Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1285 Ceratophyllum demersum HOM05D004831 ORTHO05D003975 0.0e+00 1542.3 791 100.0
TAR374G0326 Trochodendron aralioides HOM05D004831 ORTHO05D003975 2.0e-75 288.1 816 31.5
TAR626G1756 Trochodendron aralioides HOM05D004831 ORTHO05D003975 2.0e-75 288.1 816 31.5
TAR383G0472 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.0e-66 259.2 829 29.8
MBI01_g10032_MAGBIO Magnolia biondii HOM05D004831 ORTHO05D003975 1.7e-66 258.5 777 30.1
Cfa002050 Carpinus fangiana HOM05D004831 ORTHO05D003975 8.9e-63 246.1 939 29.4
QL05p025363 Quercus lobata HOM05D004831 ORTHO05D003975 2.0e-62 245.0 821 29.5
Nn8g39278 Nelumbo nucifera HOM05D004831 ORTHO05D003975 3.7e-61 240.7 821 29.6
CSS0014524 Camellia sinensis var. sinensis HOM05D004831 ORTHO05D003975 4.9e-61 240.4 730 31.8
Dinv30528 Davidia involucrata HOM05D004831 ORTHO05D003975 3.5e-59 234.2 812 29.8
GSVIVG01017152001 Vitis vinifera HOM05D004831 ORTHO05D003975 1.3e-58 232.3 918 27.5
Actinidia01793 Actinidia chinensis HOM05D004831 ORTHO05D003975 2.9e-58 231.1 883 28.5
ClCG09G002300 Citrullus lanatus HOM05D004831 ORTHO05D003975 9.5e-57 226.1 820 28.9
MELO3C023366.2 Cucumis melo HOM05D004831 ORTHO05D003975 2.8e-56 224.6 830 28.4
Thecc.06G083000 Theobroma cacao HOM05D004831 ORTHO05D003975 4.7e-56 223.8 771 28.9
Cpa.g.sc10.161 Carica papaya HOM05D004831 ORTHO05D003975 1.0e-55 222.6 853 30.0
CsaV3_7G033010 Cucumis sativus L. HOM05D004831 ORTHO05D003975 1.4e-55 222.2 830 28.6
PGSC0003DMG400002560 Solanum tuberosum HOM05D004831 ORTHO05D003975 5.8e-54 216.9 827 27.9
CANSAT56G2043 Cannabis sativa HOM05D004831 ORTHO05D003975 2.2e-53 214.9 812 29.8
Sed0027172 Sechium edule HOM05D004831 ORTHO05D003975 4.9e-53 213.8 814 28.0
Prupe.3G073700 Prunus persica HOM05D004831 ORTHO05D003975 3.2e-52 211.1 821 28.0
Gohir.A10G079000 Gossypium hirsutum HOM05D004831 ORTHO05D003975 7.0e-52 209.9 799 29.7
Solyc03g120340.3 Solanum lycopersicum HOM05D004831 ORTHO05D003975 2.0e-51 208.4 811 27.1
vmacro18933 Vaccinium macrocarpon HOM05D004831 ORTHO05D003975 2.7e-51 208.0 750 30.1
Rhsim08G0218700 Rhododendron simsii HOM05D004831 ORTHO05D003975 6.0e-51 206.8 824 30.0
Hund06602 Selenicereus undatus HOM05D004831 ORTHO05D003975 6.0e-51 206.8 778 28.3
Ciclev10024870m.g Citrus clementina HOM05D004831 ORTHO05D003975 2.3e-50 204.9 881 27.9
TWI18G0228 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 3.9e-50 204.1 796 27.3
Potri.003G056600 Populus trichocarpa HOM05D004831 ORTHO05D003975 5.0e-50 203.8 823 28.6
TWI12G0693 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 6.6e-50 203.4 798 28.4
Gohir.A09G084100 Gossypium hirsutum HOM05D004831 ORTHO05D003975 1.5e-49 202.2 710 29.2
Gorai.011G078100 Gossypium raimondii HOM05D004831 ORTHO05D003975 2.5e-49 201.4 801 29.2
Sopen03g039230 Solanum pennellii HOM05D004831 ORTHO05D003975 2.5e-49 201.4 811 27.1
Glyma.15G013200 Glycine max HOM05D004831 ORTHO05D003975 4.7e-48 197.2 838 27.8
Potri.001G178200 Populus trichocarpa HOM05D004831 ORTHO05D003975 6.2e-48 196.8 805 28.1
