ORTHO05D008203 1.3e-08 63.2 57 59.6
Manes.12G118300 Manihot esculenta HOM05D006441 ORTHO05D008203 2.3e-08 62.4 56 62.5
FvH4_1g18350 Fragaria vesca HOM05D006441 ORTHO05D008203 3.0e-08 62.0 50 60.0
Solyc02g092010.4 Solanum lycopersicum HOM05D006441 ORTHO05D008203 3.0e-08 62.0 77 42.9
Sopen02g036590 Solanum pennellii HOM05D006441 ORTHO05D008203 3.0e-08 62.0 77 42.9
Medtr5g089970 Medicago truncatula HOM05D006441 ORTHO05D008203 3.9e-08 61.6 57 56.1
ECA246G2498 Erigeron canadensis HOM05D006441 ORTHO05D008203 5.1e-08 61.2 47 63.8
Rhsim10G0094400 Rhododendron simsii HOM05D006441 ORTHO05D008203 5.1e-08 61.2 50 58.0
Cfa006781 Carpinus fangiana HOM05D006441 ORTHO05D008203 6.7e-08 60.8 57 57.9
Migut.H00320 Erythranthe guttata HOM05D006441 ORTHO05D008203 8.7e-08 60.5 49 61.2
MSTRG.23600 Avicennia marina HOM05D006441 ORTHO05D008203 1.1e-07 60.1 49 59.2
AUR62004040 Chenopodium quinoa HOM05D006441 ORTHO05D008203 1.1e-07 60.1 102 36.3
HanXRQChr12g0377011 Helianthus annuus HOM05D006441 ORTHO05D008203 1.1e-07 60.1 47 61.7
Lj4A166T80 Lonicera japonica HOM05D006441 ORTHO05D008203 1.1e-07 60.1 71 46.5
Nitab4.5_0000776g0060 Nicotiana tabacum HOM05D006441 ORTHO05D008203 1.1e-07 60.1 50 56.0
TPR.G19350 Trifolium pratense HOM05D006441 ORTHO05D008203 1.1e-07 60.1 57 56.1
vmacro05378 Vaccinium macrocarpon HOM05D006441 ORTHO05D008203 1.1e-07 60.1 50 58.0
Hund16422 Selenicereus undatus HOM05D006441 ORTHO05D008203 1.5e-07 59.7 58 58.6
Aqoxy6G02956 Aquilegia oxysepala HOM05D006441 ORTHO05D008203 1.9e-07 59.3 55 56.4
arahy.Tifrunner.gnm1.ann1.H9DIKV Arachis hypogaea HOM05D006441 ORTHO05D008203 1.9e-07 59.3 99 41.4
DCAR_010797 Daucus carota HOM05D006441 ORTHO05D008203 1.9e-07 59.3 72 44.4
AUR62007550 Chenopodium quinoa HOM05D006441 ORTHO05D008203 2.5e-07 58.9 97 37.1
Nitab4.5_0000142g0480 Nicotiana tabacum HOM05D006441 ORTHO05D008203 2.5e-07 58.9 50 54.0
arahy.Tifrunner.gnm1.ann1.FY2PML Arachis hypogaea HOM05D006441 ORTHO05D008203 3.3e-07 58.5 85 45.9
CSS0036817 Camellia sinensis var. sinensis HOM05D006441 ORTHO05D008203 3.3e-07 58.5 49 59.2
MD02G1190600 Malus domestica HOM05D006441 ORTHO05D008203 3.3e-07 58.5 53 58.5
SGA_v2.0_scaffold269G46276 Striga asiatica HOM05D006441 ORTHO05D008203 5.7e-07 57.8 63 52.4
Ah.03g140760 Amaranthus hybridus HOM05D006441 ORTHO05D008203 7.4e-07 57.4 55 52.7
CSS0047485 Camellia sinensis var. sinensis HOM05D006441 ORTHO05D008203 7.4e-07 57.4 49 59.2
Lalb_Chr14g0365131 Lupinus albus HOM05D006441 ORTHO05D008203 7.4e-07 57.4 54 59.3
Phvul.008G200200 Phaseolus vulgaris HOM05D006441 ORTHO05D008203 7.4e-07 57.4 55 60.0
PGSC0003DMG400021428 Solanum tuberosum HOM05D006441 ORTHO05D008203 7.4e-07 57.4 77 40.3
Nitab4.5_0001859g0070 Nicotiana tabacum HOM05D006441 ORTHO05D008203 9.6e-07 57.0 50 54.0
Sc16g0002790 Simmondsia chinensis HOM05D006441 ORTHO05D008203 1.3e-06 56.6 54 53.7
CAN.G1343.13 Capsicum annuum HOM05D006441 ORTHO05D008203 1.6e-06 56.2 49 55.1
CANSAT01G2205 Cannabis sativa HOM05D006441 ORTHO05D008203 2.1e-06 55.8 57 54.4
FAN23G0818 Fragaria x ananassa HOM05D006441 ORTHO05D008203 2.1e-06 55.8 40 65.0
FAN26G0165 Fragaria x ananassa HOM05D006441 ORTHO05D008203 2.8e-06 55.5 46 56.5
Actinidia36417 Actinidia chinensis HOM05D006441 ORTHO05D008203 3.7e-06 55.1 47 57.4
Lsat_1_v5_gn_3_85860 Lactuca sativa HOM05D006441 ORTHO05D008203 3.7e-06 55.1 37 70.3
TWI53G1431 Tripterygium wilfordii HOM05D006441 ORTHO05D008203 3.7e-06 55.1 56 51.8
CiPaw.07G037300 Carya illinoinensis HOM05D006441 ORTHO05D008203 4.8e-06 54.7 57 56.1
Duzib147G0493 Durio zibethinus HOM05D006441 ORTHO05D008203 4.8e-06 54.7 56 53.6
Peaxi162Scf00096g01848 Petunia axillaris HOM05D006441 ORTHO05D008203 4.8e-06 54.7 50 52.0
LjContig00049g0002658 Lotus japonicus HOM05D006441 ORTHO05D008203 8.2e-06 53.9 103 38.8


User provided reference genes

Program Settings