Dinv38059 Davidia involucrata HOM05D004831 ORTHO05D003975 8.1e-48 196.4 801 28.2
Gohir.D09G083900 Gossypium hirsutum HOM05D004831 ORTHO05D003975 6.8e-47 193.4 723 29.5
Gohir.D10G072500 Gossypium hirsutum HOM05D004831 ORTHO05D003975 4.4e-46 190.7 802 28.7
Atru.chr1.3226 Acer truncatum HOM05D004831 ORTHO05D003975 5.8e-46 190.3 865 26.9
CAN.G438.52 Capsicum annuum HOM05D004831 ORTHO05D003975 5.8e-46 190.3 808 26.6
Manes.11G052100 Manihot esculenta HOM05D004831 ORTHO05D003975 5.8e-46 190.3 826 27.7
Aa31sc115G30 Aethionema arabicum HOM05D004831 ORTHO05D003975 2.2e-45 188.3 834 27.8
Eucgr.F03008 Eucalyptus grandis HOM05D004831 ORTHO05D003975 2.2e-45 188.3 803 28.4
Lj5A62T33 Lonicera japonica HOM05D004831 ORTHO05D003975 2.2e-45 188.3 719 28.9
Gorai.006G099900 Gossypium raimondii HOM05D004831 ORTHO05D003975 6.4e-45 186.8 722 28.7
Sabra03G0032100 Salix brachista HOM05D004831 ORTHO05D003975 4.1e-44 184.1 856 26.2
TPR.G31352 Trifolium pratense HOM05D004831 ORTHO05D003975 5.4e-44 183.7 835 26.5
Lsat_1_v5_gn_1_34820 Lactuca sativa HOM05D004831 ORTHO05D003975 1.2e-43 182.6 809 26.5
Sc15g0001240 Simmondsia chinensis HOM05D004831 ORTHO05D003975 1.6e-43 182.2 870 26.0
Peaxi162Scf00015g00247 Petunia axillaris HOM05D004831 ORTHO05D003975 6.0e-43 180.3 834 26.0
Glyma.13G360700 Glycine max HOM05D004831 ORTHO05D003975 7.8e-43 179.9 847 27.4
Aa31LG7G15290 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.7e-42 178.7 818 27.0
THA.LOC104812471 Tarenaya hassleriana HOM05D004831 ORTHO05D003975 3.9e-42 177.6 812 29.2
Ca_24215_v3 Cicer arietinum L. HOM05D004831 ORTHO05D003975 6.6e-42 176.8 827 26.8
EL10Ac9g21986 Beta vulgaris HOM05D004831 ORTHO05D003975 1.1e-41 176.0 810 26.0
PGR102G0340 Punica granatum HOM05D004831 ORTHO05D003975 1.1e-41 176.0 949 25.7
Lalb_Chr24g0395761 Lupinus albus HOM05D004831 ORTHO05D003975 1.5e-41 175.6 822 26.6
MD17G1197700 Malus domestica HOM05D004831 ORTHO05D003975 1.6e-40 172.2 753 27.5
arahy.Tifrunner.gnm1.ann1.5CE7DY Arachis hypogaea HOM05D004831 ORTHO05D003975 1.8e-39 168.7 715 27.8
RcHm_v2.0_Chr2g0137511 Rosa chinensis HOM05D004831 ORTHO05D003975 1.8e-39 168.7 757 26.8
Medtr8g467560 Medicago truncatula HOM05D004831 ORTHO05D003975 1.2e-38 166.0 801 27.7
Duzib160G0042 Durio zibethinus HOM05D004831 ORTHO05D003975 2.0e-38 165.2 717 27.9
Oeu021950.1 Olea europaea HOM05D004831 ORTHO05D003975 5.8e-38 163.7 810 26.4
HanXRQChr05g0163461 Helianthus annuus HOM05D004831 ORTHO05D003975 9.9e-38 162.9 785 26.1
Phvul.005G172500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 2.2e-37 161.8 831 26.1
Aqoxy7G01849 Aquilegia oxysepala HOM05D004831 ORTHO05D003975 3.7e-37 161.0 813 25.7
Lj3g0022365 Lotus japonicus HOM05D004831 ORTHO05D003975 3.7e-37 161.0 813 26.0
Actinidia15826 Actinidia chinensis HOM05D004831 ORTHO05D003975 6.4e-37 160.2 380 33.9
CiPaw.02G152200 Carya illinoinensis HOM05D004831 ORTHO05D003975 8.4e-37 159.8 381 34.4
AUR62011616 Chenopodium quinoa HOM05D004831 ORTHO05D003975 8.4e-37 159.8 722 26.9
MSTRG.22702 Avicennia marina HOM05D004831 ORTHO05D003975 4.1e-36 157.5 797 26.0
CARHR016160 Cardamine hirsuta HOM05D004831 ORTHO05D003975 7.1e-36 156.8 801 26.3
Duzib235G0180 Durio zibethinus HOM05D004831 ORTHO05D003975 9.2e-36 156.4 778 27.2
PSO782G5420 Papaver somniferum HOM05D004831 ORTHO05D003975 9.2e-36 156.4 947 25.1
Ah.01g021180 Amaranthus hybridus HOM05D004831 ORTHO05D003975 2.1e-35 155.2 816 25.4
Medtr6g068960 Medicago truncatula HOM05D004831 ORTHO05D003975 1.3e-34 152.5 738 27.2
HanXRQChr02g0032681 Helianthus annuus HOM05D004831 ORTHO05D003975 1.7e-34 152.1 814 26.8
Nitab4.5_0003159g0050 Nicotiana tabacum HOM05D004831 ORTHO05D003975 2.3e-34 151.8 858 25.3
Hma1.2p1_0682F.1_g202670 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 5.1e-34 150.6 701 26.7
Hma1.2p1_2171F.1_g315970 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 6.6e-34 150.2 824 25.5
ATR0037G028 Amborella trichopoda HOM05D004831 ORTHO05D003975 1.1e-33 149.4 812 26.8
PSO063G2677 Papaver somniferum HOM05D004831 ORTHO05D003975 1.5e-33 149.1 971 24.8
arahy.Tifrunner.gnm1.ann1.3B4S3M Arachis hypogaea HOM05D004831 ORTHO05D003975 2.5e-33 148.3 726 26.3
arahy.Tifrunner.gnm1.ann1.Y8U4CK Arachis hypogaea HOM05D004831 ORTHO05D003975 3.3e-33 147.9 731 26.5
Cc04_g03580 Coffea canephora HOM05D004831 ORTHO05D003975 2.8e-32 144.8 765 24.8
Nitab4.5_0003885g0040 Nicotiana tabacum HOM05D004831 ORTHO05D003975 3.6e-32 144.4 850 24.4
arahy.Tifrunner.gnm1.ann1.NQW8T9 Arachis hypogaea HOM05D004831 ORTHO05D003975 5.2e-31 140.6 827 25.3
Sed0009949 Sechium edule HOM05D004831 ORTHO05D003975 8.9e-31 139.8 639 27.7
Lalb_Chr15g0078831 Lupinus albus HOM05D004831 ORTHO05D003975 2.0e-30 138.7 755 26.6
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 2.6e-30 138.3 334 32.6
Os01g0617700 Oryza sativa ssp. japonica HOM05D004831 ORTHO05D003975 3.4e-30 137.9 869 24.3
AUR62016432 Chenopodium quinoa HOM05D004831 ORTHO05D003975 9.9e-30 136.3 705 25.1
Sp1g13970 Schrenkiella parvula HOM05D004831 ORTHO05D003975 1.7e-29 135.6 811 24.8
FAN09G2060 Fragaria x ananassa HOM05D004831 ORTHO05D003975 2.9e-29 134.8 756 25.3
FAN14G0810 Fragaria x ananassa HOM05D004831 ORTHO05D003975 4.9e-29 134.0 761 25.9
FvH4_6g30920 Fragaria vesca HOM05D004831 ORTHO05D003975 1.2e-27 129.4 764 26.2
Haze_16453 Corylus avellana HOM05D004831 ORTHO05D003975 2.7e-27 128.3 595 27.6
Hma1.2p1_0323F.1_g125270 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 3.9e-26 124.4 787 24.3
TAR624G1194 Trochodendron aralioides HOM05D004831 ORTHO05D003975 5.1e-26 124.0 190 43.2
Lsat_1_v5_gn_9_45780 Lactuca sativa HOM05D004831 ORTHO05D003975 8.7e-26 123.2 711 26.2
BraA06t24347Z Brassica rapa HOM05D004831 ORTHO05D003975 4.3e-25 120.9 808 24.0
ECA247G1173 Erigeron canadensis HOM05D004831 ORTHO05D003975 4.3e-25 120.9 779 24.6
BcaC05g25641 Brassica carinata HOM05D004831 ORTHO05D003975 7.3e-25 120.2 803 25.0
A06p11680 Brassica napus HOM05D004831 ORTHO05D003975 4.8e-24 117.5 91 63.7
C05p13810 Brassica napus HOM05D004831 ORTHO05D012057 6.2e-24 117.1 86 66.3
BolC5t30118H Brassica oleracea HOM05D004831 ORTHO05D003975 6.2e-24 117.1 86 66.3
Oeu024063.2 Olea europaea HOM05D004831 ORTHO05D003975 8.1e-24 116.7 346 30.3
Actinidia15827 Actinidia chinensis HOM05D004831 ORTHO05D003975 1.1e-23 116.3 359 32.9
AT1G15660 Arabidopsis thaliana HOM05D004831 ORTHO05D003975 1.4e-23 115.9 813 25.3
COL.COLO4_30333 Corchorus olitorius HOM05D004831 ORTHO05D003975 2.4e-23 115.2 90 64.4
BcaC05g25510 Brassica carinata HOM05D004831 ORTHO05D003975 4.0e-23 114.4 88 64.8
Migut.I00846 Erythranthe guttata HOM05D004831 ORTHO05D003975 2.6e-22 111.7 350 28.3
HPP92_017895 Vanilla planifolia HOM05D004831 ORTHO05D003975 2.6e-22 111.7 103 56.3
Phvul.002G299500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 7.6e-22 110.2 701 24.4
FAN02G3038 Fragaria x ananassa HOM05D004831 ORTHO05D003975 2.9e-21 108.2 657 25.9
DCAR_026304 Daucus carota HOM05D004831 ORTHO05D003975 1.1e-20 106.3 329 30.7
AL1G27760 Arabidopsis lyrata HOM05D004831 ORTHO05D003975 5.4e-20 104.0 817 24.1
SGA_v2.0_scaffold37G14809 Striga asiatica HOM05D004831 ORTHO05D003975 5.4e-20 104.0 784 24.0
AagrBONN_evm.TU.Sc2ySwM_368.483__484 Anthoceros agrestis HOM05D004831 ORTHO05D003975 4.6e-19 100.9 128 46.9
SHI09311 Sapria himalayana HOM05D004831 ORTHO05D003975 4.6e-19 100.9 111 48.6
Thhalv10006918m.g Eutrema salsugineum HOM05D004831 ORTHO05D003975 5.1e-18 97.4 819 23.8
Mapoly0008s0161 Marchantia polymorpha HOM05D004831 ORTHO05D003975 2.5e-17 95.1 117 47.9
Carub.0001s1544 Capsella rubella HOM05D004831 ORTHO05D003975 5.6e-17 94.0 761 23.7
Zm00001eb358290 Zea mays HOM05D018572 ORTHO05D003975 5.6e-17 94.0 87 57.5
Zm00001eb159780 Zea mays HOM05D018572 ORTHO05D003975 1.3e-16 92.8 126 41.3
TPR.G24077 Trifolium pratense HOM05D004831 ORTHO05D003975 6.2e-16 90.5 161 42.2
Aa31LG7G300 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.8e-15 89.0 651 23.5
SEGI_34595 Sequoiadendron giganteum HOM05D004831 ORTHO05D003975 1.8e-15 89.0 57 73.7
Psat4g139520 Pisum sativum HOM05D004831 ORTHO05D003975 3.1e-15 88.2 576 24.8
SMO203G0255 Selaginella moellendorffii HOM05D004831 ORTHO05D003975 2.6e-14 85.1 83 49.4
DCAR_009558 Daucus carota HOM05D004831 ORTHO05D003975 5.8e-14 84.0 306 29.1
Pp3c2_32580 Physcomitrium patens HOM05D004831 ORTHO05D003975 9.9e-14 83.2 174 33.9
Migut.I00847 Erythranthe guttata HOM05D004831 ORTHO05D003975 6.4e-13 80.5 108 45.4
unitig_62.g23772 Utricularia gibba HOM05D004831 ORTHO05D003975 6.4e-13 80.5 807 22.3
Pp3c5_11060 Physcomitrium patens HOM05D004831 ORTHO05D003975 3.5e-11 74.7 84 44.0
Duzib192G1036 Durio zibethinus HOM05D004831 ORTHO05D003975 2.3e-10 72.0 295 29.5
MD09G1215000 Malus domestica HOM05D004831 ORTHO05D003975 1.1e-09 69.7 130 33.1
SEGI_32006 Sequoiadendron giganteum HOM05D004831 ORTHO05D015318 1.5e-09 69.3 62 64.5
ClCG05G013830 Citrullus lanatus HOM05D004831 ORTHO05D003975 2.5e-09 68.6 403 25.1
Manes.04G121450 Manihot esculenta HOM05D004831 ORTHO05D003975 1.1e-07 63.2 506 22.7
Cre02.g079250 Chlamydomonas reinhardtii HOM05D004831 ORTHO05D003975 1.4e-07 62.8 62 51.6


User provided reference genes

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